Protein–RNA interactions for Protein: Q71U36

TUBA1A, Tubulin alpha-1A chain, humanhuman

Predictions only

Length 451 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TUBA1AQ71U36 MAPKAP1-207ENST00000394060 1586 ntTSL 1 (best) BASIC21.24■□□□□ 0.99
TUBA1AQ71U36 ANKS3-204ENST00000585773 1946 ntTSL 2 BASIC21.24■□□□□ 0.99
TUBA1AQ71U36 PPP4C-201ENST00000279387 1407 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
TUBA1AQ71U36 KRT18P60-201ENST00000312876 1297 ntBASIC21.24■□□□□ 0.99
TUBA1AQ71U36 LSR-202ENST00000354900 2105 ntAPPRIS ALT2 TSL 1 (best) BASIC21.24■□□□□ 0.99
TUBA1AQ71U36 AC008105.2-203ENST00000591361 550 ntTSL 4 BASIC21.24■□□□□ 0.99
TUBA1AQ71U36 CDR2-201ENST00000268383 2702 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
TUBA1AQ71U36 DOHH-201ENST00000427575 2031 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
TUBA1AQ71U36 KAT5-208ENST00000530446 1697 ntTSL 1 (best) BASIC21.24■□□□□ 0.99
TUBA1AQ71U36 TTBK2-205ENST00000567274 1777 ntTSL 5 BASIC21.23■□□□□ 0.99
TUBA1AQ71U36 PHACTR2-208ENST00000440869 2569 ntAPPRIS ALT2 TSL 2 BASIC21.23■□□□□ 0.99
TUBA1AQ71U36 CDKN3-202ENST00000335183 893 ntAPPRIS P2 TSL 1 (best) BASIC21.23■□□□□ 0.99
TUBA1AQ71U36 C20orf24-201ENST00000342422 896 ntTSL 2 BASIC21.23■□□□□ 0.99
TUBA1AQ71U36 C20orf24-202ENST00000344795 1114 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
TUBA1AQ71U36 LYPD6B-204ENST00000409876 1248 ntAPPRIS ALT2 TSL 1 (best) BASIC21.23■□□□□ 0.99
TUBA1AQ71U36 AC107214.1-201ENST00000457303 559 ntTSL 1 (best) BASIC21.23■□□□□ 0.99
TUBA1AQ71U36 HES4-204ENST00000484667 667 ntTSL 3 BASIC21.23■□□□□ 0.99
TUBA1AQ71U36 CDKN3-211ENST00000611205 874 ntAPPRIS ALT2 TSL 5 BASIC21.23■□□□□ 0.99
TUBA1AQ71U36 PPP1R12C-201ENST00000263433 2924 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
TUBA1AQ71U36 ARHGAP27-207ENST00000528273 2319 ntTSL 1 (best) BASIC21.23■□□□□ 0.99
TUBA1AQ71U36 LRFN4-202ENST00000393952 1550 ntTSL 5 BASIC21.23■□□□□ 0.99
TUBA1AQ71U36 LINGO3-201ENST00000585527 2241 ntAPPRIS P1 BASIC21.23■□□□□ 0.99
TUBA1AQ71U36 BIN1-202ENST00000316724 2693 ntAPPRIS P4 TSL 1 (best) BASIC21.22■□□□□ 0.99
TUBA1AQ71U36 TSSK1B-201ENST00000390666 2478 ntAPPRIS P1 BASIC21.22■□□□□ 0.99
TUBA1AQ71U36 NPTXR-201ENST00000333039 5784 ntAPPRIS ALT2 TSL 1 (best) BASIC21.22■□□□□ 0.99
TUBA1AQ71U36 KCNK13-201ENST00000282146 2522 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
TUBA1AQ71U36 PTOV1-201ENST00000391842 1875 ntAPPRIS P1 TSL 5 BASIC21.22■□□□□ 0.99
TUBA1AQ71U36 WT1-204ENST00000448076 2114 ntAPPRIS ALT2 TSL 2 BASIC21.22■□□□□ 0.99
TUBA1AQ71U36 HSPB6-202ENST00000587965 711 ntTSL 2 BASIC21.22■□□□□ 0.99
TUBA1AQ71U36 DENND1A-201ENST00000373618 3003 ntTSL 1 (best) BASIC21.22■□□□□ 0.99
TUBA1AQ71U36 ANKRD16-202ENST00000380092 1646 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
TUBA1AQ71U36 SCARA5-204ENST00000524352 1945 ntTSL 1 (best) BASIC21.21■□□□□ 0.99
TUBA1AQ71U36 AL117328.2-201ENST00000624617 1940 ntBASIC21.21■□□□□ 0.99
TUBA1AQ71U36 IL17RE-201ENST00000383814 2704 ntAPPRIS P2 TSL 1 (best) BASIC21.21■□□□□ 0.99
