Protein–RNA interactions for Protein: Q5SXM2

SNAPC4, snRNA-activating protein complex subunit 4, humanhuman

Predictions only

Length 1,469 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNAPC4Q5SXM2 PRELID1-203ENST00000503216 1171 ntTSL 1 (best) BASIC38.73■■■■□ 3.79
SNAPC4Q5SXM2 AC011298.3-201ENST00000615796 283 ntBASIC38.73■■■■□ 3.79
SNAPC4Q5SXM2 FPGS-202ENST00000373228 1383 ntTSL 5 BASIC38.73■■■■□ 3.79
SNAPC4Q5SXM2 ARPC5L-201ENST00000259477 1325 ntAPPRIS P1 TSL 1 (best) BASIC38.73■■■■□ 3.79
SNAPC4Q5SXM2 ARHGAP22-202ENST00000374170 2107 ntTSL 5 BASIC38.73■■■■□ 3.79
SNAPC4Q5SXM2 BCL2L12-201ENST00000246784 990 ntAPPRIS ALT2 TSL 1 (best) BASIC38.73■■■■□ 3.79
SNAPC4Q5SXM2 DENND3-207ENST00000518347 850 ntTSL 2 BASIC38.73■■■■□ 3.79
SNAPC4Q5SXM2 TCEA1-211ENST00000522635 1432 ntTSL 2 BASIC38.72■■■■□ 3.79
SNAPC4Q5SXM2 CDC37L1-202ENST00000381858 1244 ntTSL 5 BASIC38.72■■■■□ 3.79
SNAPC4Q5SXM2 NEBL-AS1-202ENST00000439097 661 ntTSL 2 BASIC38.72■■■■□ 3.79
SNAPC4Q5SXM2 STEAP2-207ENST00000402625 1372 ntTSL 5 BASIC38.71■■■■□ 3.79
SNAPC4Q5SXM2 LKAAEAR1-201ENST00000302096 761 ntAPPRIS ALT2 TSL 2 BASIC38.71■■■■□ 3.79
SNAPC4Q5SXM2 LKAAEAR1-202ENST00000308906 868 ntAPPRIS P2 TSL 1 (best) BASIC38.71■■■■□ 3.79
SNAPC4Q5SXM2 CTNNAL1-202ENST00000374593 761 ntTSL 3 BASIC38.71■■■■□ 3.79
SNAPC4Q5SXM2 ZNF302-209ENST00000507959 854 ntTSL 2 BASIC38.71■■■■□ 3.79
SNAPC4Q5SXM2 GLRX3-201ENST00000331244 1302 ntAPPRIS P1 TSL 1 (best) BASIC38.7■■■■□ 3.79
SNAPC4Q5SXM2 FEZF2-202ENST00000475839 1918 ntAPPRIS P1 TSL 1 (best) BASIC38.7■■■■□ 3.79
SNAPC4Q5SXM2 NGEF-203ENST00000409079 1022 ntTSL 1 (best) BASIC38.7■■■■□ 3.79
SNAPC4Q5SXM2 AC022517.1-201ENST00000592429 346 ntBASIC38.7■■■■□ 3.79
SNAPC4Q5SXM2 AL031602.1-201ENST00000633169 911 ntBASIC38.7■■■■□ 3.79
SNAPC4Q5SXM2 AL122058.1-201ENST00000412321 1166 ntTSL 1 (best) BASIC38.69■■■■□ 3.78
SNAPC4Q5SXM2 SDHAP1-204ENST00000427415 559 ntTSL 4 BASIC38.69■■■■□ 3.78
SNAPC4Q5SXM2 TNFSF12-TNFSF13-201ENST00000293826 1816 ntAPPRIS P1 TSL 1 (best) BASIC38.69■■■■□ 3.78
