Protein–RNA interactions for Protein: P78345

RPP38, Ribonuclease P protein subunit p38, humanhuman

Known RBP Predictions only

Length 283 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPP38P78345 MTERF3-201ENST00000287025 1409 ntAPPRIS P1 TSL 1 (best) BASIC21.86■■□□□ 1.09
RPP38P78345 BIN1-207ENST00000357970 2497 ntTSL 1 (best) BASIC21.86■■□□□ 1.09
RPP38P78345 DVL3-201ENST00000313143 5254 ntAPPRIS P1 TSL 1 (best) BASIC21.86■■□□□ 1.09
RPP38P78345 GP1BB-201ENST00000366425 1553 ntAPPRIS P1 TSL 1 (best) BASIC21.86■■□□□ 1.09
RPP38P78345 IRF2BP1-201ENST00000302165 2564 ntAPPRIS P1 BASIC21.86■■□□□ 1.09
RPP38P78345 LSR-204ENST00000361790 2210 ntAPPRIS P4 TSL 1 (best) BASIC21.86■■□□□ 1.09
RPP38P78345 AC097639.1-201ENST00000565519 1891 ntBASIC21.86■■□□□ 1.09
RPP38P78345 EGFL8-220ENST00000395512 1312 ntAPPRIS P1 TSL 1 (best) BASIC21.85■■□□□ 1.09
RPP38P78345 PAOX-206ENST00000480071 1324 ntTSL 1 (best) BASIC21.85■■□□□ 1.09
RPP38P78345 CENPVL1-201ENST00000602548 1620 ntAPPRIS P1 BASIC21.85■■□□□ 1.09
RPP38P78345 CENPVL2-201ENST00000634648 1620 ntAPPRIS P1 BASIC21.85■■□□□ 1.09
RPP38P78345 DTNB-211ENST00000407661 2420 ntAPPRIS ALT1 TSL 1 (best) BASIC21.85■■□□□ 1.09
RPP38P78345 SYNGR3-201ENST00000248121 2051 ntAPPRIS P1 TSL 1 (best) BASIC21.85■■□□□ 1.09
RPP38P78345 TRAP1-202ENST00000538171 2052 ntTSL 2 BASIC21.85■■□□□ 1.09
RPP38P78345 YBX1P4-201ENST00000392794 808 ntBASIC21.85■■□□□ 1.09
RPP38P78345 GUCD1-207ENST00000447813 895 ntTSL 3 BASIC21.85■■□□□ 1.09
RPP38P78345 CDKN2A-214ENST00000579755 1283 ntAPPRIS P1 TSL 1 (best) BASIC21.85■■□□□ 1.09
RPP38P78345 SIAH2-201ENST00000312960 2517 ntAPPRIS P1 TSL 1 (best) BASIC21.85■■□□□ 1.09
RPP38P78345 ZFYVE28-202ENST00000503000 1874 ntTSL 1 (best) BASIC21.85■■□□□ 1.09
RPP38P78345 DPF1-206ENST00000420980 2227 ntTSL 1 (best) BASIC21.84■■□□□ 1.09
RPP38P78345 ZDHHC1-201ENST00000348579 2047 ntAPPRIS P2 TSL 1 (best) BASIC21.84■■□□□ 1.09
RPP38P78345 PTOV1-201ENST00000391842 1875 ntAPPRIS P1 TSL 5 BASIC21.84■■□□□ 1.09
RPP38P78345 EPCAM-201ENST00000263735 1724 ntAPPRIS P1 TSL 1 (best) BASIC21.84■■□□□ 1.09
RPP38P78345 E2F5-202ENST00000416274 1728 ntAPPRIS P4 TSL 1 (best) BASIC21.84■■□□□ 1.09
RPP38P78345 IDNK-201ENST00000376417 511 ntTSL 5 BASIC21.84■■□□□ 1.09
RPP38P78345 IDNK-202ENST00000376419 692 ntAPPRIS P1 TSL 1 (best) BASIC21.84■■□□□ 1.09
RPP38P78345 AC022616.5-201ENST00000518796 181 ntBASIC21.84■■□□□ 1.09
RPP38P78345 CDC14B-202ENST00000375241 5589 ntAPPRIS P2 TSL 1 (best) BASIC21.84■■□□□ 1.09
RPP38P78345 FZD8-201ENST00000374694 4030 ntAPPRIS P1 BASIC21.84■■□□□ 1.09
RPP38P78345 PLEK2-201ENST00000216446 1549 ntAPPRIS P1 TSL 1 (best) BASIC21.84■■□□□ 1.09
RPP38P78345 MTERF3-204ENST00000523821 1529 ntTSL 1 (best) BASIC21.84■■□□□ 1.09
RPP38P78345 PNCK-204ENST00000370150 1612 ntAPPRIS P1 TSL 5 BASIC21.84■■□□□ 1.09
RPP38P78345 SYT7-202ENST00000535826 1621 ntTSL 5 BASIC21.84■■□□□ 1.09
