Protein–RNA interactions for Protein: P62987

UBA52, Ubiquitin-60S ribosomal protein L40, humanhuman

Known RBP Predictions only

Length 128 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBA52P62987 DENND1A-201ENST00000373618 3003 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
UBA52P62987 NFKBIB-204ENST00000572515 1929 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
UBA52P62987 BIN1-201ENST00000259238 2338 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
UBA52P62987 PTGES2-202ENST00000338961 2331 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
UBA52P62987 C2CD4D-201ENST00000454109 1757 ntAPPRIS P1 TSL 2 BASIC19.8■□□□□ 0.76
UBA52P62987 FAM21EP-202ENST00000456967 2177 ntTSL 2 BASIC19.8■□□□□ 0.76
UBA52P62987 ERF-201ENST00000222329 2698 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
UBA52P62987 TMEM268-202ENST00000374049 4578 ntAPPRIS ALT1 TSL 5 BASIC19.79■□□□□ 0.76
UBA52P62987 UXS1-201ENST00000283148 2099 ntAPPRIS ALT1 TSL 2 BASIC19.79■□□□□ 0.76
UBA52P62987 NKX6-3-202ENST00000524115 1683 ntTSL 2 BASIC19.79■□□□□ 0.76
UBA52P62987 CADM4-201ENST00000222374 2178 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
UBA52P62987 PLA2G10-201ENST00000438167 1000 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
UBA52P62987 SMKR1-201ENST00000462322 1035 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
UBA52P62987 AC053527.1-201ENST00000502790 685 ntTSL 3 BASIC19.79■□□□□ 0.76
UBA52P62987 PKNOX2-AS1-201ENST00000532316 586 ntTSL 3 BASIC19.79■□□□□ 0.76
UBA52P62987 AC018755.3-202ENST00000596210 929 ntBASIC19.79■□□□□ 0.76
UBA52P62987 LINC01342-201ENST00000416774 1620 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
UBA52P62987 BFSP1-202ENST00000377873 2207 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
UBA52P62987 IGFBP7-201ENST00000295666 1427 ntAPPRIS P3 TSL 1 (best) BASIC19.78■□□□□ 0.76
UBA52P62987 NTN3-201ENST00000293973 1986 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
UBA52P62987 BEX3-202ENST00000372634 753 ntTSL 2 BASIC19.78■□□□□ 0.76
UBA52P62987 AC055876.1-201ENST00000430589 895 ntTSL 2 BASIC19.78■□□□□ 0.76
UBA52P62987 AC009299.2-201ENST00000482477 511 ntBASIC19.78■□□□□ 0.76
UBA52P62987 LINC01233-202ENST00000598832 568 ntTSL 2 BASIC19.78■□□□□ 0.76
UBA52P62987 TCEA1-213ENST00000640041 1171 ntTSL 5 BASIC19.78■□□□□ 0.76
UBA52P62987 AC145124.1-201ENST00000528514 1361 ntTSL 2 BASIC19.78■□□□□ 0.76
UBA52P62987 FKBP8-213ENST00000608443 1849 ntAPPRIS P3 TSL 1 (best) BASIC19.78■□□□□ 0.76
UBA52P62987 ABHD6-205ENST00000478253 2482 ntAPPRIS P1 TSL 2 BASIC19.78■□□□□ 0.76
UBA52P62987 LSR-202ENST00000354900 2105 ntAPPRIS ALT2 TSL 1 (best) BASIC19.78■□□□□ 0.76
UBA52P62987 BARX1-202ENST00000401724 1323 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
UBA52P62987 LSR-201ENST00000347609 1880 ntAPPRIS ALT2 TSL 1 (best) BASIC19.77■□□□□ 0.76
UBA52P62987 LSR-213ENST00000605618 1885 ntAPPRIS ALT2 TSL 1 (best) BASIC19.77■□□□□ 0.76
UBA52P62987 CHODL-201ENST00000299295 2548 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
UBA52P62987 RNF40-201ENST00000324685 5634 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
UBA52P62987 EED-207ENST00000528180 1745 ntTSL 5 BASIC19.77■□□□□ 0.76
UBA52P62987 SLC30A2-201ENST00000374276 2494 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
UBA52P62987 ZDHHC1-201ENST00000348579 2047 ntAPPRIS P2 TSL 1 (best) BASIC19.77■□□□□ 0.76
UBA52P62987 NTHL1-201ENST00000219066 1067 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
UBA52P62987 H2AFY-204ENST00000423969 924 ntTSL 2 BASIC19.77■□□□□ 0.76
UBA52P62987 LRRC45-201ENST00000306688 2701 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
UBA52P62987 HEXDC-202ENST00000337014 2285 ntTSL 1 (best) BASIC19.77■□□□□ 0.75
UBA52P62987 PHACTR2-208ENST00000440869 2569 ntAPPRIS ALT2 TSL 2 BASIC19.77■□□□□ 0.75
UBA52P62987 ARX-201ENST00000379044 2876 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.75
UBA52P62987 ZFAND2B-201ENST00000289528 1314 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
UBA52P62987 CASP9-202ENST00000348549 1621 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
UBA52P62987 ARHGAP27-207ENST00000528273 2319 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
UBA52P62987 VEGFA-209ENST00000425836 1575 ntAPPRIS ALT2 TSL 1 (best) BASIC19.76■□□□□ 0.75
UBA52P62987 PNMT-201ENST00000269582 1253 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
UBA52P62987 IGFBP3-202ENST00000381083 1050 ntAPPRIS ALT1 TSL 5 BASIC19.76■□□□□ 0.75
