Protein–RNA interactions for Protein: Q6PI97

C11orf88, UPF0722 protein C11orf88, humanhuman

Predictions only

Length 169 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
C11orf88Q6PI97 HSD17B1-202ENST00000585807 4982 ntAPPRIS P3 TSL 1 (best) BASIC19.99■□□□□ 0.79
C11orf88Q6PI97 USF3-203ENST00000491165 2133 ntAPPRIS ALT2 TSL 1 (best) BASIC19.99■□□□□ 0.79
C11orf88Q6PI97 TMEM98-206ENST00000579849 4434 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
C11orf88Q6PI97 RGS19-201ENST00000332298 1510 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
C11orf88Q6PI97 NKX2-3-202ENST00000622383 1986 ntTSL 5 BASIC19.99■□□□□ 0.79
C11orf88Q6PI97 CDIPT-201ENST00000219789 2353 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
C11orf88Q6PI97 OBSL1-204ENST00000404537 5841 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
C11orf88Q6PI97 KIF13A-207ENST00000502704 1330 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
C11orf88Q6PI97 FBXW5-201ENST00000325285 2274 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
C11orf88Q6PI97 PMS1-220ENST00000618056 1468 ntTSL 5 BASIC19.99■□□□□ 0.79
C11orf88Q6PI97 AMZ2-202ENST00000359904 2402 ntAPPRIS P1 TSL 2 BASIC19.98■□□□□ 0.79
C11orf88Q6PI97 MYBL2-201ENST00000217026 2639 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
C11orf88Q6PI97 IRX5-201ENST00000320990 2061 ntAPPRIS ALT1 TSL 1 (best) BASIC19.98■□□□□ 0.79
C11orf88Q6PI97 DAZAP1-205ENST00000587079 2086 ntAPPRIS ALT1 TSL 5 BASIC19.98■□□□□ 0.79
C11orf88Q6PI97 MXD3-201ENST00000423571 1534 ntTSL 2 BASIC19.98■□□□□ 0.79
C11orf88Q6PI97 GADD45A-205ENST00000617962 1142 ntTSL 1 (best) BASIC19.98■□□□□ 0.79
C11orf88Q6PI97 PCSK6-217ENST00000618548 4269 ntAPPRIS ALT2 TSL 1 (best) BASIC19.98■□□□□ 0.79
C11orf88Q6PI97 RRP9-201ENST00000232888 1578 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
C11orf88Q6PI97 GP1BB-201ENST00000366425 1553 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
C11orf88Q6PI97 CRELD2-203ENST00000404488 1577 ntAPPRIS ALT2 TSL 1 (best) BASIC19.98■□□□□ 0.79
C11orf88Q6PI97 IL17RE-201ENST00000383814 2704 ntAPPRIS P2 TSL 1 (best) BASIC19.98■□□□□ 0.79
C11orf88Q6PI97 DENND6A-201ENST00000311128 4655 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
C11orf88Q6PI97 CDC34-201ENST00000215574 1471 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
C11orf88Q6PI97 FKBP1A-204ENST00000400137 1622 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
C11orf88Q6PI97 SOX11-201ENST00000322002 8719 ntAPPRIS P1 BASIC19.98■□□□□ 0.79
C11orf88Q6PI97 EPB41L4A-AS2-201ENST00000623705 1396 ntBASIC19.97■□□□□ 0.79
C11orf88Q6PI97 KCNAB3-201ENST00000303790 2458 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
C11orf88Q6PI97 USP36-203ENST00000542802 6063 ntAPPRIS P2 TSL 1 (best) BASIC19.97■□□□□ 0.79
C11orf88Q6PI97 GAL3ST3-203ENST00000527878 1599 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
C11orf88Q6PI97 TNFRSF4-201ENST00000379236 1068 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
C11orf88Q6PI97 EPHA10-202ENST00000373048 5425 ntAPPRIS P2 TSL 5 BASIC19.97■□□□□ 0.79
C11orf88Q6PI97 PTPMT1-205ENST00000534775 1611 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
