Protein–RNA interactions for Protein: P57729

RAB38, Ras-related protein Rab-38, humanhuman

Predictions only

Length 211 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAB38P57729 LAT-217ENST00000630764 610 ntAPPRIS ALT2 TSL 5 BASIC21.9■■□□□ 1.1
RAB38P57729 APBA3-201ENST00000316757 2075 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
RAB38P57729 C14orf80-204ENST00000392522 1630 ntAPPRIS P4 TSL 5 BASIC21.9■■□□□ 1.1
RAB38P57729 CEBPB-201ENST00000303004 1956 ntAPPRIS P1 BASIC21.9■■□□□ 1.1
RAB38P57729 CSNK1G3-207ENST00000512718 1569 ntTSL 2 BASIC21.9■■□□□ 1.1
RAB38P57729 MBOAT7-201ENST00000245615 2529 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.1
RAB38P57729 EED-207ENST00000528180 1745 ntTSL 5 BASIC21.89■■□□□ 1.1
RAB38P57729 LRP11-202ENST00000367368 1042 ntTSL 2 BASIC21.89■■□□□ 1.09
RAB38P57729 VSTM2L-201ENST00000373459 831 ntTSL 3 BASIC21.89■■□□□ 1.09
RAB38P57729 MDK-203ENST00000395566 828 ntAPPRIS P2 TSL 1 (best) BASIC21.89■■□□□ 1.09
RAB38P57729 CD63-202ENST00000420846 981 ntAPPRIS P1 TSL 5 BASIC21.89■■□□□ 1.09
RAB38P57729 BX664725.1-201ENST00000438252 379 ntBASIC21.89■■□□□ 1.09
RAB38P57729 MIR663AHG-227ENST00000608084 765 ntTSL 5 BASIC21.89■■□□□ 1.09
RAB38P57729 TSEN54-201ENST00000333213 1944 ntAPPRIS P1 TSL 1 (best) BASIC21.88■■□□□ 1.09
RAB38P57729 BDH1-207ENST00000441275 1605 ntTSL 5 BASIC21.88■■□□□ 1.09
RAB38P57729 CTDSP2-203ENST00000547701 988 ntTSL 1 (best) BASIC21.88■■□□□ 1.09
RAB38P57729 LSM7-204ENST00000587502 575 ntTSL 1 (best) BASIC21.88■■□□□ 1.09
RAB38P57729 NAGS-201ENST00000293404 2182 ntAPPRIS P1 TSL 1 (best) BASIC21.88■■□□□ 1.09
RAB38P57729 RITA1-203ENST00000552495 1898 ntTSL 2 BASIC21.88■■□□□ 1.09
RAB38P57729 NRG1-210ENST00000520407 1955 ntTSL 1 (best) BASIC21.87■■□□□ 1.09
RAB38P57729 EVA1B-201ENST00000270824 1054 ntAPPRIS P1 TSL 2 BASIC21.87■■□□□ 1.09
RAB38P57729 ZFAND5-202ENST00000343431 1073 ntAPPRIS P1 TSL 5 BASIC21.87■■□□□ 1.09
RAB38P57729 MPP5-205ENST00000556345 1163 ntTSL 2 BASIC21.87■■□□□ 1.09
RAB38P57729 Z92544.1-202ENST00000571933 1220 ntBASIC21.87■■□□□ 1.09
RAB38P57729 AL035685.1-201ENST00000636663 812 ntBASIC21.87■■□□□ 1.09
RAB38P57729 CACNG6-203ENST00000352529 1635 ntTSL 5 BASIC21.87■■□□□ 1.09
RAB38P57729 USP25-203ENST00000351097 2158 ntTSL 1 (best) BASIC21.87■■□□□ 1.09
RAB38P57729 NFKBIB-204ENST00000572515 1929 ntTSL 1 (best) BASIC21.86■■□□□ 1.09
RAB38P57729 CCDC151-202ENST00000586836 1867 ntTSL 2 BASIC21.86■■□□□ 1.09
RAB38P57729 RIMKLB-205ENST00000535829 2236 ntAPPRIS P1 TSL 2 BASIC21.86■■□□□ 1.09
RAB38P57729 LRRC1-201ENST00000370882 808 ntTSL 3 BASIC21.86■■□□□ 1.09
RAB38P57729 EBPL-205ENST00000378284 967 ntTSL 1 (best) BASIC21.86■■□□□ 1.09
RAB38P57729 ZNF428-201ENST00000300811 1412 ntAPPRIS P1 TSL 1 (best) BASIC21.86■■□□□ 1.09
