Protein–RNA interactions for Protein: Q8IUD6

RNF135, E3 ubiquitin-protein ligase RNF135, humanhuman

Predictions only

Length 432 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF135Q8IUD6 VRK2-202ENST00000412104 1916 ntTSL 1 (best) BASIC24.64■■□□□ 1.53
RNF135Q8IUD6 BCL7C-202ENST00000380317 2409 ntTSL 1 (best) BASIC24.64■■□□□ 1.53
RNF135Q8IUD6 SLC30A5-201ENST00000380860 1317 ntTSL 1 (best) BASIC24.63■■□□□ 1.53
RNF135Q8IUD6 ZCCHC2-201ENST00000269499 5959 ntAPPRIS P2 TSL 5 BASIC24.63■■□□□ 1.53
RNF135Q8IUD6 PLEK2-201ENST00000216446 1549 ntAPPRIS P1 TSL 1 (best) BASIC24.63■■□□□ 1.53
RNF135Q8IUD6 C1QL1-201ENST00000253407 1295 ntAPPRIS P1 TSL 1 (best) BASIC24.63■■□□□ 1.53
RNF135Q8IUD6 AC011551.1-201ENST00000614101 683 ntBASIC24.63■■□□□ 1.53
RNF135Q8IUD6 HMX2-201ENST00000339992 1628 ntAPPRIS P1 TSL 1 (best) BASIC24.63■■□□□ 1.53
RNF135Q8IUD6 PRSS22-201ENST00000161006 1386 ntAPPRIS P1 TSL 1 (best) BASIC24.63■■□□□ 1.53
RNF135Q8IUD6 CA9-204ENST00000617161 1374 ntTSL 1 (best) BASIC24.63■■□□□ 1.53
RNF135Q8IUD6 SYT8-201ENST00000341958 1556 ntAPPRIS ALT2 TSL 5 BASIC24.63■■□□□ 1.53
RNF135Q8IUD6 CCDC107-205ENST00000421582 1324 ntAPPRIS ALT2 TSL 2 BASIC24.62■■□□□ 1.53
RNF135Q8IUD6 GTF2E2-201ENST00000355904 1762 ntAPPRIS P1 TSL 1 (best) BASIC24.62■■□□□ 1.53
RNF135Q8IUD6 SHF-207ENST00000560540 2062 ntTSL 5 BASIC24.62■■□□□ 1.53
RNF135Q8IUD6 AC024257.2-201ENST00000549699 147 ntBASIC24.62■■□□□ 1.53
RNF135Q8IUD6 LYPD2-201ENST00000359228 594 ntAPPRIS P1 TSL 1 (best) BASIC24.61■■□□□ 1.53
RNF135Q8IUD6 TMEM185A-207ENST00000600449 2840 ntAPPRIS P1 TSL 1 (best) BASIC24.61■■□□□ 1.53
RNF135Q8IUD6 PPP1R3F-205ENST00000495799 1537 ntTSL 1 (best) BASIC24.61■■□□□ 1.53
RNF135Q8IUD6 GPS1-204ENST00000392358 2276 ntTSL 1 (best) BASIC24.6■■□□□ 1.53
RNF135Q8IUD6 ATP5C1-202ENST00000356708 1163 ntAPPRIS ALT1 TSL 1 (best) BASIC24.6■■□□□ 1.53
RNF135Q8IUD6 AC097381.1-201ENST00000429019 1296 ntBASIC24.6■■□□□ 1.53
RNF135Q8IUD6 EDA-209ENST00000525810 843 ntTSL 1 (best) BASIC24.6■■□□□ 1.53
RNF135Q8IUD6 PICSAR-201ENST00000615826 733 ntTSL 1 (best) BASIC24.6■■□□□ 1.53
