Protein–RNA interactions for Protein: Q15768

EFNB3, Ephrin-B3, humanhuman

Predictions only

Length 340 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
EFNB3Q15768 LSM7-203ENST00000585409 512 ntTSL 2 BASIC19.86■□□□□ 0.77
EFNB3Q15768 MIR6089-201ENST00000616698 64 ntBASIC19.86■□□□□ 0.77
EFNB3Q15768 NKAIN3-202ENST00000523211 1988 ntAPPRIS P1 TSL 2 BASIC19.86■□□□□ 0.77
EFNB3Q15768 MATK-204ENST00000585778 1994 ntAPPRIS ALT2 TSL 1 (best) BASIC19.86■□□□□ 0.77
EFNB3Q15768 DLK2-202ENST00000372485 1572 ntAPPRIS ALT1 TSL 5 BASIC19.86■□□□□ 0.77
EFNB3Q15768 HNRNPAB-208ENST00000515193 1595 ntAPPRIS ALT2 TSL 5 BASIC19.86■□□□□ 0.77
EFNB3Q15768 TSPAN13-201ENST00000262067 2093 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
EFNB3Q15768 RPUSD1-201ENST00000007264 2050 ntAPPRIS P1 TSL 2 BASIC19.85■□□□□ 0.77
EFNB3Q15768 SNTA1-201ENST00000217381 2342 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
EFNB3Q15768 SUSD3-202ENST00000375472 1195 ntAPPRIS P3 TSL 1 (best) BASIC19.85■□□□□ 0.77
EFNB3Q15768 ARPC4-208ENST00000498623 942 ntTSL 2 BASIC19.85■□□□□ 0.77
EFNB3Q15768 ZNF419-210ENST00000520540 568 ntTSL 4 BASIC19.85■□□□□ 0.77
EFNB3Q15768 PLEKHJ1-213ENST00000591099 1092 ntTSL 2 BASIC19.85■□□□□ 0.77
EFNB3Q15768 DUSP22-214ENST00000605315 867 ntTSL 5 BASIC19.85■□□□□ 0.77
EFNB3Q15768 SNX5-217ENST00000606557 1087 ntBASIC19.85■□□□□ 0.77
EFNB3Q15768 EBF4-210ENST00000609451 2012 ntAPPRIS ALT1 TSL 5 BASIC19.85■□□□□ 0.77
EFNB3Q15768 CAPN10-204ENST00000354082 1999 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
EFNB3Q15768 HAS2-AS1-201ENST00000514180 1656 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
EFNB3Q15768 CEBPA-AS1-201ENST00000592982 2198 ntBASIC19.84■□□□□ 0.77
EFNB3Q15768 LSM4-201ENST00000252816 986 ntTSL 2 BASIC19.84■□□□□ 0.77
EFNB3Q15768 TRIM7-202ENST00000334421 1228 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
EFNB3Q15768 TMEM165-204ENST00000506198 828 ntTSL 2 BASIC19.84■□□□□ 0.77
EFNB3Q15768 MIR6722-201ENST00000617286 78 ntBASIC19.84■□□□□ 0.77
EFNB3Q15768 AC119427.1-201ENST00000633182 556 ntTSL 4 BASIC19.84■□□□□ 0.77
EFNB3Q15768 RARA-AS1-201ENST00000581080 1790 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
EFNB3Q15768 ST6GALNAC6-204ENST00000373144 2406 ntAPPRIS ALT1 TSL 1 (best) BASIC19.84■□□□□ 0.77
EFNB3Q15768 SERINC5-203ENST00000509193 1441 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
EFNB3Q15768 MYPOP-201ENST00000322217 1890 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
EFNB3Q15768 SEPT2-205ENST00000401990 1734 ntTSL 1 (best) BASIC19.83■□□□□ 0.77
EFNB3Q15768 CDKN2A-207ENST00000497750 565 ntTSL 4 BASIC19.83■□□□□ 0.77
EFNB3Q15768 CDKN2A-212ENST00000578845 678 ntTSL 2 BASIC19.83■□□□□ 0.77
EFNB3Q15768 TMEM240-203ENST00000624426 796 ntTSL 3 BASIC19.83■□□□□ 0.77
EFNB3Q15768 RGS19-201ENST00000332298 1510 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
