Protein–RNA interactions for Protein: Q8IZC6

COL27A1, Collagen alpha-1(XXVII) chain, humanhuman

Predicted RBP Predictions only

Length 1,860 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL27A1Q8IZC6 PRSS22-201ENST00000161006 1386 ntAPPRIS P1 TSL 1 (best) BASIC22.28■■□□□ 1.16
COL27A1Q8IZC6 CRACR2B-202ENST00000525077 1578 ntAPPRIS P1 TSL 1 (best) BASIC22.28■■□□□ 1.16
COL27A1Q8IZC6 FZD2-201ENST00000315323 2112 ntAPPRIS P1 BASIC22.28■■□□□ 1.16
COL27A1Q8IZC6 IHH-201ENST00000295731 2023 ntAPPRIS P1 TSL 1 (best) BASIC22.28■■□□□ 1.16
COL27A1Q8IZC6 IKBKG-211ENST00000615874 1460 ntTSL 5 BASIC22.28■■□□□ 1.16
COL27A1Q8IZC6 IKBKG-215ENST00000619941 1463 ntTSL 5 BASIC22.28■■□□□ 1.16
COL27A1Q8IZC6 AC131274.2-201ENST00000580697 1507 ntBASIC22.27■■□□□ 1.16
COL27A1Q8IZC6 C19orf12-204ENST00000392276 1912 ntTSL 1 (best) BASIC22.27■■□□□ 1.16
COL27A1Q8IZC6 PKM-203ENST00000389093 2279 ntTSL 5 BASIC22.27■■□□□ 1.16
COL27A1Q8IZC6 CCDC107-203ENST00000378407 899 ntAPPRIS ALT2 TSL 2 BASIC22.27■■□□□ 1.16
COL27A1Q8IZC6 MEIS1-AS3-201ENST00000454167 707 ntTSL 4 BASIC22.27■■□□□ 1.16
COL27A1Q8IZC6 AP001330.3-201ENST00000520123 633 ntBASIC22.27■■□□□ 1.16
COL27A1Q8IZC6 TP53I3-201ENST00000238721 1998 ntAPPRIS P1 TSL 1 (best) BASIC22.27■■□□□ 1.16
COL27A1Q8IZC6 GMPPB-202ENST00000308388 1582 ntAPPRIS P1 TSL 1 (best) BASIC22.27■■□□□ 1.16
COL27A1Q8IZC6 SYT8-201ENST00000341958 1556 ntAPPRIS ALT2 TSL 5 BASIC22.27■■□□□ 1.16
COL27A1Q8IZC6 GATM-206ENST00000558336 1522 ntTSL 2 BASIC22.26■■□□□ 1.15
COL27A1Q8IZC6 ECHDC1-203ENST00000368291 1354 ntTSL 2 BASIC22.26■■□□□ 1.15
COL27A1Q8IZC6 STEAP2-207ENST00000402625 1372 ntTSL 5 BASIC22.26■■□□□ 1.15
COL27A1Q8IZC6 EDA-201ENST00000338901 1233 ntBASIC22.26■■□□□ 1.15
COL27A1Q8IZC6 VAMP2-204ENST00000488857 874 ntAPPRIS ALT1 TSL 3 BASIC22.26■■□□□ 1.15
COL27A1Q8IZC6 RASSF5-204ENST00000580449 1932 ntTSL 1 (best) BASIC22.25■■□□□ 1.15
COL27A1Q8IZC6 MAD2L2-201ENST00000235310 1860 ntAPPRIS P1 TSL 2 BASIC22.25■■□□□ 1.15
COL27A1Q8IZC6 C1QTNF12-201ENST00000330388 1036 ntAPPRIS P1 TSL 1 (best) BASIC22.25■■□□□ 1.15
