Protein–RNA interactions for Protein: Q6PIV2

FOXR1, Forkhead box protein R1, humanhuman

Predictions only

Length 292 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FOXR1Q6PIV2 AL592293.1-201ENST00000502889 1188 ntBASIC24.04■■□□□ 1.44
FOXR1Q6PIV2 SEC11C-204ENST00000587834 1202 ntAPPRIS P1 TSL 1 (best) BASIC24.04■■□□□ 1.44
FOXR1Q6PIV2 KLC1-227ENST00000634686 2229 ntTSL 5 BASIC24.04■■□□□ 1.44
FOXR1Q6PIV2 ITGB1BP1-203ENST00000359712 2126 ntTSL 2 BASIC24.04■■□□□ 1.44
FOXR1Q6PIV2 PTH1R-207ENST00000449590 2123 ntAPPRIS P1 TSL 1 (best) BASIC24.04■■□□□ 1.44
FOXR1Q6PIV2 ZBTB46-202ENST00000302995 2335 ntAPPRIS P1 TSL 2 BASIC24.04■■□□□ 1.44
FOXR1Q6PIV2 TPRN-202ENST00000409012 2718 ntAPPRIS P2 TSL 1 (best) BASIC24.04■■□□□ 1.44
FOXR1Q6PIV2 PSMG3-202ENST00000288607 1391 ntAPPRIS P1 TSL 1 (best) BASIC24.03■■□□□ 1.44
FOXR1Q6PIV2 TMEM200B-201ENST00000420504 2553 ntAPPRIS P1 TSL 1 (best) BASIC24.03■■□□□ 1.44
FOXR1Q6PIV2 EIF5A-211ENST00000576930 1439 ntAPPRIS P1 TSL 5 BASIC24.03■■□□□ 1.44
FOXR1Q6PIV2 SLC25A10-202ENST00000350690 1885 ntAPPRIS P1 TSL 1 (best) BASIC24.03■■□□□ 1.44
FOXR1Q6PIV2 NKX6-3-202ENST00000524115 1683 ntTSL 2 BASIC24.03■■□□□ 1.44
FOXR1Q6PIV2 PKM-201ENST00000319622 2717 ntAPPRIS P5 TSL 2 BASIC24.03■■□□□ 1.44
FOXR1Q6PIV2 SLC52A2-211ENST00000532887 2147 ntAPPRIS P1 TSL 5 BASIC24.03■■□□□ 1.44
FOXR1Q6PIV2 AC138207.2-201ENST00000583377 492 ntTSL 2 BASIC24.03■■□□□ 1.44
FOXR1Q6PIV2 SPNS1-207ENST00000565975 1979 ntTSL 1 (best) BASIC24.03■■□□□ 1.44
FOXR1Q6PIV2 VGF-202ENST00000445482 2477 ntAPPRIS P1 TSL 5 BASIC24.03■■□□□ 1.44
FOXR1Q6PIV2 ELOC-206ENST00000520242 1573 ntAPPRIS P1 TSL 1 (best) BASIC24.03■■□□□ 1.44
FOXR1Q6PIV2 RCCD1-203ENST00000555155 1871 ntAPPRIS ALT1 TSL 5 BASIC24.02■■□□□ 1.44
FOXR1Q6PIV2 AL121899.1-202ENST00000411839 536 ntTSL 5 BASIC24.02■■□□□ 1.44
FOXR1Q6PIV2 HES4-204ENST00000484667 667 ntTSL 3 BASIC24.02■■□□□ 1.44
FOXR1Q6PIV2 NIPSNAP1-201ENST00000216121 2237 ntAPPRIS P1 TSL 1 (best) BASIC24.02■■□□□ 1.44
FOXR1Q6PIV2 NEK6-214ENST00000545174 2573 ntAPPRIS P1 TSL 1 (best) BASIC24.01■■□□□ 1.43
