Protein–RNA interactions for Protein: Q5TH69

ARFGEF3, Brefeldin A-inhibited guanine nucleotide-exchange protein 3, humanhuman

Predictions only

Length 2,177 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ARFGEF3Q5TH69 OXSR1-203ENST00000446845 1908 ntTSL 5 BASIC19.79■□□□□ 0.76
ARFGEF3Q5TH69 RBMXL2-201ENST00000306904 1874 ntAPPRIS P1 BASIC19.79■□□□□ 0.76
ARFGEF3Q5TH69 PHF11-202ENST00000378319 1359 ntAPPRIS P3 TSL 1 (best) BASIC19.79■□□□□ 0.76
ARFGEF3Q5TH69 SKOR2-203ENST00000620245 3048 ntAPPRIS ALT2 TSL 5 BASIC19.79■□□□□ 0.76
ARFGEF3Q5TH69 AC091060.1-201ENST00000623524 1766 ntBASIC19.79■□□□□ 0.76
ARFGEF3Q5TH69 TRIM7-202ENST00000334421 1228 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
ARFGEF3Q5TH69 TFPT-201ENST00000391757 774 ntTSL 5 BASIC19.79■□□□□ 0.76
ARFGEF3Q5TH69 TFPT-202ENST00000391758 804 ntAPPRIS ALT2 TSL 1 (best) BASIC19.79■□□□□ 0.76
ARFGEF3Q5TH69 CLTA-204ENST00000433436 1235 ntAPPRIS ALT1 TSL 1 (best) BASIC19.79■□□□□ 0.76
ARFGEF3Q5TH69 CLTA-209ENST00000538225 1181 ntTSL 2 BASIC19.79■□□□□ 0.76
ARFGEF3Q5TH69 EPHA10-211ENST00000540011 720 ntTSL 5 BASIC19.79■□□□□ 0.76
ARFGEF3Q5TH69 CLTA-210ENST00000540080 989 ntTSL 2 BASIC19.79■□□□□ 0.76
ARFGEF3Q5TH69 ST3GAL5-214ENST00000638178 2034 ntTSL 5 BASIC19.79■□□□□ 0.76
ARFGEF3Q5TH69 RPUSD1-201ENST00000007264 2050 ntAPPRIS P1 TSL 2 BASIC19.79■□□□□ 0.76
ARFGEF3Q5TH69 MAST4-206ENST00000406374 1066 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
ARFGEF3Q5TH69 CLTA-206ENST00000466396 695 ntTSL 2 BASIC19.78■□□□□ 0.76
ARFGEF3Q5TH69 ERGIC1-206ENST00000519860 1000 ntTSL 3 BASIC19.78■□□□□ 0.76
ARFGEF3Q5TH69 PRSS21-201ENST00000005995 1101 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
ARFGEF3Q5TH69 RNF225-201ENST00000601382 990 ntAPPRIS P1 BASIC19.78■□□□□ 0.76
ARFGEF3Q5TH69 FAM228B-208ENST00000613899 1238 ntAPPRIS ALT2 TSL 1 (best) BASIC19.78■□□□□ 0.76
ARFGEF3Q5TH69 TMEM179-204ENST00000556573 1430 ntAPPRIS P1 TSL 3 BASIC19.78■□□□□ 0.76
ARFGEF3Q5TH69 EEF1D-203ENST00000419152 1452 ntAPPRIS ALT2 TSL 5 BASIC19.78■□□□□ 0.76
ARFGEF3Q5TH69 ALG2-203ENST00000476832 1880 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
ARFGEF3Q5TH69 DYRK2-203ENST00000393555 2209 ntAPPRIS ALT1 TSL 1 (best) BASIC19.78■□□□□ 0.76
ARFGEF3Q5TH69 C11orf91-201ENST00000379011 811 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
ARFGEF3Q5TH69 AC019163.1-201ENST00000512634 610 ntTSL 2 BASIC19.78■□□□□ 0.76
ARFGEF3Q5TH69 AL356740.2-201ENST00000601559 647 ntBASIC19.78■□□□□ 0.76
ARFGEF3Q5TH69 KRTAP5-4-202ENST00000616115 660 ntAPPRIS ALT2 TSL 5 BASIC19.78■□□□□ 0.76
ARFGEF3Q5TH69 TMEM240-203ENST00000624426 796 ntTSL 3 BASIC19.78■□□□□ 0.76
ARFGEF3Q5TH69 MATK-204ENST00000585778 1994 ntAPPRIS ALT2 TSL 1 (best) BASIC19.77■□□□□ 0.76
ARFGEF3Q5TH69 KIAA1456-206ENST00000528753 2392 ntTSL 2 BASIC19.77■□□□□ 0.76
ARFGEF3Q5TH69 LRMDA-215ENST00000611255 1040 ntAPPRIS ALT2 TSL 5 BASIC19.77■□□□□ 0.75
ARFGEF3Q5TH69 ARHGAP29-202ENST00000370217 2043 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