TUBA1AQ71U36 C1QL3-201ENST00000298943 2493 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
TUBA1AQ71U36 TMEM120A-214ENST00000493111 1456 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
TUBA1AQ71U36 CHST13-201ENST00000319340 1789 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
TUBA1AQ71U36 RBM4B-203ENST00000525754 2339 ntAPPRIS P1 TSL 2 BASIC21.21■□□□□ 0.99
TUBA1AQ71U36 WBP1-201ENST00000233615 1294 ntAPPRIS P2 TSL 1 (best) BASIC21.21■□□□□ 0.99
TUBA1AQ71U36 SDF2L1-201ENST00000248958 865 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
TUBA1AQ71U36 AC005540.1-201ENST00000413911 919 ntTSL 3 BASIC21.21■□□□□ 0.99
TUBA1AQ71U36 FAM222B-205ENST00000577682 549 ntTSL 4 BASIC21.21■□□□□ 0.99
TUBA1AQ71U36 RAB40B-201ENST00000269347 2189 ntTSL 2 BASIC21.21■□□□□ 0.99
TUBA1AQ71U36 TMED2-201ENST00000262225 2560 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
TUBA1AQ71U36 KLC1-201ENST00000246489 2294 ntAPPRIS P1 TSL 5 BASIC21.21■□□□□ 0.99
TUBA1AQ71U36 ST8SIA6-201ENST00000377602 2276 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
TUBA1AQ71U36 KLC1-224ENST00000557450 2265 ntTSL 5 BASIC21.21■□□□□ 0.99
TUBA1AQ71U36 HRK-201ENST00000257572 5789 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
TUBA1AQ71U36 UBTD1-201ENST00000370664 1706 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
TUBA1AQ71U36 NKX3-2-201ENST00000382438 2801 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
TUBA1AQ71U36 STOML1-201ENST00000316900 2169 ntTSL 2 BASIC21.2■□□□□ 0.98
TUBA1AQ71U36 ARHGDIA-203ENST00000541078 1517 ntAPPRIS P1 TSL 3 BASIC21.2■□□□□ 0.98
TUBA1AQ71U36 IFI30-201ENST00000407280 1134 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
TUBA1AQ71U36 PSMG4-207ENST00000451246 824 ntTSL 3 BASIC21.2■□□□□ 0.98
TUBA1AQ71U36 SLC25A42-201ENST00000318596 3120 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
TUBA1AQ71U36 PCSK6-220ENST00000622483 3132 ntAPPRIS ALT2 TSL 1 (best) BASIC21.2■□□□□ 0.98
TUBA1AQ71U36 CCDC9-201ENST00000221922 2093 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
TUBA1AQ71U36 E2F5-202ENST00000416274 1728 ntAPPRIS P4 TSL 1 (best) BASIC21.2■□□□□ 0.98
TUBA1AQ71U36 LHX2-201ENST00000373615 2554 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
TUBA1AQ71U36 SCRT2-201ENST00000246104 3577 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
TUBA1AQ71U36 DMRT2-209ENST00000635183 2190 ntTSL 5 BASIC21.19■□□□□ 0.98
TUBA1AQ71U36 SPNS1-207ENST00000565975 1979 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
TUBA1AQ71U36 PCYT2-204ENST00000570388 1474 ntTSL 2 BASIC21.19■□□□□ 0.98
TUBA1AQ71U36 DES-201ENST00000373960 2248 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
TUBA1AQ71U36 ALKAL1-201ENST00000358543 1217 ntAPPRIS P2 TSL 1 (best) BASIC21.18■□□□□ 0.98
TUBA1AQ71U36 SNX5-219ENST00000606602 885 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
TUBA1AQ71U36 GAL3ST2-201ENST00000192314 1370 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