RAB38P57729 DHRS11-215ENST00000618403 1598 ntAPPRIS P1 TSL 1 (best) BASIC21.86■■□□□ 1.09
RAB38P57729 PXK-201ENST00000302779 1974 ntTSL 1 (best) BASIC21.85■■□□□ 1.09
RAB38P57729 GATA4-207ENST00000532059 1459 ntAPPRIS ALT1 TSL 1 (best) BASIC21.85■■□□□ 1.09
RAB38P57729 MORF4L1-202ENST00000379535 2274 ntTSL 2 BASIC21.85■■□□□ 1.09
RAB38P57729 FUT11-201ENST00000372841 2056 ntAPPRIS P1 TSL 1 (best) BASIC21.85■■□□□ 1.09
RAB38P57729 SMUG1-203ENST00000401977 1082 ntAPPRIS P1 TSL 5 BASIC21.85■■□□□ 1.09
RAB38P57729 LBH-205ENST00000407930 756 ntTSL 2 BASIC21.85■■□□□ 1.09
RAB38P57729 AC092849.1-201ENST00000475250 303 ntTSL 4 BASIC21.85■■□□□ 1.09
RAB38P57729 CCNG2-201ENST00000316355 5526 ntAPPRIS P1 TSL 1 (best) BASIC21.85■■□□□ 1.09
RAB38P57729 BTBD6-201ENST00000327471 1948 ntAPPRIS ALT2 TSL 2 BASIC21.84■■□□□ 1.09
RAB38P57729 DDX42-201ENST00000359353 2783 ntTSL 5 BASIC21.84■■□□□ 1.09
RAB38P57729 ATP13A2-215ENST00000617114 1723 ntTSL 5 BASIC21.84■■□□□ 1.09
RAB38P57729 PTOV1-220ENST00000601675 1587 ntAPPRIS P1 TSL 1 (best) BASIC21.84■■□□□ 1.09
RAB38P57729 HSPE1-201ENST00000233893 950 ntAPPRIS P1 TSL 1 (best) BASIC21.84■■□□□ 1.09
RAB38P57729 NOX4-204ENST00000393282 560 ntTSL 1 (best) BASIC21.84■■□□□ 1.09
RAB38P57729 AC026785.2-201ENST00000511821 867 ntTSL 2 BASIC21.84■■□□□ 1.09
RAB38P57729 AC138207.2-201ENST00000583377 492 ntTSL 2 BASIC21.84■■□□□ 1.09
RAB38P57729 PRMT5-228ENST00000627278 129 ntTSL 5 BASIC21.84■■□□□ 1.09
RAB38P57729 PHF11-202ENST00000378319 1359 ntAPPRIS P3 TSL 1 (best) BASIC21.84■■□□□ 1.09
RAB38P57729 AC021242.3-201ENST00000607598 1377 ntBASIC21.84■■□□□ 1.09
RAB38P57729 AL139125.2-201ENST00000623134 1869 ntBASIC21.83■■□□□ 1.09
RAB38P57729 CKB-201ENST00000348956 1709 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.09
RAB38P57729 PKIG-206ENST00000372892 1338 ntAPPRIS P1 TSL 2 BASIC21.83■■□□□ 1.09
RAB38P57729 SDF4-202ENST00000360001 1956 ntAPPRIS ALT2 TSL 1 (best) BASIC21.83■■□□□ 1.09
RAB38P57729 ZNF205-202ENST00000382192 2062 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.09
RAB38P57729 AZIN2-201ENST00000294517 2182 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.09
RAB38P57729 HOXC-AS1-201ENST00000505700 548 ntTSL 2 BASIC21.83■■□□□ 1.09
RAB38P57729 KRT125P-201ENST00000546827 989 ntBASIC21.83■■□□□ 1.09
RAB38P57729 HOMER3-205ENST00000542541 1607 ntAPPRIS P3 TSL 1 (best) BASIC21.83■■□□□ 1.08
RAB38P57729 CCDC24-201ENST00000372318 1463 ntAPPRIS P2 TSL 1 (best) BASIC21.83■■□□□ 1.08
RAB38P57729 KRT72-203ENST00000537672 1813 ntAPPRIS P1 TSL 2 BASIC21.83■■□□□ 1.08
RAB38P57729 TBL2-222ENST00000610724 2165 ntTSL 5 BASIC21.82■■□□□ 1.08
RAB38P57729 JAG2-202ENST00000347004 5720 ntTSL 1 (best) BASIC21.82■■□□□ 1.08
RAB38P57729 AC239859.2-201ENST00000444165 318 ntBASIC21.82■■□□□ 1.08