RNF135Q8IUD6 SHISA9-205ENST00000639941 1135 ntAPPRIS ALT2 TSL 5 BASIC24.6■■□□□ 1.53
RNF135Q8IUD6 GATA4-209ENST00000622443 1982 ntTSL 5 BASIC24.6■■□□□ 1.53
RNF135Q8IUD6 TMEM266-201ENST00000388942 2520 ntAPPRIS P1 TSL 5 BASIC24.6■■□□□ 1.53
RNF135Q8IUD6 UBALD2-201ENST00000327490 1593 ntAPPRIS P1 TSL 1 (best) BASIC24.59■■□□□ 1.53
RNF135Q8IUD6 CRYAA-201ENST00000291554 1139 ntAPPRIS P1 TSL 1 (best) BASIC24.59■■□□□ 1.53
RNF135Q8IUD6 AL162430.1-201ENST00000480705 870 ntBASIC24.59■■□□□ 1.53
RNF135Q8IUD6 AC092343.1-201ENST00000500224 729 ntTSL 3 BASIC24.59■■□□□ 1.53
RNF135Q8IUD6 AL136967.2-201ENST00000623968 743 ntBASIC24.59■■□□□ 1.53
RNF135Q8IUD6 CDK2AP1-201ENST00000261692 1625 ntAPPRIS P1 TSL 1 (best) BASIC24.59■■□□□ 1.53
RNF135Q8IUD6 FSD1-201ENST00000221856 1831 ntAPPRIS P1 TSL 1 (best) BASIC24.58■■□□□ 1.53
RNF135Q8IUD6 TSPAN10-203ENST00000574882 1837 ntAPPRIS P2 TSL 1 (best) BASIC24.58■■□□□ 1.53
RNF135Q8IUD6 CTU1-201ENST00000421832 2087 ntAPPRIS P1 TSL 2 BASIC24.58■■□□□ 1.53
RNF135Q8IUD6 CASP9-202ENST00000348549 1621 ntTSL 1 (best) BASIC24.58■■□□□ 1.53
RNF135Q8IUD6 STOML2-201ENST00000356493 1278 ntAPPRIS P1 TSL 1 (best) BASIC24.58■■□□□ 1.53
RNF135Q8IUD6 MCRIP1-202ENST00000457257 942 ntTSL 3 BASIC24.58■■□□□ 1.53
RNF135Q8IUD6 SDSL-202ENST00000403593 1449 ntAPPRIS P1 TSL 1 (best) BASIC24.58■■□□□ 1.53
RNF135Q8IUD6 NXPH4-201ENST00000349394 1804 ntAPPRIS P1 TSL 1 (best) BASIC24.58■■□□□ 1.53
RNF135Q8IUD6 MADCAM1-202ENST00000346144 1309 ntAPPRIS ALT2 TSL 1 (best) BASIC24.58■■□□□ 1.52
RNF135Q8IUD6 RCE1-202ENST00000524506 1379 ntTSL 5 BASIC24.57■■□□□ 1.52
RNF135Q8IUD6 NAA38-201ENST00000333775 999 ntTSL 1 (best) BASIC24.57■■□□□ 1.52
RNF135Q8IUD6 FGD5-AS1-204ENST00000430166 1184 ntTSL 2 BASIC24.57■■□□□ 1.52
RNF135Q8IUD6 FAM174B-207ENST00000555748 866 ntAPPRIS ALT2 TSL 3 BASIC24.57■■□□□ 1.52
RNF135Q8IUD6 SLC12A5-217ENST00000626937 1224 ntTSL 1 (best) BASIC24.57■■□□□ 1.52
RNF135Q8IUD6 DEDD-212ENST00000545495 2329 ntAPPRIS P1 TSL 3 BASIC24.57■■□□□ 1.52
RNF135Q8IUD6 TOP1MT-208ENST00000519148 1868 ntTSL 2 BASIC24.56■■□□□ 1.52
RNF135Q8IUD6 NKX2-8-201ENST00000258829 1261 ntAPPRIS P1 TSL 1 (best) BASIC24.56■■□□□ 1.52