EFNB3Q15768 PEMT-201ENST00000255389 1013 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
EFNB3Q15768 SLC16A10-206ENST00000612036 1231 ntTSL 5 BASIC19.82■□□□□ 0.76
EFNB3Q15768 CSNK1E-203ENST00000396832 2791 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
EFNB3Q15768 POU2F2-208ENST00000529952 1716 ntAPPRIS ALT2 TSL 1 (best) BASIC19.82■□□□□ 0.76
EFNB3Q15768 MORF4L1-202ENST00000379535 2274 ntTSL 2 BASIC19.81■□□□□ 0.76
EFNB3Q15768 C14orf80-204ENST00000392522 1630 ntAPPRIS P4 TSL 5 BASIC19.81■□□□□ 0.76
EFNB3Q15768 CDKN2B-202ENST00000380142 859 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
EFNB3Q15768 MIR3621-201ENST00000580529 85 ntBASIC19.81■□□□□ 0.76
EFNB3Q15768 MIR663AHG-233ENST00000609248 830 ntTSL 5 BASIC19.81■□□□□ 0.76
EFNB3Q15768 AL117332.1-201ENST00000622628 974 ntBASIC19.81■□□□□ 0.76
EFNB3Q15768 ESRRA-203ENST00000406310 2218 ntAPPRIS ALT1 TSL 1 (best) BASIC19.81■□□□□ 0.76
EFNB3Q15768 SNCB-201ENST00000310112 1383 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
EFNB3Q15768 AC008406.3-201ENST00000620001 1374 ntBASIC19.81■□□□□ 0.76
EFNB3Q15768 CAPZB-203ENST00000375142 1686 ntAPPRIS ALT1 TSL 5 BASIC19.81■□□□□ 0.76
EFNB3Q15768 HOMER3-205ENST00000542541 1607 ntAPPRIS P3 TSL 1 (best) BASIC19.8■□□□□ 0.76
EFNB3Q15768 YWHAH-202ENST00000397492 1879 ntTSL 3 BASIC19.8■□□□□ 0.76
EFNB3Q15768 CD63-202ENST00000420846 981 ntAPPRIS P1 TSL 5 BASIC19.8■□□□□ 0.76
EFNB3Q15768 PRSS21-201ENST00000005995 1101 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
EFNB3Q15768 ZFPM1-201ENST00000319555 5380 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
EFNB3Q15768 ST3GAL5-214ENST00000638178 2034 ntTSL 5 BASIC19.8■□□□□ 0.76
EFNB3Q15768 C7orf25-205ENST00000438029 1743 ntAPPRIS P1 TSL 2 BASIC19.79■□□□□ 0.76
EFNB3Q15768 SPG21-201ENST00000204566 1822 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
EFNB3Q15768 C7orf25-206ENST00000447342 1823 ntTSL 2 BASIC19.79■□□□□ 0.76
EFNB3Q15768 AC012123.1-201ENST00000426194 1661 ntTSL 5 BASIC19.79■□□□□ 0.76
EFNB3Q15768 CD72-202ENST00000378430 585 ntTSL 3 BASIC19.79■□□□□ 0.76
EFNB3Q15768 ERRFI1-203ENST00000469499 995 ntTSL 3 BASIC19.79■□□□□ 0.76
EFNB3Q15768 TMEM170A-206ENST00000569276 609 ntTSL 2 BASIC19.79■□□□□ 0.76
EFNB3Q15768 AL356740.2-201ENST00000601559 647 ntBASIC19.79■□□□□ 0.76
EFNB3Q15768 LINC01881-206ENST00000614114 957 ntTSL 2 BASIC19.79■□□□□ 0.76
EFNB3Q15768 MFSD5-201ENST00000329548 1760 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
EFNB3Q15768 CKB-201ENST00000348956 1709 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
EFNB3Q15768 IKBKG-211ENST00000615874 1460 ntTSL 5 BASIC19.79■□□□□ 0.76
EFNB3Q15768 IKBKG-215ENST00000619941 1463 ntTSL 5 BASIC19.79■□□□□ 0.76
EFNB3Q15768 VDAC2-203ENST00000332211 1557 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
EFNB3Q15768 C7orf49-203ENST00000430372 1579 ntTSL 5 BASIC19.78■□□□□ 0.76