RPP38P78345 UBTD1-201ENST00000370664 1706 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.09
RPP38P78345 CCDC96-201ENST00000310085 2091 ntAPPRIS P1 BASIC21.83■■□□□ 1.09
RPP38P78345 MED22-201ENST00000343730 1437 ntAPPRIS P4 TSL 1 (best) BASIC21.83■■□□□ 1.09
RPP38P78345 TMSB15B-202ENST00000436583 2186 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.09
RPP38P78345 ACOT1-202ENST00000557556 1271 ntTSL 1 (best) BASIC21.83■■□□□ 1.09
RPP38P78345 FAHD1-204ENST00000615972 757 ntTSL 5 BASIC21.83■■□□□ 1.09
RPP38P78345 DUSP22-201ENST00000344450 1485 ntTSL 1 (best) BASIC21.83■■□□□ 1.08
RPP38P78345 ALG1L9P-201ENST00000508969 2165 ntTSL 1 (best) BASIC21.82■■□□□ 1.08
RPP38P78345 CLEC14A-201ENST00000342213 2267 ntAPPRIS P1 BASIC21.82■■□□□ 1.08
RPP38P78345 DCUN1D2-208ENST00000478244 2045 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
RPP38P78345 MAL2-204ENST00000614891 2818 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
RPP38P78345 TOP2B-204ENST00000435706 5389 ntAPPRIS P3 TSL 1 (best) BASIC21.82■■□□□ 1.08
RPP38P78345 CPNE2-202ENST00000535318 2316 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
RPP38P78345 HMX2-201ENST00000339992 1628 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
RPP38P78345 BEX3-202ENST00000372634 753 ntTSL 2 BASIC21.82■■□□□ 1.08
RPP38P78345 TMEM238-201ENST00000444469 1000 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
RPP38P78345 RAB40B-201ENST00000269347 2189 ntTSL 2 BASIC21.82■■□□□ 1.08
RPP38P78345 FAM21EP-202ENST00000456967 2177 ntTSL 2 BASIC21.82■■□□□ 1.08
RPP38P78345 LINC00543-201ENST00000567234 1845 ntBASIC21.82■■□□□ 1.08
RPP38P78345 ERF-201ENST00000222329 2698 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
RPP38P78345 AC068473.5-201ENST00000616428 2072 ntBASIC21.81■■□□□ 1.08
RPP38P78345 FAM43A-201ENST00000329759 2494 ntAPPRIS P1 BASIC21.81■■□□□ 1.08
RPP38P78345 GDI1-204ENST00000447750 2474 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
RPP38P78345 VSTM2A-202ENST00000402613 1076 ntTSL 2 BASIC21.81■■□□□ 1.08
RPP38P78345 EME2-205ENST00000568449 1234 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
RPP38P78345 AC145124.1-201ENST00000528514 1361 ntTSL 2 BASIC21.81■■□□□ 1.08
RPP38P78345 RHOF-203ENST00000537171 1485 ntTSL 1 (best) BASIC21.81■■□□□ 1.08
RPP38P78345 AQP10-201ENST00000324978 1791 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
RPP38P78345 CUEDC1-202ENST00000407144 2190 ntAPPRIS P1 TSL 5 BASIC21.81■■□□□ 1.08
RPP38P78345 TMED2-201ENST00000262225 2560 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
RPP38P78345 IQANK1-201ENST00000527139 1803 ntAPPRIS P1 TSL 5 BASIC21.8■■□□□ 1.08
RPP38P78345 MAGI2-217ENST00000629359 6704 ntTSL 5 BASIC21.8■■□□□ 1.08
RPP38P78345 ALDH16A1-203ENST00000540132 2174 ntTSL 2 BASIC21.8■■□□□ 1.08
RPP38P78345 SLC6A10P-202ENST00000431994 2058 ntBASIC21.8■■□□□ 1.08