RAB38P57729 KLHL26-202ENST00000595182 522 ntTSL 4 BASIC21.82■■□□□ 1.08
RAB38P57729 AC012123.1-201ENST00000426194 1661 ntTSL 5 BASIC21.82■■□□□ 1.08
RAB38P57729 SLBP-206ENST00000489418 1977 ntAPPRIS P2 TSL 1 (best) BASIC21.81■■□□□ 1.08
RAB38P57729 DAZAP1-205ENST00000587079 2086 ntAPPRIS ALT1 TSL 5 BASIC21.81■■□□□ 1.08
RAB38P57729 HECA-201ENST00000367658 5614 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
RAB38P57729 RPIA-201ENST00000283646 1848 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
RAB38P57729 ZNF180-205ENST00000587047 525 ntTSL 4 BASIC21.81■■□□□ 1.08
RAB38P57729 MSX2-201ENST00000239243 2241 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
RAB38P57729 ARL6IP4-210ENST00000453766 1491 ntAPPRIS ALT2 TSL 1 (best) BASIC21.81■■□□□ 1.08
RAB38P57729 PFKFB4-204ENST00000416568 1575 ntTSL 1 (best) BASIC21.81■■□□□ 1.08
RAB38P57729 GTF2IP1-204ENST00000616377 2632 ntTSL 2 BASIC21.81■■□□□ 1.08
RAB38P57729 CDH23-206ENST00000398842 1759 ntTSL 5 BASIC21.81■■□□□ 1.08
RAB38P57729 TSEN34-201ENST00000302937 2294 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
RAB38P57729 PNLIPRP2-205ENST00000611850 1407 ntTSL 5 BASIC21.8■■□□□ 1.08
RAB38P57729 MRPL10-202ENST00000351111 1725 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
RAB38P57729 SYNGR3-201ENST00000248121 2051 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
RAB38P57729 ITM2C-203ENST00000335005 1889 ntTSL 1 (best) BASIC21.8■■□□□ 1.08
RAB38P57729 HMX3-201ENST00000357878 1173 ntAPPRIS P1 TSL 2 BASIC21.8■■□□□ 1.08
RAB38P57729 TK2-202ENST00000417693 1046 ntTSL 2 BASIC21.8■■□□□ 1.08
RAB38P57729 C7orf25-205ENST00000438029 1743 ntAPPRIS P1 TSL 2 BASIC21.8■■□□□ 1.08
RAB38P57729 DOK3-205ENST00000501403 1872 ntAPPRIS P1 TSL 5 BASIC21.79■■□□□ 1.08
RAB38P57729 NKX2-8-201ENST00000258829 1261 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
RAB38P57729 EIF3J-203ENST00000535391 925 ntTSL 2 BASIC21.79■■□□□ 1.08
RAB38P57729 ESR2-202ENST00000341099 2060 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
RAB38P57729 AC004691.2-201ENST00000509504 1531 ntAPPRIS P1 TSL 5 BASIC21.79■■□□□ 1.08
RAB38P57729 FAM107A-203ENST00000447756 1432 ntTSL 1 (best) BASIC21.79■■□□□ 1.08
RAB38P57729 ST3GAL5-231ENST00000639119 2131 ntTSL 5 BASIC21.79■■□□□ 1.08
RAB38P57729 GOLGA7-201ENST00000357743 2027 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
RAB38P57729 TMEM202-AS1-202ENST00000565181 2325 ntBASIC21.78■■□□□ 1.08
RAB38P57729 TARBP1-201ENST00000040877 5130 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
RAB38P57729 CENPX-202ENST00000392359 805 ntAPPRIS P1 TSL 2 BASIC21.78■■□□□ 1.08
RAB38P57729 SENP5-202ENST00000419026 973 ntTSL 3 BASIC21.78■■□□□ 1.08
RAB38P57729 FAM72B-203ENST00000452190 748 ntTSL 3 BASIC21.78■■□□□ 1.08
Retrieved 100 of 98,524 protein–RNA pairs in 26.5 ms