Protein–RNA interactions for Protein: Q8IY21

DDX60, Probable ATP-dependent RNA helicase DDX60, humanhuman

Known RBP Predictions only

Length 1,712 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DDX60Q8IY21 KAT8-206ENST00000543774 1846 ntAPPRIS P1 TSL 5 BASIC29.11■■■□□ 2.25
DDX60Q8IY21 C7orf49-203ENST00000430372 1579 ntTSL 5 BASIC29.11■■■□□ 2.25
DDX60Q8IY21 PCGF3-202ENST00000400151 1175 ntTSL 2 BASIC29.11■■■□□ 2.25
DDX60Q8IY21 POLR2F-211ENST00000488684 564 ntTSL 2 BASIC29.11■■■□□ 2.25
DDX60Q8IY21 RAB40C-204ENST00000538492 2569 ntAPPRIS P1 TSL 2 BASIC29.11■■■□□ 2.25
DDX60Q8IY21 HADH-203ENST00000505878 1719 ntTSL 1 (best) BASIC29.1■■■□□ 2.25
DDX60Q8IY21 HES4-201ENST00000304952 899 ntAPPRIS P1 TSL 1 (best) BASIC29.09■■■□□ 2.25
DDX60Q8IY21 PRICKLE4-201ENST00000394259 939 ntAPPRIS ALT2 TSL 5 BASIC29.09■■■□□ 2.25
DDX60Q8IY21 KRTAP5-4-202ENST00000616115 660 ntAPPRIS ALT2 TSL 5 BASIC29.09■■■□□ 2.25
DDX60Q8IY21 SERINC5-203ENST00000509193 1441 ntTSL 1 (best) BASIC29.09■■■□□ 2.25
DDX60Q8IY21 BTBD6-203ENST00000392554 2176 ntAPPRIS P2 TSL 1 (best) BASIC29.09■■■□□ 2.25
DDX60Q8IY21 CCND3-223ENST00000616010 2047 ntTSL 5 BASIC29.09■■■□□ 2.25
DDX60Q8IY21 SHISA9-205ENST00000639941 1135 ntAPPRIS ALT2 TSL 5 BASIC29.08■■■□□ 2.25
DDX60Q8IY21 AC131274.2-201ENST00000580697 1507 ntBASIC29.08■■■□□ 2.24
DDX60Q8IY21 GNAL-201ENST00000269162 1722 ntAPPRIS P1 TSL 2 BASIC29.07■■■□□ 2.24
DDX60Q8IY21 PRKAR1B-203ENST00000403562 1917 ntAPPRIS P1 TSL 1 (best) BASIC29.07■■■□□ 2.24
DDX60Q8IY21 DLX2-202ENST00000466293 1852 ntTSL 2 BASIC29.07■■■□□ 2.24
DDX60Q8IY21 HOXA11-AS1_1.1-201ENST00000613939 98 ntBASIC29.07■■■□□ 2.24
DDX60Q8IY21 MIR6722-201ENST00000617286 78 ntBASIC29.07■■■□□ 2.24
DDX60Q8IY21 TMEM121-202ENST00000431372 1519 ntAPPRIS P1 TSL 5 BASIC29.07■■■□□ 2.24
DDX60Q8IY21 ELOC-206ENST00000520242 1573 ntAPPRIS P1 TSL 1 (best) BASIC29.07■■■□□ 2.24
DDX60Q8IY21 C19orf12-204ENST00000392276 1912 ntTSL 1 (best) BASIC29.06■■■□□ 2.24
DDX60Q8IY21 MATK-204ENST00000585778 1994 ntAPPRIS ALT2 TSL 1 (best) BASIC29.06■■■□□ 2.24
DDX60Q8IY21 RABEP2-203ENST00000544477 1645 ntTSL 2 BASIC29.05■■■□□ 2.24
DDX60Q8IY21 GADD45A-202ENST00000370986 1496 ntAPPRIS P1 TSL 1 (best) BASIC29.05■■■□□ 2.24
DDX60Q8IY21 MAST4-205ENST00000406039 717 ntTSL 1 (best) BASIC29.05■■■□□ 2.24
DDX60Q8IY21 RALB-203ENST00000420510 1252 ntAPPRIS P1 TSL 2 BASIC29.05■■■□□ 2.24
DDX60Q8IY21 SENP3-201ENST00000321337 2611 ntAPPRIS P1 TSL 1 (best) BASIC29.05■■■□□ 2.24
DDX60Q8IY21 NKX6-3-201ENST00000518699 1352 ntAPPRIS P1 TSL 5 BASIC29.05■■■□□ 2.24
DDX60Q8IY21 RBMXL2-201ENST00000306904 1874 ntAPPRIS P1 BASIC29.04■■■□□ 2.24
DDX60Q8IY21 CNPY3-202ENST00000394142 954 ntTSL 5 BASIC29.04■■■□□ 2.24
DDX60Q8IY21 SSR2-210ENST00000480567 895 ntAPPRIS P1 TSL 2 BASIC29.04■■■□□ 2.24