SNAPC4Q5SXM2 HSPBP1-201ENST00000255631 1768 ntAPPRIS P1 TSL 1 (best) BASIC38.68■■■■□ 3.78
SNAPC4Q5SXM2 B3GALT4-204ENST00000451237 1694 ntAPPRIS P1 BASIC38.68■■■■□ 3.78
SNAPC4Q5SXM2 AC008764.7-201ENST00000593779 1081 ntBASIC38.68■■■■□ 3.78
SNAPC4Q5SXM2 AL137784.2-201ENST00000607332 1000 ntBASIC38.68■■■■□ 3.78
SNAPC4Q5SXM2 MEIS3-204ENST00000558555 1715 ntAPPRIS ALT2 TSL 5 BASIC38.68■■■■□ 3.78
SNAPC4Q5SXM2 FNDC4-201ENST00000264703 1657 ntAPPRIS P1 TSL 1 (best) BASIC38.68■■■■□ 3.78
SNAPC4Q5SXM2 SPEF1-201ENST00000379756 1580 ntAPPRIS P1 TSL 1 (best) BASIC38.67■■■■□ 3.78
SNAPC4Q5SXM2 CTAG2-202ENST00000369585 748 ntAPPRIS P1 TSL 1 (best) BASIC38.66■■■■□ 3.78
SNAPC4Q5SXM2 AC092171.4-201ENST00000609130 632 ntBASIC38.66■■■■□ 3.78
SNAPC4Q5SXM2 NRM-201ENST00000259953 1755 ntAPPRIS P2 TSL 2 BASIC38.66■■■■□ 3.78
SNAPC4Q5SXM2 SLIT1-203ENST00000371041 1695 ntTSL 2 BASIC38.66■■■■□ 3.78
SNAPC4Q5SXM2 AC034268.1-201ENST00000441047 882 ntBASIC38.66■■■■□ 3.78
SNAPC4Q5SXM2 AC080013.1-202ENST00000465477 674 ntTSL 5 BASIC38.66■■■■□ 3.78
SNAPC4Q5SXM2 AL583722.4-201ENST00000555524 716 ntTSL 3 BASIC38.66■■■■□ 3.78
SNAPC4Q5SXM2 C16orf87-201ENST00000285697 1585 ntAPPRIS P1 TSL 1 (best) BASIC38.65■■■■□ 3.78
SNAPC4Q5SXM2 MFSD12-201ENST00000355415 2124 ntAPPRIS P3 TSL 1 (best) BASIC38.65■■■■□ 3.78
SNAPC4Q5SXM2 RTN2-201ENST00000245923 2293 ntTSL 1 (best) BASIC38.65■■■■□ 3.78
SNAPC4Q5SXM2 AC068580.1-201ENST00000446489 252 ntTSL 3 BASIC38.65■■■■□ 3.78
SNAPC4Q5SXM2 SIRT3-215ENST00000532956 1235 ntTSL 2 BASIC38.65■■■■□ 3.78
SNAPC4Q5SXM2 AL138963.3-201ENST00000610057 588 ntTSL 4 BASIC38.65■■■■□ 3.78
SNAPC4Q5SXM2 AC112229.4-201ENST00000488671 1528 ntTSL 2 BASIC38.64■■■■□ 3.78
SNAPC4Q5SXM2 REXO4-201ENST00000371935 1899 ntTSL 3 BASIC38.64■■■■□ 3.78
SNAPC4Q5SXM2 LRRC10B-201ENST00000378075 2219 ntAPPRIS P1 BASIC38.64■■■■□ 3.78
SNAPC4Q5SXM2 HRH3-203ENST00000611492 900 ntTSL 1 (best) BASIC38.64■■■■□ 3.78
SNAPC4Q5SXM2 IKBKG-211ENST00000615874 1460 ntTSL 5 BASIC38.64■■■■□ 3.78
SNAPC4Q5SXM2 IKBKG-215ENST00000619941 1463 ntTSL 5 BASIC38.64■■■■□ 3.78