UBA52P62987 AL354928.1-201ENST00000438380 617 ntTSL 2 BASIC19.76■□□□□ 0.75
UBA52P62987 ARPC2-201ENST00000295685 1605 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
UBA52P62987 PARD3-202ENST00000346874 5894 ntAPPRIS ALT2 TSL 1 (best) BASIC19.76■□□□□ 0.75
UBA52P62987 PARD3-203ENST00000350537 5867 ntAPPRIS ALT2 TSL 1 (best) BASIC19.76■□□□□ 0.75
UBA52P62987 SLC25A42-201ENST00000318596 3120 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
UBA52P62987 FPGS-221ENST00000630236 2160 ntTSL 5 BASIC19.76■□□□□ 0.75
UBA52P62987 TMEM102-201ENST00000323206 1973 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
UBA52P62987 CDR2-201ENST00000268383 2702 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
UBA52P62987 STOML1-202ENST00000316911 1891 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
UBA52P62987 PEX26-202ENST00000399744 1672 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
UBA52P62987 RBM42-205ENST00000589871 1487 ntTSL 5 BASIC19.75■□□□□ 0.75
UBA52P62987 LGR4-201ENST00000379214 5206 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
UBA52P62987 PPP2R2C-203ENST00000382599 1807 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
UBA52P62987 CTAG1B-201ENST00000328435 748 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
UBA52P62987 NAXE-203ENST00000368235 1125 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
UBA52P62987 CTAG1A-202ENST00000599837 748 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
UBA52P62987 U2AF1-204ENST00000459639 1675 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
UBA52P62987 U2AF1L5-204ENST00000623375 1675 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
UBA52P62987 SUGCT-209ENST00000628514 1591 ntAPPRIS P4 TSL 1 (best) BASIC19.74■□□□□ 0.75
UBA52P62987 PBX1-202ENST00000367897 1459 ntAPPRIS ALT1 TSL 1 (best) BASIC19.74■□□□□ 0.75
UBA52P62987 TPI1-210ENST00000613953 1460 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
UBA52P62987 NKX2-3-202ENST00000622383 1986 ntTSL 5 BASIC19.74■□□□□ 0.75
UBA52P62987 C1orf122-202ENST00000373043 2229 ntAPPRIS ALT2 TSL 1 (best) BASIC19.74■□□□□ 0.75
UBA52P62987 PITX2-209ENST00000557119 1889 ntTSL 2 BASIC19.74■□□□□ 0.75
UBA52P62987 FKBP1B-202ENST00000380991 1010 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
UBA52P62987 AC103834.1-201ENST00000520383 144 ntBASIC19.74■□□□□ 0.75
UBA52P62987 TIE1-210ENST00000538015 1140 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
UBA52P62987 MYCN-201ENST00000281043 2602 ntAPPRIS P1 TSL 5 BASIC19.74■□□□□ 0.75
UBA52P62987 NRM-201ENST00000259953 1755 ntAPPRIS P2 TSL 2 BASIC19.74■□□□□ 0.75
UBA52P62987 H2AFY-217ENST00000511689 2789 ntAPPRIS P4 TSL 1 (best) BASIC19.74■□□□□ 0.75
UBA52P62987 SOHLH1-202ENST00000425225 1411 ntAPPRIS ALT2 TSL 5 BASIC19.74■□□□□ 0.75
UBA52P62987 FAM181A-204ENST00000557000 1652 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
UBA52P62987 DONSON-210ENST00000453626 2332 ntTSL 5 BASIC19.74■□□□□ 0.75
UBA52P62987 ABHD8-201ENST00000247706 2090 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
UBA52P62987 PORCN-202ENST00000355961 1848 ntAPPRIS ALT1 TSL 1 (best) BASIC19.74■□□□□ 0.75
UBA52P62987 MYCL-201ENST00000372815 1944 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
UBA52P62987 HSPE1-201ENST00000233893 950 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
UBA52P62987 PFDN2-201ENST00000368010 677 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
UBA52P62987 RIPPLY2-202ENST00000369689 664 ntAPPRIS P2 TSL 1 (best) BASIC19.73■□□□□ 0.75
UBA52P62987 RASGEF1B-211ENST00000514050 537 ntTSL 2 BASIC19.73■□□□□ 0.75
UBA52P62987 MSX2-201ENST00000239243 2241 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
UBA52P62987 IQCD-203ENST00000546692 1872 ntTSL 5 BASIC19.73■□□□□ 0.75
UBA52P62987 KCNQ5-205ENST00000370398 6345 ntAPPRIS P3 TSL 1 (best) BASIC19.73■□□□□ 0.75
UBA52P62987 HAS1-201ENST00000222115 2087 ntAPPRIS P3 TSL 1 (best) BASIC19.72■□□□□ 0.75
UBA52P62987 SLC25A29-202ENST00000392908 2242 ntTSL 2 BASIC19.72■□□□□ 0.75
UBA52P62987 AOC3-207ENST00000617500 2392 ntTSL 4 BASIC19.72■□□□□ 0.75
UBA52P62987 MOGS-202ENST00000409065 2668 ntTSL 5 BASIC19.72■□□□□ 0.75
UBA52P62987 AC096887.2-201ENST00000623443 1957 ntBASIC19.72■□□□□ 0.75
UBA52P62987 PVT1_1.1-201ENST00000615125 194 ntBASIC19.72■□□□□ 0.75
UBA52P62987 SLC35D3-201ENST00000331858 2359 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
UBA52P62987 ZFAND4-205ENST00000374371 2283 ntTSL 5 BASIC19.72■□□□□ 0.75
Retrieved 100 of 98,524 protein–RNA pairs in 104.4 ms