RNF135Q8IUD6 RBM38-205ENST00000440234 686 ntTSL 2 BASIC24.56■■□□□ 1.52
RNF135Q8IUD6 AC087623.3-201ENST00000607047 1098 ntBASIC24.56■■□□□ 1.52
RNF135Q8IUD6 KRTAP5-4-202ENST00000616115 660 ntAPPRIS ALT2 TSL 5 BASIC24.56■■□□□ 1.52
RNF135Q8IUD6 ZNF692-201ENST00000306601 1931 ntAPPRIS P3 TSL 1 (best) BASIC24.56■■□□□ 1.52
RNF135Q8IUD6 TSEN34-204ENST00000429671 1912 ntTSL 2 BASIC24.56■■□□□ 1.52
RNF135Q8IUD6 OXSR1-203ENST00000446845 1908 ntTSL 5 BASIC24.56■■□□□ 1.52
RNF135Q8IUD6 DGAT1-201ENST00000332324 1473 ntTSL 5 BASIC24.56■■□□□ 1.52
RNF135Q8IUD6 CCDC166-201ENST00000542437 1320 ntAPPRIS P1 TSL 2 BASIC24.56■■□□□ 1.52
RNF135Q8IUD6 SDSL-201ENST00000345635 1397 ntAPPRIS P1 TSL 1 (best) BASIC24.55■■□□□ 1.52
RNF135Q8IUD6 AQP1-202ENST00000409611 1140 ntTSL 1 (best) BASIC24.55■■□□□ 1.52
RNF135Q8IUD6 SMIM29-205ENST00000468145 903 ntTSL 2 BASIC24.55■■□□□ 1.52
RNF135Q8IUD6 SMIM29-207ENST00000481533 1053 ntAPPRIS P1 TSL 1 (best) BASIC24.55■■□□□ 1.52
RNF135Q8IUD6 VAX1-202ENST00000369206 1723 ntAPPRIS P1 TSL 5 BASIC24.55■■□□□ 1.52
RNF135Q8IUD6 CLPTM1L-201ENST00000320895 2500 ntAPPRIS P1 TSL 1 (best) BASIC24.55■■□□□ 1.52
RNF135Q8IUD6 C2CD4D-201ENST00000454109 1757 ntAPPRIS P1 TSL 2 BASIC24.54■■□□□ 1.52
RNF135Q8IUD6 PORCN-202ENST00000355961 1848 ntAPPRIS ALT1 TSL 1 (best) BASIC24.54■■□□□ 1.52
RNF135Q8IUD6 CRACR2B-201ENST00000450448 1663 ntTSL 1 (best) BASIC24.54■■□□□ 1.52
RNF135Q8IUD6 EPM2A-208ENST00000618445 1694 ntTSL 1 (best) BASIC24.54■■□□□ 1.52
RNF135Q8IUD6 PEX7-201ENST00000318471 1464 ntAPPRIS P1 TSL 1 (best) BASIC24.54■■□□□ 1.52
RNF135Q8IUD6 SIRT3-204ENST00000525319 1475 ntAPPRIS ALT2 TSL 2 BASIC24.54■■□□□ 1.52
RNF135Q8IUD6 AF213884.3-201ENST00000563833 479 ntBASIC24.54■■□□□ 1.52
RNF135Q8IUD6 DHRS11-215ENST00000618403 1598 ntAPPRIS P1 TSL 1 (best) BASIC24.54■■□□□ 1.52
RNF135Q8IUD6 PRKAR1B-203ENST00000403562 1917 ntAPPRIS P1 TSL 1 (best) BASIC24.53■■□□□ 1.52
RNF135Q8IUD6 C19orf60-201ENST00000358607 839 ntAPPRIS P3 TSL 1 (best) BASIC24.53■■□□□ 1.52
RNF135Q8IUD6 CCDC160-201ENST00000370809 1299 ntAPPRIS P1 TSL 5 BASIC24.53■■□□□ 1.52