SNAPC4Q5SXM2 CYB561D2-205ENST00000425346 1319 ntAPPRIS P1 TSL 1 (best) BASIC38.64■■■■□ 3.78
SNAPC4Q5SXM2 TRAF4-217ENST00000618771 543 ntTSL 5 BASIC38.63■■■■□ 3.77
SNAPC4Q5SXM2 SAP25-203ENST00000614631 987 ntAPPRIS P2 TSL 2 BASIC38.62■■■■□ 3.77
SNAPC4Q5SXM2 SPI1-201ENST00000227163 1168 ntAPPRIS ALT1 TSL 2 BASIC38.61■■■■□ 3.77
SNAPC4Q5SXM2 AC108002.2-201ENST00000519782 340 ntTSL 4 BASIC38.61■■■■□ 3.77
SNAPC4Q5SXM2 CBWD3-212ENST00000616550 721 ntTSL 2 BASIC38.61■■■■□ 3.77
SNAPC4Q5SXM2 CBWD6-216ENST00000617933 721 ntTSL 3 BASIC38.61■■■■□ 3.77
SNAPC4Q5SXM2 EVC-203ENST00000509451 1960 ntTSL 1 (best) BASIC38.6■■■■□ 3.77
SNAPC4Q5SXM2 RTCA-202ENST00000370126 538 ntTSL 1 (best) BASIC38.6■■■■□ 3.77
SNAPC4Q5SXM2 AC005410.1-201ENST00000579522 462 ntTSL 3 BASIC38.6■■■■□ 3.77
SNAPC4Q5SXM2 AL138724.1-201ENST00000606771 1088 ntBASIC38.6■■■■□ 3.77
SNAPC4Q5SXM2 AC012313.1-204ENST00000444227 462 ntTSL 1 (best) BASIC38.6■■■■□ 3.77
SNAPC4Q5SXM2 MED14OS-201ENST00000456333 900 ntAPPRIS P1 TSL 1 (best) BASIC38.6■■■■□ 3.77
SNAPC4Q5SXM2 SLC39A3-203ENST00000545664 1219 ntTSL 2 BASIC38.6■■■■□ 3.77
SNAPC4Q5SXM2 AC005703.6-201ENST00000623265 1329 ntBASIC38.59■■■■□ 3.77
SNAPC4Q5SXM2 NKX6-3-201ENST00000518699 1352 ntAPPRIS P1 TSL 5 BASIC38.59■■■■□ 3.77
SNAPC4Q5SXM2 TTC3-225ENST00000540756 2025 ntTSL 2 BASIC38.59■■■■□ 3.77
SNAPC4Q5SXM2 CREB3L3-205ENST00000602257 1475 ntAPPRIS ALT2 TSL 1 (best) BASIC38.59■■■■□ 3.77
SNAPC4Q5SXM2 CCR10-201ENST00000332438 1773 ntAPPRIS P1 TSL 1 (best) BASIC38.59■■■■□ 3.77
SNAPC4Q5SXM2 CD47-202ENST00000361309 1285 ntTSL 1 (best) BASIC38.59■■■■□ 3.77
SNAPC4Q5SXM2 SLC35A3-216ENST00000639221 1032 ntTSL 5 BASIC38.59■■■■□ 3.77
SNAPC4Q5SXM2 SECTM1-201ENST00000269389 2235 ntAPPRIS P2 TSL 1 (best) BASIC38.59■■■■□ 3.77
SNAPC4Q5SXM2 C1orf35-201ENST00000272139 1427 ntAPPRIS P1 TSL 1 (best) BASIC38.59■■■■□ 3.77
SNAPC4Q5SXM2 SH3BP2-221ENST00000511747 2351 ntAPPRIS P3 TSL 1 (best) BASIC38.58■■■■□ 3.77
SNAPC4Q5SXM2 C1QTNF5-203ENST00000530681 1046 ntAPPRIS P1 TSL 1 (best) BASIC38.58■■■■□ 3.77