EFNB3Q15768 P2RY2-202ENST00000393596 2174 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
EFNB3Q15768 CCM2L-201ENST00000262659 2523 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
EFNB3Q15768 CTBP2-211ENST00000494626 2014 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
EFNB3Q15768 CRLF1-201ENST00000392386 1792 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
EFNB3Q15768 RFWD2-201ENST00000308769 2124 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
EFNB3Q15768 PCMT1-202ENST00000367380 1628 ntTSL 2 BASIC19.78■□□□□ 0.76
EFNB3Q15768 PCMT1-211ENST00000544496 1628 ntTSL 2 BASIC19.78■□□□□ 0.76
EFNB3Q15768 RAB33A-201ENST00000257017 1258 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
EFNB3Q15768 RPP21-222ENST00000433076 577 ntTSL 2 BASIC19.78■□□□□ 0.76
EFNB3Q15768 AC004540.2-202ENST00000451264 508 ntTSL 2 BASIC19.78■□□□□ 0.76
EFNB3Q15768 AC004448.1-201ENST00000458332 883 ntBASIC19.78■□□□□ 0.76
EFNB3Q15768 PFKFB4-204ENST00000416568 1575 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
EFNB3Q15768 CCND3-202ENST00000372988 2133 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
EFNB3Q15768 NELFB-201ENST00000343053 2698 ntAPPRIS ALT2 TSL 1 (best) BASIC19.78■□□□□ 0.76
EFNB3Q15768 RING1-201ENST00000374656 1752 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
EFNB3Q15768 PCYT2-202ENST00000538721 1765 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
EFNB3Q15768 ATG16L2-205ENST00000534905 1614 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
EFNB3Q15768 IQANK1-201ENST00000527139 1803 ntAPPRIS P1 TSL 5 BASIC19.77■□□□□ 0.76
EFNB3Q15768 WIPI2-202ENST00000382384 1948 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
EFNB3Q15768 FBXO45-201ENST00000311630 5899 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
EFNB3Q15768 TFPT-201ENST00000391757 774 ntTSL 5 BASIC19.77■□□□□ 0.76
EFNB3Q15768 TFPT-202ENST00000391758 804 ntAPPRIS ALT2 TSL 1 (best) BASIC19.77■□□□□ 0.76
EFNB3Q15768 SRR-208ENST00000576848 588 ntTSL 4 BASIC19.77■□□□□ 0.76
EFNB3Q15768 COMMD5-201ENST00000305103 1373 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
EFNB3Q15768 FOXA3-201ENST00000302177 1989 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.75
EFNB3Q15768 C11orf91-201ENST00000379011 811 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
EFNB3Q15768 ACSS1-203ENST00000432802 2438 ntTSL 2 BASIC19.76■□□□□ 0.75
EFNB3Q15768 TSPOAP1-AS1-205ENST00000580022 2337 ntTSL 2 BASIC19.76■□□□□ 0.75
EFNB3Q15768 SLC15A3-201ENST00000227880 2115 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
EFNB3Q15768 RFNG-201ENST00000310496 1828 ntAPPRIS P1 TSL 2 BASIC19.76■□□□□ 0.75
EFNB3Q15768 OSBP-201ENST00000263847 5083 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
EFNB3Q15768 MBOAT7-201ENST00000245615 2529 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Retrieved 100 of 98,524 protein–RNA pairs in 34.6 ms