ARFGEF3Q5TH69 C7orf25-206ENST00000447342 1823 ntTSL 2 BASIC19.76■□□□□ 0.75
ARFGEF3Q5TH69 SMOX-203ENST00000339123 2074 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
ARFGEF3Q5TH69 TMEM134-202ENST00000393877 823 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
ARFGEF3Q5TH69 IL15RA-209ENST00000397255 759 ntAPPRIS ALT2 TSL 5 BASIC19.76■□□□□ 0.75
ARFGEF3Q5TH69 NKX2-5-202ENST00000424406 1124 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
ARFGEF3Q5TH69 IL15RA-216ENST00000530685 660 ntTSL 5 BASIC19.76■□□□□ 0.75
ARFGEF3Q5TH69 C17orf74-202ENST00000574034 1287 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
ARFGEF3Q5TH69 AC110285.6-201ENST00000617652 491 ntBASIC19.76■□□□□ 0.75
ARFGEF3Q5TH69 AC243829.1-202ENST00000618848 486 ntTSL 3 BASIC19.76■□□□□ 0.75
ARFGEF3Q5TH69 CRACR2B-202ENST00000525077 1578 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
ARFGEF3Q5TH69 TSPAN13-201ENST00000262067 2093 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
ARFGEF3Q5TH69 TADA2B-201ENST00000310074 4350 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
ARFGEF3Q5TH69 DRAP1-201ENST00000312515 989 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
ARFGEF3Q5TH69 Z98883.1-202ENST00000635107 1289 ntTSL 5 BASIC19.76■□□□□ 0.75
ARFGEF3Q5TH69 GTPBP3-202ENST00000358792 1951 ntAPPRIS P4 TSL 2 BASIC19.75■□□□□ 0.75
ARFGEF3Q5TH69 YWHAH-202ENST00000397492 1879 ntTSL 3 BASIC19.75■□□□□ 0.75
ARFGEF3Q5TH69 WFDC1-201ENST00000219454 1534 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
ARFGEF3Q5TH69 TANGO2-204ENST00000401833 1920 ntTSL 5 BASIC19.75■□□□□ 0.75
ARFGEF3Q5TH69 CLTB-201ENST00000310418 1215 ntAPPRIS P4 TSL 1 (best) BASIC19.75■□□□□ 0.75
ARFGEF3Q5TH69 CLTB-202ENST00000345807 1161 ntAPPRIS ALT1 TSL 1 (best) BASIC19.75■□□□□ 0.75
ARFGEF3Q5TH69 AL445237.1-202ENST00000604581 425 ntTSL 5 BASIC19.75■□□□□ 0.75
ARFGEF3Q5TH69 AL117336.3-202ENST00000605499 489 ntTSL 3 BASIC19.75■□□□□ 0.75
ARFGEF3Q5TH69 RARA-AS1-201ENST00000581080 1790 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
ARFGEF3Q5TH69 SERINC5-203ENST00000509193 1441 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
ARFGEF3Q5TH69 RRP9-201ENST00000232888 1578 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
ARFGEF3Q5TH69 ST3GAL5-231ENST00000639119 2131 ntTSL 5 BASIC19.75■□□□□ 0.75
ARFGEF3Q5TH69 SLC25A39-203ENST00000537904 1274 ntTSL 2 BASIC19.74■□□□□ 0.75
ARFGEF3Q5TH69 NR2F1-AS1-214ENST00000607831 1963 ntTSL 2 BASIC19.74■□□□□ 0.75
ARFGEF3Q5TH69 SDSL-202ENST00000403593 1449 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
ARFGEF3Q5TH69 DLK2-202ENST00000372485 1572 ntAPPRIS ALT1 TSL 5 BASIC19.74■□□□□ 0.75
ARFGEF3Q5TH69 RABEP2-203ENST00000544477 1645 ntTSL 2 BASIC19.74■□□□□ 0.75
ARFGEF3Q5TH69 CD72-202ENST00000378430 585 ntTSL 3 BASIC19.74■□□□□ 0.75
ARFGEF3Q5TH69 EIF3J-203ENST00000535391 925 ntTSL 2 BASIC19.74■□□□□ 0.75
ARFGEF3Q5TH69 CA9-204ENST00000617161 1374 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