DDX60Q8IY21 ZNF584-205ENST00000596281 575 ntTSL 2 BASIC29.04■■■□□ 2.24
DDX60Q8IY21 SUMF1-202ENST00000383843 1447 ntTSL 2 BASIC29.04■■■□□ 2.24
DDX60Q8IY21 CBR3-201ENST00000290354 1169 ntAPPRIS P1 TSL 1 (best) BASIC29.03■■■□□ 2.24
DDX60Q8IY21 MIR6089-201ENST00000616698 64 ntBASIC29.03■■■□□ 2.24
DDX60Q8IY21 IKBKG-211ENST00000615874 1460 ntTSL 5 BASIC29.03■■■□□ 2.24
DDX60Q8IY21 IKBKG-215ENST00000619941 1463 ntTSL 5 BASIC29.03■■■□□ 2.24
DDX60Q8IY21 MFSD7-202ENST00000347950 1599 ntTSL 2 BASIC29.03■■■□□ 2.24
DDX60Q8IY21 E2F5-202ENST00000416274 1728 ntAPPRIS P4 TSL 1 (best) BASIC29.03■■■□□ 2.24
DDX60Q8IY21 WFDC1-201ENST00000219454 1534 ntAPPRIS P1 TSL 1 (best) BASIC29.03■■■□□ 2.24
DDX60Q8IY21 PPP1R14A-205ENST00000591585 949 ntTSL 2 BASIC29.03■■■□□ 2.24
DDX60Q8IY21 PTPMT1-205ENST00000534775 1611 ntTSL 1 (best) BASIC29.01■■■□□ 2.24
DDX60Q8IY21 AUH-201ENST00000303617 1490 ntTSL 1 (best) BASIC29.01■■■□□ 2.24
DDX60Q8IY21 CRYAA-201ENST00000291554 1139 ntAPPRIS P1 TSL 1 (best) BASIC29.01■■■□□ 2.23
DDX60Q8IY21 KRTAP5-4-201ENST00000399682 1181 ntAPPRIS P5 BASIC29.01■■■□□ 2.23
DDX60Q8IY21 PDPK1-204ENST00000441549 1729 ntTSL 1 (best) BASIC29.01■■■□□ 2.23
DDX60Q8IY21 STEAP2-207ENST00000402625 1372 ntTSL 5 BASIC29.01■■■□□ 2.23
DDX60Q8IY21 DUSP8P4-201ENST00000399538 1761 ntBASIC29■■■□□ 2.23
DDX60Q8IY21 PSKH1-202ENST00000570631 1509 ntTSL 1 (best) BASIC29■■■□□ 2.23
DDX60Q8IY21 SLC9A3R2-201ENST00000424542 2194 ntAPPRIS P1 TSL 1 (best) BASIC29■■■□□ 2.23
DDX60Q8IY21 AC136475.3-202ENST00000534742 812 ntTSL 2 BASIC29■■■□□ 2.23
DDX60Q8IY21 CKB-201ENST00000348956 1709 ntAPPRIS P1 TSL 1 (best) BASIC28.99■■■□□ 2.23
DDX60Q8IY21 YTHDF1-201ENST00000370334 747 ntTSL 3 BASIC28.99■■■□□ 2.23
DDX60Q8IY21 AC004448.1-201ENST00000458332 883 ntBASIC28.99■■■□□ 2.23
DDX60Q8IY21 FCRLB-205ENST00000367948 1977 ntAPPRIS P1 TSL 1 (best) BASIC28.99■■■□□ 2.23
DDX60Q8IY21 REST-212ENST00000640343 1352 ntTSL 1 (best) BASIC28.98■■■□□ 2.23
DDX60Q8IY21 FBXL8-201ENST00000258200 1658 ntAPPRIS P1 TSL 1 (best) BASIC28.98■■■□□ 2.23
DDX60Q8IY21 UBL7-202ENST00000395081 1427 ntAPPRIS P1 TSL 1 (best) BASIC28.98■■■□□ 2.23
DDX60Q8IY21 PEA15-201ENST00000360472 2471 ntAPPRIS P1 TSL 1 (best) BASIC28.98■■■□□ 2.23
DDX60Q8IY21 LINC01632-201ENST00000615763 496 ntTSL 3 BASIC28.97■■■□□ 2.23
DDX60Q8IY21 FLJ37453-201ENST00000317122 2473 ntTSL 2 BASIC28.97■■■□□ 2.23
DDX60Q8IY21 CREB3L3-205ENST00000602257 1475 ntAPPRIS ALT2 TSL 1 (best) BASIC28.97■■■□□ 2.23
DDX60Q8IY21 SMARCA5-AS1-201ENST00000500800 945 ntTSL 1 (best) BASIC28.97■■■□□ 2.23
DDX60Q8IY21 ZDHHC20-203ENST00000400590 1869 ntAPPRIS ALT2 TSL 5 BASIC28.97■■■□□ 2.23
DDX60Q8IY21 PGR-AS1-202ENST00000632820 1545 ntTSL 1 (best) BASIC28.96■■■□□ 2.23
