Protein–RNA interactions for Protein: P56645

PER3, Period circadian protein homolog 3, humanhuman

Predictions only

Length 1,201 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PER3P56645 AL117332.1-201ENST00000622628 974 ntBASIC21.33■■□□□ 1.01
PER3P56645 U2AF1-204ENST00000459639 1675 ntTSL 1 (best) BASIC21.33■■□□□ 1
PER3P56645 U2AF1L5-204ENST00000623375 1675 ntTSL 1 (best) BASIC21.33■■□□□ 1
PER3P56645 TM9SF3-201ENST00000371142 6141 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1
PER3P56645 ARRDC2-202ENST00000379656 2528 ntTSL 2 BASIC21.32■■□□□ 1
PER3P56645 AL022341.2-201ENST00000573609 1417 ntTSL 3 BASIC21.32■■□□□ 1
PER3P56645 CRACR2B-201ENST00000450448 1663 ntTSL 1 (best) BASIC21.32■■□□□ 1
PER3P56645 VRK2-202ENST00000412104 1916 ntTSL 1 (best) BASIC21.32■■□□□ 1
PER3P56645 TSPAN17-204ENST00000503045 1019 ntTSL 5 BASIC21.32■■□□□ 1
PER3P56645 GDF6-202ENST00000620978 973 ntTSL 1 (best) BASIC21.32■■□□□ 1
PER3P56645 SH2B1-205ENST00000538342 1532 ntTSL 2 BASIC21.32■■□□□ 1
PER3P56645 CACNG6-203ENST00000352529 1635 ntTSL 5 BASIC21.32■■□□□ 1
PER3P56645 EHBP1L1-201ENST00000309295 5185 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
PER3P56645 DACT1-201ENST00000335867 2571 ntAPPRIS P3 TSL 1 (best) BASIC21.31■■□□□ 1
PER3P56645 HES4-201ENST00000304952 899 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
PER3P56645 MIR3621-201ENST00000580529 85 ntBASIC21.31■■□□□ 1
PER3P56645 TMC6-218ENST00000591436 1155 ntTSL 1 (best) BASIC21.31■■□□□ 1
PER3P56645 PRSS21-201ENST00000005995 1101 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
PER3P56645 AC005837.3-201ENST00000612163 286 ntBASIC21.31■■□□□ 1
PER3P56645 AC093762.1-201ENST00000641981 837 ntAPPRIS P1 BASIC21.31■■□□□ 1
PER3P56645 UBALD2-201ENST00000327490 1593 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
PER3P56645 NRM-201ENST00000259953 1755 ntAPPRIS P2 TSL 2 BASIC21.31■■□□□ 1
PER3P56645 R3HCC1-201ENST00000265806 1773 ntAPPRIS ALT2 TSL 1 (best) BASIC21.31■■□□□ 1
PER3P56645 PPM1J-201ENST00000309276 1863 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
PER3P56645 BMP6-201ENST00000283147 2780 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
PER3P56645 UNCX-201ENST00000316333 2048 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
PER3P56645 GBX1-201ENST00000297537 1092 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
PER3P56645 AC090587.2-201ENST00000430222 527 ntTSL 2 BASIC21.3■■□□□ 1
PER3P56645 MMP25-AS1-209ENST00000576250 779 ntTSL 5 BASIC21.3■■□□□ 1
PER3P56645 PPP1R14A-204ENST00000591291 433 ntTSL 5 BASIC21.3■■□□□ 1
PER3P56645 AC110285.6-201ENST00000617652 491 ntBASIC21.3■■□□□ 1
PER3P56645 HAS1-205ENST00000601714 2086 ntTSL 1 (best) BASIC21.3■■□□□ 1
PER3P56645 DUSP22-201ENST00000344450 1485 ntTSL 1 (best) BASIC21.29■■□□□ 1