FOXR1Q6PIV2 ABHD6-201ENST00000295962 2393 ntAPPRIS P1 TSL 1 (best) BASIC24.01■■□□□ 1.43
FOXR1Q6PIV2 KLC3-202ENST00000470402 1820 ntTSL 1 (best) BASIC24.01■■□□□ 1.43
FOXR1Q6PIV2 AC009831.1-201ENST00000580420 1582 ntBASIC24.01■■□□□ 1.43
FOXR1Q6PIV2 VIPR2-204ENST00000421760 717 ntTSL 3 BASIC24.01■■□□□ 1.43
FOXR1Q6PIV2 DLL3-201ENST00000205143 2332 ntTSL 1 (best) BASIC24.01■■□□□ 1.43
FOXR1Q6PIV2 KCNMA1-283ENST00000640523 5425 ntAPPRIS ALT2 TSL 5 BASIC24.01■■□□□ 1.43
FOXR1Q6PIV2 SMOX-201ENST00000278795 2164 ntTSL 1 (best) BASIC24.01■■□□□ 1.43
FOXR1Q6PIV2 BBC3-203ENST00000439096 1838 ntAPPRIS P1 TSL 1 (best) BASIC24■■□□□ 1.43
FOXR1Q6PIV2 AL359258.2-201ENST00000564063 1566 ntBASIC24■■□□□ 1.43
FOXR1Q6PIV2 PEBP1-201ENST00000261313 1697 ntAPPRIS P1 TSL 1 (best) BASIC24■■□□□ 1.43
FOXR1Q6PIV2 PROSER2-202ENST00000379200 1232 ntAPPRIS ALT2 BASIC24■■□□□ 1.43
FOXR1Q6PIV2 TBX2-AS1-203ENST00000590421 861 ntTSL 2 BASIC24■■□□□ 1.43
FOXR1Q6PIV2 ABCB10P4-201ENST00000566803 2184 ntBASIC24■■□□□ 1.43
FOXR1Q6PIV2 SLC25A23-203ENST00000334510 1424 ntTSL 1 (best) BASIC24■■□□□ 1.43
FOXR1Q6PIV2 NEIL1-206ENST00000564784 2019 ntAPPRIS P1 TSL 2 BASIC24■■□□□ 1.43
FOXR1Q6PIV2 NHLH1-201ENST00000302101 2563 ntAPPRIS P1 TSL 1 (best) BASIC23.99■■□□□ 1.43
FOXR1Q6PIV2 AL121987.2-201ENST00000418602 1578 ntTSL 2 BASIC23.99■■□□□ 1.43
FOXR1Q6PIV2 UPF3A-201ENST00000351487 2235 ntTSL 1 (best) BASIC23.99■■□□□ 1.43
FOXR1Q6PIV2 DACT3-202ENST00000391916 2834 ntAPPRIS P1 TSL 5 BASIC23.99■■□□□ 1.43
FOXR1Q6PIV2 LYPD6B-204ENST00000409876 1248 ntAPPRIS ALT2 TSL 1 (best) BASIC23.99■■□□□ 1.43
FOXR1Q6PIV2 FLVCR1-AS1-203ENST00000426161 892 ntTSL 1 (best) BASIC23.99■■□□□ 1.43
FOXR1Q6PIV2 ANO1-202ENST00000355303 4790 ntAPPRIS P2 TSL 1 (best) BASIC23.99■■□□□ 1.43
FOXR1Q6PIV2 GSR-205ENST00000541648 1410 ntTSL 1 (best) BASIC23.99■■□□□ 1.43
FOXR1Q6PIV2 SMPD5-203ENST00000639008 1464 ntBASIC23.99■■□□□ 1.43
FOXR1Q6PIV2 SARDH-203ENST00000371868 2266 ntTSL 2 BASIC23.99■■□□□ 1.43
FOXR1Q6PIV2 NKX6-2-201ENST00000368592 2673 ntAPPRIS P1 TSL 1 (best) BASIC23.98■■□□□ 1.43
FOXR1Q6PIV2 PSMG4-206ENST00000438998 838 ntAPPRIS P1 TSL 2 BASIC23.98■■□□□ 1.43