SNAPC4Q5SXM2 NAA30-202ENST00000554703 795 ntTSL 1 (best) BASIC38.58■■■■□ 3.77
SNAPC4Q5SXM2 AC099791.2-201ENST00000605725 427 ntBASIC38.58■■■■□ 3.77
SNAPC4Q5SXM2 SLC35A2-212ENST00000634665 486 ntTSL 4 BASIC38.58■■■■□ 3.77
SNAPC4Q5SXM2 GUK1-207ENST00000366726 873 ntAPPRIS P3 TSL 3 BASIC38.57■■■■□ 3.76
SNAPC4Q5SXM2 CREB3L2-203ENST00000452463 1105 ntTSL 1 (best) BASIC38.57■■■■□ 3.76
SNAPC4Q5SXM2 SUZ12P1-202ENST00000578070 929 ntTSL 5 BASIC38.57■■■■□ 3.76
SNAPC4Q5SXM2 AL133516.1-201ENST00000633012 540 ntTSL 5 BASIC38.57■■■■□ 3.76
SNAPC4Q5SXM2 HES6-201ENST00000272937 1454 ntAPPRIS P3 TSL 1 (best) BASIC38.56■■■■□ 3.76
SNAPC4Q5SXM2 C15orf61-202ENST00000557807 769 ntTSL 2 BASIC38.56■■■■□ 3.76
SNAPC4Q5SXM2 PDCD5-204ENST00000586035 601 ntTSL 3 BASIC38.56■■■■□ 3.76
SNAPC4Q5SXM2 AES-207ENST00000586839 942 ntTSL 1 (best) BASIC38.56■■■■□ 3.76
SNAPC4Q5SXM2 NEDD4L-225ENST00000589054 1033 ntTSL 3 BASIC38.56■■■■□ 3.76
SNAPC4Q5SXM2 PFKFB4-202ENST00000383734 1491 ntTSL 1 (best) BASIC38.56■■■■□ 3.76
SNAPC4Q5SXM2 EPDR1-202ENST00000423717 638 ntTSL 1 (best) BASIC38.55■■■■□ 3.76
SNAPC4Q5SXM2 SLC47A1P1-202ENST00000449666 945 ntBASIC38.55■■■■□ 3.76
SNAPC4Q5SXM2 AC004707.1-201ENST00000511627 715 ntTSL 3 BASIC38.55■■■■□ 3.76
SNAPC4Q5SXM2 R3HCC1-201ENST00000265806 1773 ntAPPRIS ALT2 TSL 1 (best) BASIC38.55■■■■□ 3.76
SNAPC4Q5SXM2 AK1-201ENST00000223836 736 ntTSL 3 BASIC38.54■■■■□ 3.76
SNAPC4Q5SXM2 ID1-201ENST00000376105 1233 ntBASIC38.54■■■■□ 3.76
SNAPC4Q5SXM2 TMEM147-203ENST00000392205 767 ntTSL 2 BASIC38.54■■■■□ 3.76
SNAPC4Q5SXM2 TMEM70-203ENST00000517439 617 ntTSL 2 BASIC38.54■■■■□ 3.76
SNAPC4Q5SXM2 PAIP1-208ENST00000514514 1603 ntTSL 5 BASIC38.54■■■■□ 3.76
SNAPC4Q5SXM2 DPF1-202ENST00000412732 2303 ntTSL 1 (best) BASIC38.54■■■■□ 3.76
SNAPC4Q5SXM2 FSD1-204ENST00000597590 1634 ntTSL 5 BASIC38.54■■■■□ 3.76
SNAPC4Q5SXM2 AC104986.2-201ENST00000521696 380 ntTSL 2 BASIC38.53■■■■□ 3.76
SNAPC4Q5SXM2 DUX4L2-201ENST00000561772 1275 ntBASIC38.53■■■■□ 3.76
Retrieved 100 of 98,524 protein–RNA pairs in 23.7 ms