COL27A1Q8IZC6 PTMA-205ENST00000410064 814 ntTSL 2 BASIC22.25■■□□□ 1.15
COL27A1Q8IZC6 AC105265.2-201ENST00000467189 838 ntBASIC22.25■■□□□ 1.15
COL27A1Q8IZC6 SERINC5-203ENST00000509193 1441 ntTSL 1 (best) BASIC22.24■■□□□ 1.15
COL27A1Q8IZC6 AC004448.1-201ENST00000458332 883 ntBASIC22.24■■□□□ 1.15
COL27A1Q8IZC6 CREB3L3-205ENST00000602257 1475 ntAPPRIS ALT2 TSL 1 (best) BASIC22.24■■□□□ 1.15
COL27A1Q8IZC6 RAB3IL1-202ENST00000394836 2284 ntAPPRIS P1 TSL 1 (best) BASIC22.24■■□□□ 1.15
COL27A1Q8IZC6 TMEM104-205ENST00000582773 1740 ntTSL 2 BASIC22.24■■□□□ 1.15
COL27A1Q8IZC6 ANKS3-204ENST00000585773 1946 ntTSL 2 BASIC22.24■■□□□ 1.15
COL27A1Q8IZC6 TRIM14-203ENST00000375098 1792 ntAPPRIS P1 TSL 2 BASIC22.24■■□□□ 1.15
COL27A1Q8IZC6 HMCES-204ENST00000502878 1952 ntAPPRIS P1 TSL 1 (best) BASIC22.24■■□□□ 1.15
COL27A1Q8IZC6 CROT-202ENST00000412227 1213 ntTSL 1 (best) BASIC22.24■■□□□ 1.15
COL27A1Q8IZC6 SMIM29-205ENST00000468145 903 ntTSL 2 BASIC22.24■■□□□ 1.15
COL27A1Q8IZC6 SMIM29-207ENST00000481533 1053 ntAPPRIS P1 TSL 1 (best) BASIC22.24■■□□□ 1.15
COL27A1Q8IZC6 CCDC189-211ENST00000545825 1046 ntTSL 1 (best) BASIC22.24■■□□□ 1.15
COL27A1Q8IZC6 CAPNS1-205ENST00000588780 1035 ntAPPRIS ALT2 TSL 5 BASIC22.24■■□□□ 1.15
COL27A1Q8IZC6 AUH-201ENST00000303617 1490 ntTSL 1 (best) BASIC22.23■■□□□ 1.15
COL27A1Q8IZC6 CHAC1-201ENST00000444189 1204 ntTSL 1 (best) BASIC22.23■■□□□ 1.15
COL27A1Q8IZC6 SERF1A-202ENST00000354833 1889 ntTSL 1 (best) BASIC22.23■■□□□ 1.15
COL27A1Q8IZC6 SERF1B-201ENST00000380750 1889 ntTSL 1 (best) BASIC22.23■■□□□ 1.15
COL27A1Q8IZC6 SCCPDH-201ENST00000366510 2503 ntAPPRIS P1 TSL 1 (best) BASIC22.23■■□□□ 1.15
COL27A1Q8IZC6 GADD45A-202ENST00000370986 1496 ntAPPRIS P1 TSL 1 (best) BASIC22.22■■□□□ 1.15
COL27A1Q8IZC6 BIN1-211ENST00000409400 2143 ntTSL 1 (best) BASIC22.22■■□□□ 1.15
COL27A1Q8IZC6 AC112229.4-201ENST00000488671 1528 ntTSL 2 BASIC22.22■■□□□ 1.15
COL27A1Q8IZC6 MIR939-201ENST00000401314 82 ntBASIC22.22■■□□□ 1.15
COL27A1Q8IZC6 AF213884.3-201ENST00000563833 479 ntBASIC22.22■■□□□ 1.15
COL27A1Q8IZC6 NKAIN3-202ENST00000523211 1988 ntAPPRIS P1 TSL 2 BASIC22.22■■□□□ 1.15