FOXR1Q6PIV2 UBE2I-213ENST00000566587 1098 ntAPPRIS P1 TSL 2 BASIC23.98■■□□□ 1.43
FOXR1Q6PIV2 C1QTNF1-206ENST00000579760 1672 ntAPPRIS P1 TSL 1 (best) BASIC23.98■■□□□ 1.43
FOXR1Q6PIV2 KRT72-202ENST00000354310 1764 ntTSL 2 BASIC23.98■■□□□ 1.43
FOXR1Q6PIV2 PPP1R26-201ENST00000356818 4932 ntAPPRIS P1 TSL 1 (best) BASIC23.98■■□□□ 1.43
FOXR1Q6PIV2 FNTA-201ENST00000302279 1840 ntAPPRIS P1 TSL 1 (best) BASIC23.97■■□□□ 1.43
FOXR1Q6PIV2 SPSB3-208ENST00000566339 1784 ntAPPRIS P1 TSL 1 (best) BASIC23.97■■□□□ 1.43
FOXR1Q6PIV2 C16orf52-207ENST00000569656 1257 ntTSL 5 BASIC23.97■■□□□ 1.43
FOXR1Q6PIV2 KCNIP2-206ENST00000356640 1989 ntTSL 1 (best) BASIC23.96■■□□□ 1.43
FOXR1Q6PIV2 TYMP-201ENST00000252029 1630 ntAPPRIS P3 TSL 1 (best) BASIC23.96■■□□□ 1.43
FOXR1Q6PIV2 CTCF-202ENST00000401394 2978 ntTSL 1 (best) BASIC23.96■■□□□ 1.43
FOXR1Q6PIV2 PTGER1-201ENST00000292513 1421 ntAPPRIS P1 TSL 1 (best) BASIC23.96■■□□□ 1.43
FOXR1Q6PIV2 KDM4C-203ENST00000401787 1406 ntTSL 1 (best) BASIC23.96■■□□□ 1.43
FOXR1Q6PIV2 SSTR5-201ENST00000293897 1362 ntAPPRIS P1 BASIC23.96■■□□□ 1.43
FOXR1Q6PIV2 WBP1-202ENST00000393972 1325 ntTSL 2 BASIC23.96■■□□□ 1.43
FOXR1Q6PIV2 PYY2-202ENST00000441253 1076 ntTSL 1 (best) BASIC23.96■■□□□ 1.43
FOXR1Q6PIV2 RPL27A-206ENST00000530022 878 ntTSL 1 (best) BASIC23.96■■□□□ 1.43
FOXR1Q6PIV2 MPPED1-203ENST00000443721 2507 ntAPPRIS P1 TSL 2 BASIC23.96■■□□□ 1.43
FOXR1Q6PIV2 PRPSAP2-201ENST00000268835 1910 ntAPPRIS P1 TSL 1 (best) BASIC23.96■■□□□ 1.43
FOXR1Q6PIV2 AP000802.1-201ENST00000500537 1934 ntTSL 1 (best) BASIC23.96■■□□□ 1.43
FOXR1Q6PIV2 MEIS2-207ENST00000557796 2666 ntTSL 5 BASIC23.96■■□□□ 1.43
FOXR1Q6PIV2 GATA2-AS1-202ENST00000468377 1578 ntTSL 2 BASIC23.95■■□□□ 1.43
FOXR1Q6PIV2 GFI1-203ENST00000427103 2693 ntAPPRIS P1 TSL 1 (best) BASIC23.95■■□□□ 1.42
FOXR1Q6PIV2 PTPA-210ENST00000414510 1153 ntTSL 1 (best) BASIC23.95■■□□□ 1.42
FOXR1Q6PIV2 BHLHE23-202ENST00000612929 1109 ntBASIC23.95■■□□□ 1.42
FOXR1Q6PIV2 ARPC2-202ENST00000315717 1505 ntAPPRIS P1 TSL 1 (best) BASIC23.94■■□□□ 1.42