RNF135Q8IUD6 C19orf60-202ENST00000450195 702 ntAPPRIS ALT2 TSL 1 (best) BASIC24.53■■□□□ 1.52
RNF135Q8IUD6 GRAMD4P4-201ENST00000613563 1115 ntBASIC24.53■■□□□ 1.52
RNF135Q8IUD6 FEZ2-204ENST00000405912 1931 ntTSL 1 (best) BASIC24.53■■□□□ 1.52
RNF135Q8IUD6 SLC39A3-201ENST00000269740 1502 ntAPPRIS P1 TSL 1 (best) BASIC24.52■■□□□ 1.52
RNF135Q8IUD6 ZNF821-201ENST00000313565 1874 ntTSL 1 (best) BASIC24.52■■□□□ 1.52
RNF135Q8IUD6 GATA3-AS1-204ENST00000438755 675 ntTSL 1 (best) BASIC24.52■■□□□ 1.52
RNF135Q8IUD6 SRD5A1P1-201ENST00000442297 786 ntBASIC24.52■■□□□ 1.52
RNF135Q8IUD6 AC092807.3-205ENST00000467666 531 ntTSL 3 BASIC24.52■■□□□ 1.52
RNF135Q8IUD6 AC019163.1-201ENST00000512634 610 ntTSL 2 BASIC24.52■■□□□ 1.52
RNF135Q8IUD6 EPHA10-211ENST00000540011 720 ntTSL 5 BASIC24.52■■□□□ 1.52
RNF135Q8IUD6 PLD4-205ENST00000553861 667 ntTSL 2 BASIC24.52■■□□□ 1.52
RNF135Q8IUD6 EVA1C-201ENST00000300255 1998 ntAPPRIS P3 TSL 1 (best) BASIC24.52■■□□□ 1.52
RNF135Q8IUD6 TLE6-201ENST00000246112 2100 ntAPPRIS ALT2 TSL 1 (best) BASIC24.52■■□□□ 1.52
RNF135Q8IUD6 CFAP99-207ENST00000635017 2298 ntTSL 5 BASIC24.51■■□□□ 1.51
RNF135Q8IUD6 BCKDHB-202ENST00000356489 1514 ntAPPRIS P1 TSL 1 (best) BASIC24.51■■□□□ 1.51
RNF135Q8IUD6 ERN1-208ENST00000606895 2068 ntBASIC24.51■■□□□ 1.51
RNF135Q8IUD6 PPM1N-207ENST00000451287 1293 ntAPPRIS P1 TSL 5 BASIC24.51■■□□□ 1.51
RNF135Q8IUD6 STOX2-205ENST00000513034 807 ntTSL 3 BASIC24.51■■□□□ 1.51
RNF135Q8IUD6 AIPL1-206ENST00000571740 1202 ntAPPRIS ALT2 TSL 1 (best) BASIC24.51■■□□□ 1.51
RNF135Q8IUD6 AC119427.1-201ENST00000633182 556 ntTSL 4 BASIC24.51■■□□□ 1.51
RNF135Q8IUD6 FGF22-201ENST00000215530 1311 ntAPPRIS P1 TSL 1 (best) BASIC24.51■■□□□ 1.51
RNF135Q8IUD6 SHISA5-201ENST00000296444 2369 ntTSL 1 (best) BASIC24.51■■□□□ 1.51
RNF135Q8IUD6 AF131216.4-201ENST00000638924 1588 ntBASIC24.5■■□□□ 1.51
RNF135Q8IUD6 ACSS1-203ENST00000432802 2438 ntTSL 2 BASIC24.5■■□□□ 1.51
RNF135Q8IUD6 SERF1A-202ENST00000354833 1889 ntTSL 1 (best) BASIC24.5■■□□□ 1.51
RNF135Q8IUD6 SERF1B-201ENST00000380750 1889 ntTSL 1 (best) BASIC24.5■■□□□ 1.51
Retrieved 100 of 98,524 protein–RNA pairs in 26.6 ms