COL27A1Q8IZC6 LLGL2-202ENST00000375227 1374 ntTSL 1 (best) BASIC22.22■■□□□ 1.15
COL27A1Q8IZC6 DAZAP1-202ENST00000336761 2290 ntTSL 5 BASIC22.22■■□□□ 1.15
COL27A1Q8IZC6 HADH-203ENST00000505878 1719 ntTSL 1 (best) BASIC22.21■■□□□ 1.15
COL27A1Q8IZC6 ATP10A-207ENST00000619904 988 ntTSL 5 BASIC22.21■■□□□ 1.15
COL27A1Q8IZC6 WFDC1-201ENST00000219454 1534 ntAPPRIS P1 TSL 1 (best) BASIC22.21■■□□□ 1.15
COL27A1Q8IZC6 RTN2-208ENST00000590526 2357 ntTSL 5 BASIC22.21■■□□□ 1.15
COL27A1Q8IZC6 HSPE1-203ENST00000409729 478 ntTSL 2 BASIC22.2■■□□□ 1.14
COL27A1Q8IZC6 RCE1-202ENST00000524506 1379 ntTSL 5 BASIC22.2■■□□□ 1.14
COL27A1Q8IZC6 LCNL1-201ENST00000408973 1839 ntAPPRIS P1 TSL 2 BASIC22.2■■□□□ 1.14
COL27A1Q8IZC6 MATK-204ENST00000585778 1994 ntAPPRIS ALT2 TSL 1 (best) BASIC22.2■■□□□ 1.14
COL27A1Q8IZC6 ZNF775-201ENST00000329630 2257 ntAPPRIS P1 TSL 1 (best) BASIC22.2■■□□□ 1.14
COL27A1Q8IZC6 NAA38-201ENST00000333775 999 ntTSL 1 (best) BASIC22.2■■□□□ 1.14
COL27A1Q8IZC6 ACYP2-202ENST00000394666 993 ntAPPRIS P1 TSL 1 (best) BASIC22.2■■□□□ 1.14
COL27A1Q8IZC6 ZNF641-205ENST00000547026 1823 ntAPPRIS P1 TSL 1 (best) BASIC22.2■■□□□ 1.14
COL27A1Q8IZC6 ARHGDIA-217ENST00000584461 886 ntTSL 2 BASIC22.2■■□□□ 1.14
COL27A1Q8IZC6 B3GALT4-204ENST00000451237 1694 ntAPPRIS P1 BASIC22.19■■□□□ 1.14
COL27A1Q8IZC6 PRADC1-201ENST00000258083 1083 ntAPPRIS P1 TSL 1 (best) BASIC22.19■■□□□ 1.14
COL27A1Q8IZC6 SDHAP1-204ENST00000427415 559 ntTSL 4 BASIC22.19■■□□□ 1.14
COL27A1Q8IZC6 YJEFN3-201ENST00000436027 878 ntAPPRIS P1 TSL 1 (best) BASIC22.19■■□□□ 1.14
COL27A1Q8IZC6 WDR86-AS1-204ENST00000489632 751 ntTSL 3 BASIC22.19■■□□□ 1.14
COL27A1Q8IZC6 DUSP22-214ENST00000605315 867 ntTSL 5 BASIC22.19■■□□□ 1.14
COL27A1Q8IZC6 CKB-201ENST00000348956 1709 ntAPPRIS P1 TSL 1 (best) BASIC22.19■■□□□ 1.14
COL27A1Q8IZC6 SCARA5-204ENST00000524352 1945 ntTSL 1 (best) BASIC22.18■■□□□ 1.14
COL27A1Q8IZC6 LBX2-202ENST00000377566 1186 ntAPPRIS P1 TSL 1 (best) BASIC22.18■■□□□ 1.14
COL27A1Q8IZC6 TYROBP-203ENST00000544690 522 ntTSL 1 (best) BASIC22.18■■□□□ 1.14
COL27A1Q8IZC6 GRAMD4P4-201ENST00000613563 1115 ntBASIC22.18■■□□□ 1.14