FOXR1Q6PIV2 RAD51-208ENST00000532743 1515 ntTSL 2 BASIC23.94■■□□□ 1.42
FOXR1Q6PIV2 MRPL4-201ENST00000253099 1455 ntAPPRIS P2 TSL 1 (best) BASIC23.94■■□□□ 1.42
FOXR1Q6PIV2 CMTM4-201ENST00000330687 3414 ntTSL 1 (best) BASIC23.94■■□□□ 1.42
FOXR1Q6PIV2 TMEFF1-201ENST00000374879 2611 ntAPPRIS P1 TSL 1 (best) BASIC23.94■■□□□ 1.42
FOXR1Q6PIV2 COPRS-201ENST00000302362 968 ntAPPRIS P1 TSL 1 (best) BASIC23.94■■□□□ 1.42
FOXR1Q6PIV2 TTC36-201ENST00000302783 874 ntAPPRIS P1 TSL 1 (best) BASIC23.94■■□□□ 1.42
FOXR1Q6PIV2 NSMCE4A-201ENST00000369017 1224 ntTSL 1 (best) BASIC23.94■■□□□ 1.42
FOXR1Q6PIV2 TSPAN17-207ENST00000508164 2457 ntTSL 1 (best) BASIC23.94■■□□□ 1.42
FOXR1Q6PIV2 TMEM259-201ENST00000333175 2581 ntAPPRIS P3 TSL 1 (best) BASIC23.94■■□□□ 1.42
FOXR1Q6PIV2 MFSD5-201ENST00000329548 1760 ntAPPRIS P1 TSL 1 (best) BASIC23.93■■□□□ 1.42
FOXR1Q6PIV2 QKI-207ENST00000453779 5685 ntTSL 1 (best) BASIC23.93■■□□□ 1.42
FOXR1Q6PIV2 CNTFR-201ENST00000351266 1910 ntAPPRIS P1 TSL 1 (best) BASIC23.93■■□□□ 1.42
FOXR1Q6PIV2 NKX2-1-201ENST00000354822 2191 ntTSL 1 (best) BASIC23.93■■□□□ 1.42
FOXR1Q6PIV2 CACYBP-201ENST00000367679 2766 ntAPPRIS P1 TSL 1 (best) BASIC23.93■■□□□ 1.42
FOXR1Q6PIV2 SLC25A24-204ENST00000569674 2357 ntBASIC23.93■■□□□ 1.42
FOXR1Q6PIV2 C6orf136-201ENST00000293604 1978 ntTSL 1 (best) BASIC23.92■■□□□ 1.42
FOXR1Q6PIV2 NFE2L3P1-201ENST00000588207 1959 ntBASIC23.92■■□□□ 1.42
FOXR1Q6PIV2 SKIDA1-201ENST00000444772 2667 ntAPPRIS ALT2 TSL 5 BASIC23.92■■□□□ 1.42
FOXR1Q6PIV2 PCYT2-201ENST00000331285 2147 ntTSL 2 BASIC23.92■■□□□ 1.42
FOXR1Q6PIV2 REPIN1-214ENST00000489432 2058 ntAPPRIS ALT2 TSL 2 BASIC23.92■■□□□ 1.42
FOXR1Q6PIV2 NELFCD-213ENST00000602795 2305 ntAPPRIS P1 TSL 1 (best) BASIC23.92■■□□□ 1.42
FOXR1Q6PIV2 RSPO4-202ENST00000400634 722 ntTSL 1 (best) BASIC23.92■■□□□ 1.42
FOXR1Q6PIV2 CLEC11A-201ENST00000250340 1419 ntAPPRIS P1 TSL 1 (best) BASIC23.92■■□□□ 1.42
FOXR1Q6PIV2 EGR4-202ENST00000545030 2372 ntAPPRIS P2 TSL 1 (best) BASIC23.92■■□□□ 1.42
FOXR1Q6PIV2 SOWAHD-201ENST00000343905 1552 ntAPPRIS P1 BASIC23.91■■□□□ 1.42
Retrieved 100 of 98,524 protein–RNA pairs in 22.9 ms