C11orf88Q6PI97 PPP2R2C-203ENST00000382599 1807 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
C11orf88Q6PI97 H2AFY-217ENST00000511689 2789 ntAPPRIS P4 TSL 1 (best) BASIC19.96■□□□□ 0.79
C11orf88Q6PI97 BBC3-203ENST00000439096 1838 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
C11orf88Q6PI97 CTSF-201ENST00000310325 2035 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
C11orf88Q6PI97 CABP1-202ENST00000316803 1658 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
C11orf88Q6PI97 MGAT5B-209ENST00000569840 4492 ntAPPRIS ALT1 TSL 5 BASIC19.96■□□□□ 0.79
C11orf88Q6PI97 ZFAND4-205ENST00000374371 2283 ntTSL 5 BASIC19.96■□□□□ 0.79
C11orf88Q6PI97 CAMK1D-203ENST00000615792 1725 ntTSL 5 BASIC19.96■□□□□ 0.79
C11orf88Q6PI97 MROH6-210ENST00000533679 1921 ntAPPRIS ALT2 TSL 1 (best) BASIC19.96■□□□□ 0.79
C11orf88Q6PI97 PHACTR2-208ENST00000440869 2569 ntAPPRIS ALT2 TSL 2 BASIC19.95■□□□□ 0.78
C11orf88Q6PI97 ASRGL1-202ENST00000415229 2270 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
C11orf88Q6PI97 AQP1-203ENST00000409899 1009 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
C11orf88Q6PI97 TMEM114-202ENST00000568335 899 ntTSL 3 BASIC19.95■□□□□ 0.78
C11orf88Q6PI97 GALNT13-201ENST00000392825 5536 ntAPPRIS P1 TSL 2 BASIC19.95■□□□□ 0.78
C11orf88Q6PI97 FNTA-201ENST00000302279 1840 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
C11orf88Q6PI97 PDIA6-207ENST00000540494 2509 ntAPPRIS ALT1 TSL 2 BASIC19.95■□□□□ 0.78
C11orf88Q6PI97 ECE2-202ENST00000357474 2667 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
C11orf88Q6PI97 BFSP1-202ENST00000377873 2207 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
C11orf88Q6PI97 RHOBTB3-201ENST00000379982 5537 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
C11orf88Q6PI97 MFSD5-201ENST00000329548 1760 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
C11orf88Q6PI97 AC060814.1-201ENST00000554326 538 ntBASIC19.94■□□□□ 0.78
C11orf88Q6PI97 NTF6A-201ENST00000591175 560 ntBASIC19.94■□□□□ 0.78
C11orf88Q6PI97 POLR2J2-202ENST00000358438 2065 ntAPPRIS ALT2 TSL 1 (best) BASIC19.94■□□□□ 0.78
C11orf88Q6PI97 POLR2J3-220ENST00000613744 2096 ntAPPRIS ALT2 TSL 1 (best) BASIC19.94■□□□□ 0.78
C11orf88Q6PI97 MAGED2-206ENST00000375068 2189 ntAPPRIS P2 TSL 1 (best) BASIC19.94■□□□□ 0.78
C11orf88Q6PI97 EVC-201ENST00000264956 6431 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
C11orf88Q6PI97 CACNA1I-204ENST00000407673 5952 ntAPPRIS ALT2 TSL 1 (best) BASIC19.93■□□□□ 0.78
C11orf88Q6PI97 ATOH7-201ENST00000373673 1480 ntAPPRIS P1 BASIC19.93■□□□□ 0.78
C11orf88Q6PI97 COMT-204ENST00000403710 1548 ntAPPRIS P3 TSL 5 BASIC19.93■□□□□ 0.78
C11orf88Q6PI97 ALDH16A1-203ENST00000540132 2174 ntTSL 2 BASIC19.93■□□□□ 0.78
C11orf88Q6PI97 WIPI2-202ENST00000382384 1948 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
C11orf88Q6PI97 AP000802.1-201ENST00000500537 1934 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
C11orf88Q6PI97 AMER2-202ENST00000515384 3197 ntAPPRIS P1 BASIC19.93■□□□□ 0.78
C11orf88Q6PI97 KCNK13-201ENST00000282146 2522 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