PER3P56645 CLEC2L-201ENST00000422142 1359 ntAPPRIS P2 TSL 3 BASIC21.29■■□□□ 1
PER3P56645 ZC3H14-202ENST00000302216 2560 ntTSL 1 (best) BASIC21.29■■□□□ 1
PER3P56645 ATAD3A-203ENST00000378756 2492 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
PER3P56645 C15orf59-201ENST00000379822 1342 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
PER3P56645 C21orf2-202ENST00000339818 2233 ntAPPRIS P3 TSL 1 (best) BASIC21.28■■□□□ 1
PER3P56645 NFU1-203ENST00000410022 1467 ntAPPRIS P3 TSL 1 (best) BASIC21.28■■□□□ 1
PER3P56645 AC096631.2-201ENST00000436136 790 ntBASIC21.28■■□□□ 1
PER3P56645 AL357078.1-201ENST00000448344 310 ntTSL 4 BASIC21.28■■□□□ 1
PER3P56645 AC133561.4-201ENST00000566112 224 ntBASIC21.28■■□□□ 1
PER3P56645 CCZ1B-201ENST00000316731 2885 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
PER3P56645 ERGIC1-202ENST00000393784 2881 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
PER3P56645 HTRA1-201ENST00000368984 2120 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
PER3P56645 ADGRB1-202ENST00000517894 6241 ntAPPRIS P1 TSL 5 BASIC21.27■■□□□ 1
PER3P56645 HNRNPAB-208ENST00000515193 1595 ntAPPRIS ALT2 TSL 5 BASIC21.27■■□□□ 1
PER3P56645 BMP2K-204ENST00000502871 3195 ntAPPRIS P3 TSL 1 (best) BASIC21.27■■□□□ 1
PER3P56645 CLIC3-203ENST00000494426 1017 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
PER3P56645 MIR4281-201ENST00000580852 62 ntBASIC21.27■■□□□ 1
PER3P56645 AL445237.1-202ENST00000604581 425 ntTSL 5 BASIC21.27■■□□□ 1
PER3P56645 DAZAP1-202ENST00000336761 2290 ntTSL 5 BASIC21.27■■□□□ 1
PER3P56645 TMEM64-203ENST00000458549 4997 ntAPPRIS P1 TSL 1 (best) BASIC21.27■□□□□ 0.99
PER3P56645 CCDC71L-201ENST00000315965 1575 ntAPPRIS ALT2 TSL 5 BASIC21.27■□□□□ 0.99
PER3P56645 TMEM203-201ENST00000343666 1557 ntAPPRIS P1 BASIC21.27■□□□□ 0.99
PER3P56645 ADGRA2-202ENST00000412232 5651 ntAPPRIS P1 TSL 1 (best) BASIC21.27■□□□□ 0.99
PER3P56645 AC133561.1-201ENST00000568600 2415 ntBASIC21.26■□□□□ 0.99
PER3P56645 HABP4-202ENST00000375251 2304 ntTSL 1 (best) BASIC21.26■□□□□ 0.99
PER3P56645 LIN7B-202ENST00000391864 582 ntTSL 3 BASIC21.26■□□□□ 0.99
PER3P56645 AC004540.2-202ENST00000451264 508 ntTSL 2 BASIC21.26■□□□□ 0.99
PER3P56645 HNRNPUL1-222ENST00000617774 451 ntTSL 5 BASIC21.26■□□□□ 0.99
PER3P56645 CEBPB-AS1-201ENST00000613921 2648 ntTSL 3 BASIC21.26■□□□□ 0.99
PER3P56645 AC145676.1-201ENST00000514988 2004 ntBASIC21.26■□□□□ 0.99
PER3P56645 AZIN2-201ENST00000294517 2182 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
PER3P56645 CASP9-202ENST00000348549 1621 ntTSL 1 (best) BASIC21.26■□□□□ 0.99
PER3P56645 CENPVL1-201ENST00000602548 1620 ntAPPRIS P1 BASIC21.26■□□□□ 0.99
PER3P56645 CENPVL2-201ENST00000634648 1620 ntAPPRIS P1 BASIC21.26■□□□□ 0.99