DDX60Q8IY21 PPP1R14A-204ENST00000591291 433 ntTSL 5 BASIC28.96■■■□□ 2.23
DDX60Q8IY21 RPUSD1-207ENST00000565809 1918 ntTSL 2 BASIC28.96■■■□□ 2.23
DDX60Q8IY21 KRT72-202ENST00000354310 1764 ntTSL 2 BASIC28.96■■■□□ 2.23
DDX60Q8IY21 EEF1D-201ENST00000317198 1458 ntAPPRIS ALT2 TSL 5 BASIC28.96■■■□□ 2.23
DDX60Q8IY21 GFRA4-201ENST00000290417 1427 ntAPPRIS ALT2 TSL 1 (best) BASIC28.95■■■□□ 2.23
DDX60Q8IY21 PTH1R-206ENST00000430002 1947 ntAPPRIS P1 TSL 1 (best) BASIC28.95■■■□□ 2.23
DDX60Q8IY21 ZNF641-205ENST00000547026 1823 ntAPPRIS P1 TSL 1 (best) BASIC28.95■■■□□ 2.22
DDX60Q8IY21 C14orf80-204ENST00000392522 1630 ntAPPRIS P4 TSL 5 BASIC28.94■■■□□ 2.22
DDX60Q8IY21 C1QTNF12-201ENST00000330388 1036 ntAPPRIS P1 TSL 1 (best) BASIC28.94■■■□□ 2.22
DDX60Q8IY21 SUDS3P1-201ENST00000505831 966 ntBASIC28.94■■■□□ 2.22
DDX60Q8IY21 NRL-205ENST00000560550 788 ntTSL 1 (best) BASIC28.94■■■□□ 2.22
DDX60Q8IY21 TAZ-216ENST00000613002 1485 ntTSL 1 (best) BASIC28.94■■■□□ 2.22
DDX60Q8IY21 PKMYT1-211ENST00000573944 1891 ntAPPRIS P1 TSL 5 BASIC28.94■■■□□ 2.22
DDX60Q8IY21 SNHG7-204ENST00000447221 2157 ntTSL 2 BASIC28.94■■■□□ 2.22
DDX60Q8IY21 CD63-202ENST00000420846 981 ntAPPRIS P1 TSL 5 BASIC28.94■■■□□ 2.22
DDX60Q8IY21 AL031432.3-201ENST00000607698 485 ntBASIC28.94■■■□□ 2.22
DDX60Q8IY21 AC106739.1-201ENST00000617035 715 ntBASIC28.94■■■□□ 2.22
DDX60Q8IY21 PEX7-201ENST00000318471 1464 ntAPPRIS P1 TSL 1 (best) BASIC28.94■■■□□ 2.22
DDX60Q8IY21 CCDC106-202ENST00000586790 2162 ntAPPRIS P1 TSL 1 (best) BASIC28.93■■■□□ 2.22
DDX60Q8IY21 TANGO2-204ENST00000401833 1920 ntTSL 5 BASIC28.93■■■□□ 2.22
DDX60Q8IY21 OXSR1-203ENST00000446845 1908 ntTSL 5 BASIC28.92■■■□□ 2.22
DDX60Q8IY21 LIN7B-202ENST00000391864 582 ntTSL 3 BASIC28.92■■■□□ 2.22
DDX60Q8IY21 DUSP22-214ENST00000605315 867 ntTSL 5 BASIC28.92■■■□□ 2.22
DDX60Q8IY21 NEDD4L-237ENST00000617539 728 ntTSL 2 BASIC28.92■■■□□ 2.22
DDX60Q8IY21 ABL2-203ENST00000392043 2140 ntTSL 1 (best) BASIC28.92■■■□□ 2.22
DDX60Q8IY21 SLC6A10P-202ENST00000431994 2058 ntBASIC28.91■■■□□ 2.22
DDX60Q8IY21 ST3GAL5-214ENST00000638178 2034 ntTSL 5 BASIC28.91■■■□□ 2.22
DDX60Q8IY21 AC112229.4-201ENST00000488671 1528 ntTSL 2 BASIC28.91■■■□□ 2.22
DDX60Q8IY21 RRP9-201ENST00000232888 1578 ntAPPRIS P1 TSL 1 (best) BASIC28.91■■■□□ 2.22
DDX60Q8IY21 ARHGAP29-202ENST00000370217 2043 ntTSL 1 (best) BASIC28.9■■■□□ 2.22
DDX60Q8IY21 SLC16A11-202ENST00000447225 1779 ntAPPRIS ALT2 TSL 5 BASIC28.9■■■□□ 2.22
DDX60Q8IY21 RARA-AS1-201ENST00000581080 1790 ntTSL 1 (best) BASIC28.9■■■□□ 2.22
DDX60Q8IY21 RRAS2-201ENST00000256196 1516 ntAPPRIS P1 TSL 1 (best) BASIC28.9■■■□□ 2.22
DDX60Q8IY21 TNFRSF6B-201ENST00000369996 1124 ntAPPRIS P1 TSL 1 (best) BASIC28.9■■■□□ 2.22
Retrieved 100 of 98,524 protein–RNA pairs in 14.1 ms