C11orf88Q6PI97 SORCS2-203ENST00000507866 6152 ntAPPRIS P2 TSL 1 (best) BASIC19.93■□□□□ 0.78
C11orf88Q6PI97 KLC3-202ENST00000470402 1820 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
C11orf88Q6PI97 LDB1-201ENST00000361198 2285 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
C11orf88Q6PI97 ADGRA2-201ENST00000315215 6270 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
C11orf88Q6PI97 SOX4-201ENST00000244745 5852 ntAPPRIS P1 BASIC19.92■□□□□ 0.78
C11orf88Q6PI97 HOXD-AS2-201ENST00000426965 927 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
C11orf88Q6PI97 CMPK2-203ENST00000458098 1224 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
C11orf88Q6PI97 REEP6-201ENST00000233596 1794 ntAPPRIS P2 TSL 1 (best) BASIC19.92■□□□□ 0.78
C11orf88Q6PI97 CCND3-205ENST00000415497 1843 ntTSL 2 BASIC19.92■□□□□ 0.78
C11orf88Q6PI97 MAPKAP1-207ENST00000394060 1586 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
C11orf88Q6PI97 ARPC2-201ENST00000295685 1605 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
C11orf88Q6PI97 AFDN-AS1-201ENST00000359760 2238 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
C11orf88Q6PI97 ME2-208ENST00000638937 2471 ntTSL 5 BASIC19.91■□□□□ 0.78
C11orf88Q6PI97 PXMP2-201ENST00000317479 957 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
C11orf88Q6PI97 HSD11B2-201ENST00000326152 1900 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
C11orf88Q6PI97 ARG2-201ENST00000261783 2045 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
C11orf88Q6PI97 ACTL10-201ENST00000330271 2028 ntAPPRIS P1 BASIC19.91■□□□□ 0.78
C11orf88Q6PI97 RAD51-210ENST00000557850 1397 ntTSL 2 BASIC19.91■□□□□ 0.78
C11orf88Q6PI97 CACNA1A-246ENST00000637736 8340 ntAPPRIS ALT2 TSL 5 BASIC19.91■□□□□ 0.78
C11orf88Q6PI97 SLC25A23-203ENST00000334510 1424 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
C11orf88Q6PI97 DHRS13-203ENST00000426464 1569 ntTSL 2 BASIC19.91■□□□□ 0.78
C11orf88Q6PI97 BRSK2-212ENST00000531197 3163 ntAPPRIS ALT2 TSL 1 (best) BASIC19.91■□□□□ 0.78
C11orf88Q6PI97 CHST13-201ENST00000319340 1789 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
C11orf88Q6PI97 BAZ1B-202ENST00000404251 5428 ntAPPRIS P1 TSL 2 BASIC19.9■□□□□ 0.78
C11orf88Q6PI97 KCNS1-202ENST00000537075 2136 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
C11orf88Q6PI97 KLC1-201ENST00000246489 2294 ntAPPRIS P1 TSL 5 BASIC19.9■□□□□ 0.78
C11orf88Q6PI97 KLC1-224ENST00000557450 2265 ntTSL 5 BASIC19.9■□□□□ 0.78
C11orf88Q6PI97 DLGAP4-204ENST00000373913 5056 ntAPPRIS P4 TSL 1 (best) BASIC19.9■□□□□ 0.78
C11orf88Q6PI97 MCCD1-201ENST00000376191 955 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
C11orf88Q6PI97 NEURL1B-203ENST00000522853 1263 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
C11orf88Q6PI97 TBX2-AS1-202ENST00000589814 539 ntTSL 3 BASIC19.9■□□□□ 0.78
C11orf88Q6PI97 MAML1-201ENST00000292599 5723 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
C11orf88Q6PI97 NKX6-3-202ENST00000524115 1683 ntTSL 2 BASIC19.9■□□□□ 0.78
C11orf88Q6PI97 TTBK2-205ENST00000567274 1777 ntTSL 5 BASIC19.9■□□□□ 0.78
Retrieved 100 of 98,524 protein–RNA pairs in 14.1 ms