Protein–RNA interactions for Protein: Q86UE3

ZNF546, Zinc finger protein 546, humanhuman

Predictions only

Length 836 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF546Q86UE3 CIB2-204ENST00000557846 934 ntTSL 3 BASIC19.24■□□□□ 0.67
ZNF546Q86UE3 MIR3665-201ENST00000578708 105 ntBASIC19.24■□□□□ 0.67
ZNF546Q86UE3 RAD21L1-202ENST00000402452 1707 ntTSL 5 BASIC19.24■□□□□ 0.67
ZNF546Q86UE3 KAT2B-201ENST00000263754 4833 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
ZNF546Q86UE3 LINC00526-201ENST00000581067 1875 ntBASIC19.24■□□□□ 0.67
ZNF546Q86UE3 IRX4-201ENST00000231357 2221 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
ZNF546Q86UE3 AC127496.7-201ENST00000625110 1798 ntBASIC19.24■□□□□ 0.67
ZNF546Q86UE3 LRP5-201ENST00000294304 5159 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
ZNF546Q86UE3 LRFN4-202ENST00000393952 1550 ntTSL 5 BASIC19.23■□□□□ 0.67
ZNF546Q86UE3 ANO8-204ENST00000630631 1905 ntTSL 5 BASIC19.23■□□□□ 0.67
ZNF546Q86UE3 GALNT8-202ENST00000433855 5977 ntTSL 2 BASIC19.23■□□□□ 0.67
ZNF546Q86UE3 MFSD7-201ENST00000322224 2123 ntAPPRIS P3 TSL 1 (best) BASIC19.23■□□□□ 0.67
ZNF546Q86UE3 ARTN-204ENST00000438616 889 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
ZNF546Q86UE3 MAP3K3-201ENST00000361357 4818 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
ZNF546Q86UE3 PPP2R3B-202ENST00000390665 2151 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
ZNF546Q86UE3 GPIHBP1-201ENST00000622500 2282 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
ZNF546Q86UE3 ATPAF1-213ENST00000574428 1760 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
ZNF546Q86UE3 DENND1B-204ENST00000367396 2177 ntAPPRIS P3 TSL 1 (best) BASIC19.22■□□□□ 0.67
ZNF546Q86UE3 PGR-AS1-202ENST00000632820 1545 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
ZNF546Q86UE3 MSANTD2-203ENST00000524950 1109 ntTSL 2 BASIC19.22■□□□□ 0.67
ZNF546Q86UE3 ARHGEF7-202ENST00000317133 4361 ntAPPRIS ALT2 TSL 1 (best) BASIC19.22■□□□□ 0.67
ZNF546Q86UE3 PFKFB3-201ENST00000317350 1999 ntAPPRIS ALT1 TSL 5 BASIC19.22■□□□□ 0.67
ZNF546Q86UE3 DOK1-203ENST00000409429 1955 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
ZNF546Q86UE3 ATP9A-202ENST00000338821 8106 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
ZNF546Q86UE3 FAM78B-201ENST00000338353 1597 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
ZNF546Q86UE3 SYT7-201ENST00000263846 4854 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
ZNF546Q86UE3 CEND1-201ENST00000330106 1649 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
ZNF546Q86UE3 HMGA2-206ENST00000536545 1788 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
ZNF546Q86UE3 MID1IP1-203ENST00000457894 1902 ntAPPRIS P1 TSL 3 BASIC19.21■□□□□ 0.67
ZNF546Q86UE3 UPF3A-202ENST00000375299 2387 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
ZNF546Q86UE3 C12orf75-201ENST00000443585 1366 ntAPPRIS P1 TSL 2 BASIC19.21■□□□□ 0.67