COL27A1Q8IZC6 DNMT3A-206ENST00000406659 1775 ntTSL 1 (best) BASIC22.18■■□□□ 1.14
COL27A1Q8IZC6 LAMTOR1-201ENST00000278671 1179 ntAPPRIS P1 TSL 1 (best) BASIC22.17■■□□□ 1.14
COL27A1Q8IZC6 FGF8-204ENST00000347978 823 ntTSL 1 (best) BASIC22.17■■□□□ 1.14
COL27A1Q8IZC6 AC104564.3-201ENST00000582367 638 ntBASIC22.17■■□□□ 1.14
COL27A1Q8IZC6 ZNF264-206ENST00000600531 774 ntTSL 2 BASIC22.17■■□□□ 1.14
COL27A1Q8IZC6 AL136967.2-201ENST00000623968 743 ntBASIC22.17■■□□□ 1.14
COL27A1Q8IZC6 PICK1-201ENST00000356976 2055 ntAPPRIS P1 TSL 1 (best) BASIC22.17■■□□□ 1.14
COL27A1Q8IZC6 CDH24-206ENST00000610348 2037 ntTSL 1 (best) BASIC22.17■■□□□ 1.14
COL27A1Q8IZC6 ZNF32-202ENST00000395797 1201 ntAPPRIS P1 TSL 2 BASIC22.17■■□□□ 1.14
COL27A1Q8IZC6 AC092902.2-206ENST00000625484 846 ntTSL 5 BASIC22.17■■□□□ 1.14
COL27A1Q8IZC6 SDSL-201ENST00000345635 1397 ntAPPRIS P1 TSL 1 (best) BASIC22.16■■□□□ 1.14
COL27A1Q8IZC6 DRAM2-211ENST00000539140 1883 ntAPPRIS P1 TSL 1 (best) BASIC22.16■■□□□ 1.14
COL27A1Q8IZC6 SHISA5-201ENST00000296444 2369 ntTSL 1 (best) BASIC22.16■■□□□ 1.14
COL27A1Q8IZC6 KAT8-206ENST00000543774 1846 ntAPPRIS P1 TSL 5 BASIC22.16■■□□□ 1.14
COL27A1Q8IZC6 TMEM147-203ENST00000392205 767 ntTSL 2 BASIC22.16■■□□□ 1.14
COL27A1Q8IZC6 PTCHD3P2-201ENST00000424937 1205 ntBASIC22.16■■□□□ 1.14
COL27A1Q8IZC6 NAA30-202ENST00000554703 795 ntTSL 1 (best) BASIC22.16■■□□□ 1.14
COL27A1Q8IZC6 TGFBR3L-202ENST00000565886 1260 ntAPPRIS P1 TSL 5 BASIC22.16■■□□□ 1.14
COL27A1Q8IZC6 TMEM170A-206ENST00000569276 609 ntTSL 2 BASIC22.16■■□□□ 1.14
COL27A1Q8IZC6 AC018413.1-201ENST00000581996 1200 ntTSL 2 BASIC22.16■■□□□ 1.14
COL27A1Q8IZC6 RINL-202ENST00000591812 1910 ntAPPRIS ALT2 TSL 2 BASIC22.15■■□□□ 1.14
COL27A1Q8IZC6 BAD-203ENST00000394532 1157 ntAPPRIS P1 TSL 1 (best) BASIC22.15■■□□□ 1.14
COL27A1Q8IZC6 AC116614.1-201ENST00000456949 539 ntTSL 2 BASIC22.15■■□□□ 1.14
COL27A1Q8IZC6 CCND3-223ENST00000616010 2047 ntTSL 5 BASIC22.15■■□□□ 1.14
COL27A1Q8IZC6 PYGO2-201ENST00000368456 1306 ntTSL 2 BASIC22.15■■□□□ 1.14
Retrieved 100 of 98,524 protein–RNA pairs in 13.9 ms