ARFGEF3Q5TH69 PGR-AS1-202ENST00000632820 1545 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
ARFGEF3Q5TH69 PPM1B-202ENST00000345249 1713 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
ARFGEF3Q5TH69 GPS1-204ENST00000392358 2276 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
ARFGEF3Q5TH69 DEDD-212ENST00000545495 2329 ntAPPRIS P1 TSL 3 BASIC19.73■□□□□ 0.75
ARFGEF3Q5TH69 ZNF598-202ENST00000562103 2717 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
ARFGEF3Q5TH69 ZNRF1-205ENST00000566250 1069 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
ARFGEF3Q5TH69 ZNRF1-206ENST00000567962 1234 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
ARFGEF3Q5TH69 IKBKG-211ENST00000615874 1460 ntTSL 5 BASIC19.73■□□□□ 0.75
ARFGEF3Q5TH69 IKBKG-215ENST00000619941 1463 ntTSL 5 BASIC19.73■□□□□ 0.75
ARFGEF3Q5TH69 CPNE1-202ENST00000352393 2147 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
ARFGEF3Q5TH69 CRLF1-201ENST00000392386 1792 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
ARFGEF3Q5TH69 PRICKLE4-201ENST00000394259 939 ntAPPRIS ALT2 TSL 5 BASIC19.73■□□□□ 0.75
ARFGEF3Q5TH69 RASSF1-AS1-201ENST00000629828 790 ntBASIC19.73■□□□□ 0.75
ARFGEF3Q5TH69 ADGRB2-204ENST00000398542 5176 ntTSL 5 BASIC19.72■□□□□ 0.75
ARFGEF3Q5TH69 PNCK-215ENST00000447676 1585 ntTSL 2 BASIC19.72■□□□□ 0.75
ARFGEF3Q5TH69 CIC-201ENST00000160740 6111 ntAPPRIS ALT1 TSL 5 BASIC19.72■□□□□ 0.75
ARFGEF3Q5TH69 MEIS2-204ENST00000397620 2295 ntTSL 2 BASIC19.72■□□□□ 0.75
ARFGEF3Q5TH69 CFAP99-207ENST00000635017 2298 ntTSL 5 BASIC19.72■□□□□ 0.75
ARFGEF3Q5TH69 PEMT-206ENST00000435340 960 ntTSL 5 BASIC19.72■□□□□ 0.75
ARFGEF3Q5TH69 ST6GALNAC6-204ENST00000373144 2406 ntAPPRIS ALT1 TSL 1 (best) BASIC19.72■□□□□ 0.75
ARFGEF3Q5TH69 SEPT2-205ENST00000401990 1734 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
ARFGEF3Q5TH69 ATG16L2-205ENST00000534905 1614 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
ARFGEF3Q5TH69 SUSD3-202ENST00000375472 1195 ntAPPRIS P3 TSL 1 (best) BASIC19.71■□□□□ 0.75
ARFGEF3Q5TH69 HM13-AS1-201ENST00000412178 489 ntTSL 3 BASIC19.71■□□□□ 0.75
ARFGEF3Q5TH69 FBXW5-201ENST00000325285 2274 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
ARFGEF3Q5TH69 CNN3-202ENST00000394202 1974 ntTSL 2 BASIC19.71■□□□□ 0.75
ARFGEF3Q5TH69 AL136116.3-201ENST00000402907 1138 ntBASIC19.71■□□□□ 0.75
ARFGEF3Q5TH69 IGFBP3-201ENST00000275521 2262 ntAPPRIS P3 TSL 1 (best) BASIC19.71■□□□□ 0.75
ARFGEF3Q5TH69 DPY19L1-209ENST00000638088 5075 ntAPPRIS ALT2 TSL 5 BASIC19.71■□□□□ 0.75
ARFGEF3Q5TH69 C6orf89-201ENST00000355190 1309 ntAPPRIS P3 TSL 1 (best) BASIC19.7■□□□□ 0.74
ARFGEF3Q5TH69 EMC9-201ENST00000216799 835 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
ARFGEF3Q5TH69 AC079305.3-201ENST00000455416 218 ntTSL 5 BASIC19.7■□□□□ 0.74
ARFGEF3Q5TH69 AC005551.1-201ENST00000641816 493 ntAPPRIS P1 BASIC19.7■□□□□ 0.74
Retrieved 100 of 98,524 protein–RNA pairs in 15.4 ms