ZNF546Q86UE3 MRGPRF-203ENST00000441623 2282 ntAPPRIS P1 TSL 2 BASIC19.21■□□□□ 0.67
ZNF546Q86UE3 AL133346.1-201ENST00000435287 495 ntTSL 2 BASIC19.21■□□□□ 0.67
ZNF546Q86UE3 HOPX-206ENST00000503639 1248 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
ZNF546Q86UE3 BCL2L12-212ENST00000616144 1854 ntAPPRIS P3 TSL 1 (best) BASIC19.21■□□□□ 0.67
ZNF546Q86UE3 DHH-201ENST00000266991 1936 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
ZNF546Q86UE3 BDH1-207ENST00000441275 1605 ntTSL 5 BASIC19.21■□□□□ 0.67
ZNF546Q86UE3 NIPA2-203ENST00000398013 2280 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
ZNF546Q86UE3 C7orf25-206ENST00000447342 1823 ntTSL 2 BASIC19.21■□□□□ 0.67
ZNF546Q86UE3 LGALS9B-202ENST00000423676 1713 ntAPPRIS ALT2 TSL 1 (best) BASIC19.2■□□□□ 0.66
ZNF546Q86UE3 ZNF444-211ENST00000592949 1906 ntAPPRIS ALT2 TSL 1 (best) BASIC19.2■□□□□ 0.66
ZNF546Q86UE3 PPT2-248ENST00000395523 2111 ntAPPRIS ALT2 TSL 5 BASIC19.2■□□□□ 0.66
ZNF546Q86UE3 HAS1-202ENST00000540069 2110 ntAPPRIS ALT2 TSL 1 (best) BASIC19.2■□□□□ 0.66
ZNF546Q86UE3 NPAS1-208ENST00000602212 2117 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
ZNF546Q86UE3 PDCD2-215ENST00000614056 1287 ntTSL 2 BASIC19.2■□□□□ 0.66
ZNF546Q86UE3 AC007375.3-201ENST00000600936 2314 ntBASIC19.2■□□□□ 0.66
ZNF546Q86UE3 NELFCD-213ENST00000602795 2305 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
ZNF546Q86UE3 LTK-201ENST00000263800 3046 ntAPPRIS P4 TSL 1 (best) BASIC19.2■□□□□ 0.66
ZNF546Q86UE3 WWC2-AS2-201ENST00000578387 2183 ntBASIC19.2■□□□□ 0.66
ZNF546Q86UE3 PAXBP1-201ENST00000290178 2564 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
ZNF546Q86UE3 MLST8-219ENST00000565250 1588 ntAPPRIS P3 TSL 3 BASIC19.19■□□□□ 0.66
ZNF546Q86UE3 VSTM4-201ENST00000298454 2170 ntAPPRIS P3 TSL 2 BASIC19.19■□□□□ 0.66
ZNF546Q86UE3 PCMT1-202ENST00000367380 1628 ntTSL 2 BASIC19.19■□□□□ 0.66
ZNF546Q86UE3 PCMT1-211ENST00000544496 1628 ntTSL 2 BASIC19.19■□□□□ 0.66
ZNF546Q86UE3 KCNIP1-203ENST00000390656 2249 ntTSL 5 BASIC19.19■□□□□ 0.66
ZNF546Q86UE3 CACNB3-205ENST00000547392 2237 ntTSL 5 BASIC19.19■□□□□ 0.66
ZNF546Q86UE3 GNB1-209ENST00000610897 3145 ntAPPRIS P1 TSL 5 BASIC19.18■□□□□ 0.66
ZNF546Q86UE3 LTBP3-201ENST00000301873 4443 ntAPPRIS ALT2 TSL 2 BASIC19.18■□□□□ 0.66
ZNF546Q86UE3 SH2D3A-201ENST00000245908 2296 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
ZNF546Q86UE3 PCSK6-217ENST00000618548 4269 ntAPPRIS ALT2 TSL 1 (best) BASIC19.18■□□□□ 0.66
ZNF546Q86UE3 SCLY-201ENST00000254663 2562 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
ZNF546Q86UE3 DENND4B-201ENST00000361217 5706 ntAPPRIS P2 TSL 1 (best) BASIC19.18■□□□□ 0.66
ZNF546Q86UE3 ZNF205-201ENST00000219091 1947 ntAPPRIS P1 TSL 5 BASIC19.18■□□□□ 0.66
ZNF546Q86UE3 CDKN2A-201ENST00000304494 1218 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
ZNF546Q86UE3 H2AFV-204ENST00000350771 687 ntTSL 2 BASIC19.18■□□□□ 0.66
ZNF546Q86UE3 RANBP10-202ENST00000448631 2232 ntTSL 2 BASIC19.18■□□□□ 0.66