TUBA1AQ71U36 CACNA1H-202ENST00000358590 8069 ntAPPRIS ALT2 TSL 5 BASIC21.18■□□□□ 0.98
TUBA1AQ71U36 ZAR1-201ENST00000327939 1460 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
TUBA1AQ71U36 AC011511.4-201ENST00000586529 1850 ntAPPRIS P1 TSL 5 BASIC21.18■□□□□ 0.98
TUBA1AQ71U36 CASP9-201ENST00000333868 2019 ntAPPRIS P2 TSL 1 (best) BASIC21.17■□□□□ 0.98
TUBA1AQ71U36 ANKRD20A11P-201ENST00000344693 1088 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
TUBA1AQ71U36 RIPPLY2-202ENST00000369689 664 ntAPPRIS P2 TSL 1 (best) BASIC21.17■□□□□ 0.98
TUBA1AQ71U36 C20orf24-203ENST00000373852 1059 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
TUBA1AQ71U36 AC073188.6-202ENST00000616616 2281 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
TUBA1AQ71U36 SHMT1-201ENST00000316694 2464 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
TUBA1AQ71U36 ITM2C-202ENST00000326427 2078 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
TUBA1AQ71U36 TXNRD2-201ENST00000334363 1893 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
TUBA1AQ71U36 TST-202ENST00000403892 1797 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
TUBA1AQ71U36 HMGA2-201ENST00000354636 1529 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
TUBA1AQ71U36 WDR38-202ENST00000613760 1323 ntAPPRIS ALT2 TSL 1 (best) BASIC21.16■□□□□ 0.98
TUBA1AQ71U36 OXLD1-201ENST00000374741 620 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
TUBA1AQ71U36 KCTD5-202ENST00000564195 774 ntTSL 5 BASIC21.16■□□□□ 0.98
TUBA1AQ71U36 LTBP3-212ENST00000529189 1997 ntTSL 2 BASIC21.16■□□□□ 0.98
TUBA1AQ71U36 TMEM104-205ENST00000582773 1740 ntTSL 2 BASIC21.15■□□□□ 0.98
TUBA1AQ71U36 WTAP-207ENST00000631126 1430 ntTSL 3 BASIC21.15■□□□□ 0.98
TUBA1AQ71U36 RNASET2-210ENST00000508775 1375 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
TUBA1AQ71U36 DONSON-201ENST00000303071 2170 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
TUBA1AQ71U36 NKX2-1-201ENST00000354822 2191 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
TUBA1AQ71U36 PTH1R-207ENST00000449590 2123 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
TUBA1AQ71U36 SPCS2P3-201ENST00000500401 656 ntBASIC21.15■□□□□ 0.98
TUBA1AQ71U36 C11orf96-203ENST00000617612 1294 ntAPPRIS P1 BASIC21.15■□□□□ 0.98
TUBA1AQ71U36 GNAS-AS1_1.1-201ENST00000621898 103 ntBASIC21.15■□□□□ 0.98
TUBA1AQ71U36 AC129492.7-201ENST00000622992 756 ntBASIC21.15■□□□□ 0.98
TUBA1AQ71U36 FAM129C-211ENST00000600871 1822 ntAPPRIS ALT2 TSL 5 BASIC21.15■□□□□ 0.98
TUBA1AQ71U36 ARSB-206ENST00000565165 1772 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
TUBA1AQ71U36 CACNA1H-210ENST00000638323 8048 ntAPPRIS ALT2 TSL 5 BASIC21.15■□□□□ 0.98
TUBA1AQ71U36 HACD1-202ENST00000361271 2237 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.98
TUBA1AQ71U36 SLC2A8-203ENST00000373371 2172 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.98
TUBA1AQ71U36 EIF5A-211ENST00000576930 1439 ntAPPRIS P1 TSL 5 BASIC21.14■□□□□ 0.98
Retrieved 100 of 98,524 protein–RNA pairs in 14.3 ms