Protein–RNA interactions for Protein: Q8IWN7

RP1L1, Retinitis pigmentosa 1-like 1 protein, humanhuman

Predicted RBP Predictions only

Length 2,480 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RP1L1Q8IWN7 TNFRSF6B-201ENST00000369996 1124 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
RP1L1Q8IWN7 GRAMD1B-217ENST00000640939 1212 ntTSL 5 BASIC21.04■□□□□ 0.96
RP1L1Q8IWN7 PACS2-201ENST00000325438 3708 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
RP1L1Q8IWN7 PPM1N-207ENST00000451287 1293 ntAPPRIS P1 TSL 5 BASIC21.03■□□□□ 0.96
RP1L1Q8IWN7 AC243829.1-202ENST00000618848 486 ntTSL 3 BASIC21.03■□□□□ 0.96
RP1L1Q8IWN7 DAZAP1-202ENST00000336761 2290 ntTSL 5 BASIC21.03■□□□□ 0.96
RP1L1Q8IWN7 EVA1C-203ENST00000401402 1558 ntTSL 5 BASIC21.03■□□□□ 0.96
RP1L1Q8IWN7 STX10-202ENST00000343587 1128 ntTSL 1 (best) BASIC21.02■□□□□ 0.96
RP1L1Q8IWN7 BAG1-212ENST00000641048 1038 ntAPPRIS P3 BASIC21.02■□□□□ 0.96
RP1L1Q8IWN7 PPIL6-203ENST00000440797 1693 ntTSL 1 (best) BASIC21.02■□□□□ 0.96
RP1L1Q8IWN7 KCNJ4-201ENST00000303592 2065 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
RP1L1Q8IWN7 DACT2-202ENST00000366796 2028 ntAPPRIS ALT2 TSL 1 (best) BASIC21.02■□□□□ 0.96
RP1L1Q8IWN7 TMEM61-201ENST00000371268 1097 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
RP1L1Q8IWN7 KLC3-201ENST00000391946 1780 ntAPPRIS P2 TSL 1 (best) BASIC21.02■□□□□ 0.96
RP1L1Q8IWN7 TANGO2-214ENST00000447208 2086 ntTSL 3 BASIC21.02■□□□□ 0.96
RP1L1Q8IWN7 LYPLA1-215ENST00000618914 2482 ntTSL 5 BASIC21.02■□□□□ 0.95
RP1L1Q8IWN7 MAPK13-201ENST00000211287 2052 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.95
RP1L1Q8IWN7 PAOX-203ENST00000357296 1633 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
RP1L1Q8IWN7 FSD1-204ENST00000597590 1634 ntTSL 5 BASIC21.01■□□□□ 0.95
RP1L1Q8IWN7 RCE1-202ENST00000524506 1379 ntTSL 5 BASIC21.01■□□□□ 0.95
RP1L1Q8IWN7 AC005703.6-201ENST00000623265 1329 ntBASIC21.01■□□□□ 0.95
RP1L1Q8IWN7 TSPAN2-201ENST00000369515 793 ntTSL 3 BASIC21.01■□□□□ 0.95
RP1L1Q8IWN7 SRD5A1P1-201ENST00000442297 786 ntBASIC21.01■□□□□ 0.95
RP1L1Q8IWN7 EPHA10-211ENST00000540011 720 ntTSL 5 BASIC21.01■□□□□ 0.95
RP1L1Q8IWN7 PTGDR-202ENST00000553372 1216 ntTSL 3 BASIC21.01■□□□□ 0.95
RP1L1Q8IWN7 SIRT3-204ENST00000525319 1475 ntAPPRIS ALT2 TSL 2 BASIC21.01■□□□□ 0.95
RP1L1Q8IWN7 CLK2-203ENST00000368361 2166 ntAPPRIS ALT1 TSL 1 (best) BASIC21.01■□□□□ 0.95
RP1L1Q8IWN7 EFEMP2-201ENST00000307998 2034 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
RP1L1Q8IWN7 SDSL-201ENST00000345635 1397 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
RP1L1Q8IWN7 BHLHA9-201ENST00000391429 902 ntAPPRIS P1 BASIC21■□□□□ 0.95
RP1L1Q8IWN7 SDHAP1-204ENST00000427415 559 ntTSL 4 BASIC21■□□□□ 0.95
RP1L1Q8IWN7 WDR86-AS1-204ENST00000489632 751 ntTSL 3 BASIC21■□□□□ 0.95
RP1L1Q8IWN7 RHOF-204ENST00000537265 699 ntTSL 2 BASIC21■□□□□ 0.95