ZNF546Q86UE3 TMEM9B-205ENST00000534025 2083 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
ZNF546Q86UE3 GUSB-201ENST00000304895 2300 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
ZNF546Q86UE3 MAPK9-203ENST00000393360 4326 ntTSL 5 BASIC19.18■□□□□ 0.66
ZNF546Q86UE3 RABEP2-203ENST00000544477 1645 ntTSL 2 BASIC19.18■□□□□ 0.66
ZNF546Q86UE3 CAPNS1-216ENST00000628306 1389 ntTSL 5 BASIC19.18■□□□□ 0.66
ZNF546Q86UE3 SHMT1-202ENST00000352886 2437 ntTSL 2 BASIC19.17■□□□□ 0.66
ZNF546Q86UE3 PLK5-202ENST00000454744 1930 ntAPPRIS P2 TSL 2 BASIC19.17■□□□□ 0.66
ZNF546Q86UE3 POU2F3-206ENST00000543440 1953 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
ZNF546Q86UE3 ARPC2-202ENST00000315717 1505 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
ZNF546Q86UE3 ZDHHC16-201ENST00000345745 1519 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
ZNF546Q86UE3 P4HA2-202ENST00000360568 2313 ntAPPRIS ALT1 TSL 1 (best) BASIC19.17■□□□□ 0.66
ZNF546Q86UE3 CTGF-201ENST00000367976 2339 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
ZNF546Q86UE3 MED17-221ENST00000639724 2317 ntTSL 5 BASIC19.17■□□□□ 0.66
ZNF546Q86UE3 GNAL-201ENST00000269162 1722 ntAPPRIS P1 TSL 2 BASIC19.17■□□□□ 0.66
ZNF546Q86UE3 PDZRN4-202ENST00000402685 3347 ntAPPRIS P1 TSL 2 BASIC19.17■□□□□ 0.66
ZNF546Q86UE3 TBX1-201ENST00000329705 1465 ntAPPRIS ALT2 TSL 1 (best) BASIC19.16■□□□□ 0.66
ZNF546Q86UE3 ZNF74-204ENST00000405993 1839 ntAPPRIS ALT2 TSL 5 BASIC19.16■□□□□ 0.66
ZNF546Q86UE3 VAX2-201ENST00000234392 1147 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
ZNF546Q86UE3 MAD2L2-207ENST00000376692 1118 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
ZNF546Q86UE3 U2AF1L5-201ENST00000610664 897 ntAPPRIS P5 TSL 1 (best) BASIC19.16■□□□□ 0.66
ZNF546Q86UE3 DISC1-223ENST00000628350 2363 ntAPPRIS ALT2 TSL 1 (best) BASIC19.16■□□□□ 0.66
ZNF546Q86UE3 PDLIM2-202ENST00000308354 2236 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
ZNF546Q86UE3 FBXO25-203ENST00000352684 2360 ntTSL 5 BASIC19.15■□□□□ 0.66
ZNF546Q86UE3 SH2B1-205ENST00000538342 1532 ntTSL 2 BASIC19.15■□□□□ 0.66
ZNF546Q86UE3 PLEKHB1-201ENST00000227214 2016 ntAPPRIS ALT1 TSL 1 (best) BASIC19.15■□□□□ 0.66
ZNF546Q86UE3 AP006261.1-201ENST00000584783 668 ntBASIC19.15■□□□□ 0.66
ZNF546Q86UE3 VEGFA-226ENST00000611736 1239 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
ZNF546Q86UE3 CMTM4-201ENST00000330687 3414 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
ZNF546Q86UE3 TTC39A-203ENST00000371747 1876 ntTSL 2 BASIC19.15■□□□□ 0.66
ZNF546Q86UE3 FBRS-202ENST00000356166 5200 ntTSL 5 BASIC19.15■□□□□ 0.66
ZNF546Q86UE3 CIB2-202ENST00000539011 1511 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
ZNF546Q86UE3 ZNF668-205ENST00000426488 2282 ntTSL 5 BASIC19.14■□□□□ 0.66
ZNF546Q86UE3 SPAG7-205ENST00000573366 1668 ntTSL 3 BASIC19.14■□□□□ 0.66
ZNF546Q86UE3 SLC52A2-208ENST00000527078 1790 ntAPPRIS P1 TSL 5 BASIC19.14■□□□□ 0.66
Retrieved 100 of 98,524 protein–RNA pairs in 32.7 ms