RPP38P78345 MIR4508-201ENST00000584178 70 ntBASIC21.8■■□□□ 1.08
RPP38P78345 C1orf232-201ENST00000634842 643 ntAPPRIS P5 TSL 5 BASIC21.8■■□□□ 1.08
RPP38P78345 TMIE-201ENST00000326431 1824 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
RPP38P78345 MAGI2-208ENST00000522391 4878 ntAPPRIS ALT2 TSL 5 BASIC21.8■■□□□ 1.08
RPP38P78345 HOXD1-201ENST00000331462 1975 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
RPP38P78345 HMG20B-202ENST00000333651 1596 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
RPP38P78345 AL592295.1-201ENST00000400984 884 ntBASIC21.79■■□□□ 1.08
RPP38P78345 YPEL1-202ENST00000403503 466 ntTSL 3 BASIC21.79■■□□□ 1.08
RPP38P78345 CARMIL1-202ENST00000461945 1290 ntTSL 1 (best) BASIC21.79■■□□□ 1.08
RPP38P78345 HAGHL-205ENST00000561546 1041 ntTSL 2 BASIC21.79■■□□□ 1.08
RPP38P78345 C11orf95-202ENST00000433688 5716 ntAPPRIS P1 TSL 5 BASIC21.79■■□□□ 1.08
RPP38P78345 C18orf65-201ENST00000622985 2076 ntTSL 2 BASIC21.79■■□□□ 1.08
RPP38P78345 ARMC6-201ENST00000269932 2412 ntAPPRIS P1 TSL 5 BASIC21.79■■□□□ 1.08
RPP38P78345 TST-202ENST00000403892 1797 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
RPP38P78345 PEX5-205ENST00000420616 2477 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
RPP38P78345 TRIM28-202ENST00000341753 2709 ntTSL 1 (best) BASIC21.79■■□□□ 1.08
RPP38P78345 RABL6-204ENST00000371671 1580 ntAPPRIS ALT2 TSL 1 (best) BASIC21.78■■□□□ 1.08
RPP38P78345 LYL1-201ENST00000264824 1490 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
RPP38P78345 LYSMD2-202ENST00000454181 1228 ntTSL 1 (best) BASIC21.78■■□□□ 1.08
RPP38P78345 AP000802.1-201ENST00000500537 1934 ntTSL 1 (best) BASIC21.78■■□□□ 1.08
RPP38P78345 EHBP1L1-201ENST00000309295 5185 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
RPP38P78345 CCNJL-201ENST00000257536 1848 ntAPPRIS P1 TSL 2 BASIC21.78■■□□□ 1.08
RPP38P78345 CBARP-202ENST00000382477 2453 ntAPPRIS ALT2 TSL 5 BASIC21.78■■□□□ 1.08
RPP38P78345 AL137002.2-201ENST00000639766 2238 ntTSL 5 BASIC21.78■■□□□ 1.08
RPP38P78345 PDS5A-202ENST00000503396 2685 ntTSL 1 (best) BASIC21.77■■□□□ 1.08
RPP38P78345 ARG2-201ENST00000261783 2045 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
RPP38P78345 SLC52A2-208ENST00000527078 1790 ntAPPRIS P1 TSL 5 BASIC21.77■■□□□ 1.08
RPP38P78345 IQCJ-SCHIP1-201ENST00000412423 2067 ntAPPRIS ALT2 TSL 1 (best) BASIC21.77■■□□□ 1.08
RPP38P78345 ZNF641-205ENST00000547026 1823 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
RPP38P78345 BTBD7-205ENST00000554565 2697 ntTSL 1 (best) BASIC21.77■■□□□ 1.08
RPP38P78345 ST3GAL5-269ENST00000640992 2292 ntAPPRIS ALT2 TSL 5 BASIC21.77■■□□□ 1.08
RPP38P78345 JMJD8-201ENST00000412368 2038 ntAPPRIS P2 TSL 1 (best) BASIC21.77■■□□□ 1.07
RPP38P78345 PPP2R2C-203ENST00000382599 1807 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
Retrieved 100 of 98,524 protein–RNA pairs in 87.6 ms