PER3P56645 CHKA-202ENST00000356135 1755 ntAPPRIS ALT2 TSL 1 (best) BASIC21.25■□□□□ 0.99
PER3P56645 CCDC154-201ENST00000389176 2212 ntAPPRIS P5 TSL 5 BASIC21.25■□□□□ 0.99
PER3P56645 FBXO7-206ENST00000452138 1535 ntTSL 2 BASIC21.25■□□□□ 0.99
PER3P56645 KAT8-206ENST00000543774 1846 ntAPPRIS P1 TSL 5 BASIC21.25■□□□□ 0.99
PER3P56645 PTH1R-201ENST00000313049 2123 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
PER3P56645 JMJD8-201ENST00000412368 2038 ntAPPRIS P2 TSL 1 (best) BASIC21.25■□□□□ 0.99
PER3P56645 HOMER3-203ENST00000433218 1418 ntAPPRIS ALT1 TSL 5 BASIC21.25■□□□□ 0.99
PER3P56645 SERTAD4-AS1-202ENST00000475406 591 ntTSL 2 BASIC21.25■□□□□ 0.99
PER3P56645 CDKN2A-208ENST00000498124 880 ntTSL 1 (best) BASIC21.25■□□□□ 0.99
PER3P56645 SLC16A10-206ENST00000612036 1231 ntTSL 5 BASIC21.25■□□□□ 0.99
PER3P56645 EGR4-201ENST00000436467 2377 ntAPPRIS ALT2 TSL 1 (best) BASIC21.25■□□□□ 0.99
PER3P56645 CAPN12-212ENST00000601953 2381 ntTSL 5 BASIC21.25■□□□□ 0.99
PER3P56645 REEP6-201ENST00000233596 1794 ntAPPRIS P2 TSL 1 (best) BASIC21.25■□□□□ 0.99
PER3P56645 POU2F2-215ENST00000560398 1788 ntTSL 5 BASIC21.25■□□□□ 0.99
PER3P56645 IRF2BP1-201ENST00000302165 2564 ntAPPRIS P1 BASIC21.25■□□□□ 0.99
PER3P56645 C19orf47-202ENST00000392035 2126 ntAPPRIS ALT2 TSL 1 (best) BASIC21.25■□□□□ 0.99
PER3P56645 RBM33-201ENST00000287912 1404 ntTSL 2 BASIC21.24■□□□□ 0.99
PER3P56645 ZNF428-201ENST00000300811 1412 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
PER3P56645 FGD5-AS1-204ENST00000430166 1184 ntTSL 2 BASIC21.24■□□□□ 0.99
PER3P56645 CHTF8-208ENST00000522091 863 ntTSL 2 BASIC21.24■□□□□ 0.99
PER3P56645 NPEPL1-201ENST00000356091 2378 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
PER3P56645 BSCL2-205ENST00000403550 1693 ntAPPRIS P3 TSL 5 BASIC21.24■□□□□ 0.99
PER3P56645 ID4-201ENST00000378700 2344 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
PER3P56645 ATPAF1-213ENST00000574428 1760 ntTSL 1 (best) BASIC21.23■□□□□ 0.99
PER3P56645 FSD1-204ENST00000597590 1634 ntTSL 5 BASIC21.23■□□□□ 0.99
PER3P56645 FOXB2-201ENST00000376708 1299 ntAPPRIS P1 BASIC21.23■□□□□ 0.99
PER3P56645 CFAP77-202ENST00000393215 901 ntAPPRIS ALT2 TSL 5 BASIC21.23■□□□□ 0.99
PER3P56645 HIST1H2AL-201ENST00000613174 393 ntAPPRIS P1 BASIC21.23■□□□□ 0.99
PER3P56645 LY6H-205ENST00000615409 980 ntAPPRIS P3 TSL 1 (best) BASIC21.23■□□□□ 0.99
PER3P56645 NDEL1-201ENST00000334527 2372 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
PER3P56645 GTF2E2-201ENST00000355904 1762 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
PER3P56645 LRRC14B-201ENST00000328278 1573 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
PER3P56645 PDS5A-202ENST00000503396 2685 ntTSL 1 (best) BASIC21.22■□□□□ 0.99
Retrieved 100 of 98,524 protein–RNA pairs in 13.8 ms