RP1L1Q8IWN7 TGFBR3L-202ENST00000565886 1260 ntAPPRIS P1 TSL 5 BASIC21■□□□□ 0.95
RP1L1Q8IWN7 RHEB-201ENST00000262187 2075 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
RP1L1Q8IWN7 PLEKHF1-201ENST00000436066 2084 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
RP1L1Q8IWN7 PIK3R2-207ENST00000617130 2187 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
RP1L1Q8IWN7 NKX2-8-201ENST00000258829 1261 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
RP1L1Q8IWN7 C1QTNF12-201ENST00000330388 1036 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
RP1L1Q8IWN7 FAIM-202ENST00000360570 1157 ntAPPRIS ALT1 TSL 3 BASIC21■□□□□ 0.95
RP1L1Q8IWN7 DUX4L19-201ENST00000557448 1267 ntBASIC21■□□□□ 0.95
RP1L1Q8IWN7 RTN2-202ENST00000344680 2063 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
RP1L1Q8IWN7 NAA38-201ENST00000333775 999 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
RP1L1Q8IWN7 ZNF264-206ENST00000600531 774 ntTSL 2 BASIC20.99■□□□□ 0.95
RP1L1Q8IWN7 PLSCR3-209ENST00000574401 2032 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
RP1L1Q8IWN7 USP2-204ENST00000525735 1704 ntAPPRIS ALT1 TSL 1 (best) BASIC20.99■□□□□ 0.95
RP1L1Q8IWN7 NRIP3-203ENST00000531090 980 ntTSL 2 BASIC20.99■□□□□ 0.95
RP1L1Q8IWN7 NKPD1-202ENST00000589776 1950 ntAPPRIS P1 BASIC20.98■□□□□ 0.95
RP1L1Q8IWN7 ARPC5L-201ENST00000259477 1325 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
RP1L1Q8IWN7 IMPA2-212ENST00000625802 500 ntTSL 2 BASIC20.98■□□□□ 0.95
RP1L1Q8IWN7 MFSD7-202ENST00000347950 1599 ntTSL 2 BASIC20.98■□□□□ 0.95
RP1L1Q8IWN7 HDGFL1-201ENST00000510882 2174 ntAPPRIS P1 BASIC20.98■□□□□ 0.95
RP1L1Q8IWN7 NRM-201ENST00000259953 1755 ntAPPRIS P2 TSL 2 BASIC20.98■□□□□ 0.95
RP1L1Q8IWN7 CRLF1-201ENST00000392386 1792 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
RP1L1Q8IWN7 AQP1-202ENST00000409611 1140 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
RP1L1Q8IWN7 CAMTA1-208ENST00000473578 567 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
RP1L1Q8IWN7 SERGEF-219ENST00000532265 1124 ntTSL 2 BASIC20.98■□□□□ 0.95
RP1L1Q8IWN7 NKX2-2-AS1-201ENST00000549659 638 ntTSL 5 BASIC20.98■□□□□ 0.95
RP1L1Q8IWN7 MPP5-205ENST00000556345 1163 ntTSL 2 BASIC20.98■□□□□ 0.95
RP1L1Q8IWN7 DHFR-203ENST00000505337 1719 ntAPPRIS P1 TSL 2 BASIC20.97■□□□□ 0.95
RP1L1Q8IWN7 SCO2-204ENST00000543927 1051 ntAPPRIS P1 TSL 2 BASIC20.97■□□□□ 0.95
RP1L1Q8IWN7 TSPOAP1-AS1-203ENST00000579527 2042 ntTSL 2 BASIC20.97■□□□□ 0.95
RP1L1Q8IWN7 UBL7-202ENST00000395081 1427 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
RP1L1Q8IWN7 TSPAN4-203ENST00000397397 1423 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
RP1L1Q8IWN7 CHAC1-201ENST00000444189 1204 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
RP1L1Q8IWN7 GATA2-AS1-201ENST00000464242 1163 ntTSL 2 BASIC20.97■□□□□ 0.95
RP1L1Q8IWN7 AC112229.4-201ENST00000488671 1528 ntTSL 2 BASIC20.97■□□□□ 0.95
RP1L1Q8IWN7 TMEM260-202ENST00000538838 1638 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
RP1L1Q8IWN7 HACD1-201ENST00000326961 773 ntTSL 2 BASIC20.96■□□□□ 0.95
RP1L1Q8IWN7 DPP10-AS1-201ENST00000432658 730 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
RP1L1Q8IWN7 OAS3-205ENST00000548514 1392 ntTSL 2 BASIC20.96■□□□□ 0.95
RP1L1Q8IWN7 REST-206ENST00000612429 1376 ntTSL 5 BASIC20.96■□□□□ 0.95
RP1L1Q8IWN7 REST-207ENST00000616975 1370 ntTSL 5 BASIC20.96■□□□□ 0.95
RP1L1Q8IWN7 REST-212ENST00000640343 1352 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
RP1L1Q8IWN7 FAM174B-207ENST00000555748 866 ntAPPRIS ALT2 TSL 3 BASIC20.96■□□□□ 0.95
RP1L1Q8IWN7 STX18-205ENST00000505286 1380 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
RP1L1Q8IWN7 CCR10-201ENST00000332438 1773 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
RP1L1Q8IWN7 CDC16-211ENST00000628084 2058 ntTSL 5 BASIC20.95■□□□□ 0.94
RP1L1Q8IWN7 C1QTNF1-206ENST00000579760 1672 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
RP1L1Q8IWN7 ZDHHC16-205ENST00000370846 1280 ntTSL 3 BASIC20.95■□□□□ 0.94
RP1L1Q8IWN7 ORAI3-202ENST00000562699 628 ntTSL 2 BASIC20.95■□□□□ 0.94
RP1L1Q8IWN7 SSSCA1-AS1-201ENST00000567594 614 ntBASIC20.95■□□□□ 0.94
RP1L1Q8IWN7 MIR6722-201ENST00000617286 78 ntBASIC20.95■□□□□ 0.94
RP1L1Q8IWN7 CYC1-201ENST00000318911 1240 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
RP1L1Q8IWN7 GFRA4-201ENST00000290417 1427 ntAPPRIS ALT2 TSL 1 (best) BASIC20.94■□□□□ 0.94
RP1L1Q8IWN7 SLIT1-203ENST00000371041 1695 ntTSL 2 BASIC20.94■□□□□ 0.94
RP1L1Q8IWN7 ZNF821-201ENST00000313565 1874 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
RP1L1Q8IWN7 IRS3P-201ENST00000223076 1006 ntBASIC20.94■□□□□ 0.94
RP1L1Q8IWN7 AC008105.3-201ENST00000586376 844 ntTSL 3 BASIC20.94■□□□□ 0.94
RP1L1Q8IWN7 ST3GAL5-231ENST00000639119 2131 ntTSL 5 BASIC20.94■□□□□ 0.94
RP1L1Q8IWN7 TNFSF12-TNFSF13-201ENST00000293826 1816 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
RP1L1Q8IWN7 P2RX4-203ENST00000359949 1836 ntTSL 5 BASIC20.94■□□□□ 0.94
RP1L1Q8IWN7 ZNF784-202ENST00000591479 1559 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
RP1L1Q8IWN7 EVA1C-201ENST00000300255 1998 ntAPPRIS P3 TSL 1 (best) BASIC20.94■□□□□ 0.94
RP1L1Q8IWN7 FOXO3B-201ENST00000395675 1928 ntBASIC20.94■□□□□ 0.94
RP1L1Q8IWN7 NME4-201ENST00000219479 995 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
RP1L1Q8IWN7 STMN4-201ENST00000265770 1250 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
RP1L1Q8IWN7 SERBP1P1-201ENST00000396021 1160 ntBASIC20.94■□□□□ 0.94
RP1L1Q8IWN7 RPUSD3-206ENST00000433535 1178 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
RP1L1Q8IWN7 ANO1-202ENST00000355303 4790 ntAPPRIS P2 TSL 1 (best) BASIC20.94■□□□□ 0.94
Retrieved 100 of 98,524 protein–RNA pairs in 55.9 ms