Protein–RNA interactions for Protein: P55854

SUMO3, Small ubiquitin-related modifier 3, humanhuman

Predicted RBP Predictions only

Length 103 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SUMO3P55854 MPP5-205ENST00000556345 1163 ntTSL 2 BASIC21.09■□□□□ 0.97
SUMO3P55854 GTF2IP1-204ENST00000616377 2632 ntTSL 2 BASIC21.09■□□□□ 0.97
SUMO3P55854 PIP5K1C-203ENST00000539785 2289 ntAPPRIS ALT2 TSL 2 BASIC21.09■□□□□ 0.97
SUMO3P55854 SEPT2-205ENST00000401990 1734 ntTSL 1 (best) BASIC21.09■□□□□ 0.97
SUMO3P55854 ECEL1-202ENST00000409941 2322 ntAPPRIS ALT1 TSL 1 (best) BASIC21.09■□□□□ 0.97
SUMO3P55854 CDH23-206ENST00000398842 1759 ntTSL 5 BASIC21.08■□□□□ 0.97
SUMO3P55854 R3HDM4-203ENST00000587975 1765 ntTSL 3 BASIC21.08■□□□□ 0.97
SUMO3P55854 ZNF205-202ENST00000382192 2062 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
SUMO3P55854 DACT1-206ENST00000556859 2239 ntAPPRIS ALT2 TSL 2 BASIC21.08■□□□□ 0.97
SUMO3P55854 JAG2-202ENST00000347004 5720 ntTSL 1 (best) BASIC21.08■□□□□ 0.97
SUMO3P55854 DOK3-205ENST00000501403 1872 ntAPPRIS P1 TSL 5 BASIC21.08■□□□□ 0.97
SUMO3P55854 SNRNP70-206ENST00000598441 1574 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
SUMO3P55854 ATP13A2-215ENST00000617114 1723 ntTSL 5 BASIC21.08■□□□□ 0.97
SUMO3P55854 H2AFB1-201ENST00000620016 587 ntAPPRIS P1 BASIC21.08■□□□□ 0.97
SUMO3P55854 KRT72-203ENST00000537672 1813 ntAPPRIS P1 TSL 2 BASIC21.08■□□□□ 0.96
SUMO3P55854 LINC00543-201ENST00000567234 1845 ntBASIC21.08■□□□□ 0.96
SUMO3P55854 DAZAP1-205ENST00000587079 2086 ntAPPRIS ALT1 TSL 5 BASIC21.08■□□□□ 0.96
SUMO3P55854 PXK-201ENST00000302779 1974 ntTSL 1 (best) BASIC21.07■□□□□ 0.96
SUMO3P55854 NOX4-204ENST00000393282 560 ntTSL 1 (best) BASIC21.07■□□□□ 0.96
SUMO3P55854 PLEKHA8-202ENST00000396257 1907 ntTSL 1 (best) BASIC21.07■□□□□ 0.96
SUMO3P55854 HOMER3-205ENST00000542541 1607 ntAPPRIS P3 TSL 1 (best) BASIC21.07■□□□□ 0.96
SUMO3P55854 MRPL10-202ENST00000351111 1725 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
SUMO3P55854 SYNGR3-201ENST00000248121 2051 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
SUMO3P55854 ESR2-202ENST00000341099 2060 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
SUMO3P55854 AZIN2-201ENST00000294517 2182 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
SUMO3P55854 AP000802.1-201ENST00000500537 1934 ntTSL 1 (best) BASIC21.06■□□□□ 0.96
SUMO3P55854 KMT2E-AS1-201ENST00000453677 736 ntTSL 3 BASIC21.06■□□□□ 0.96
SUMO3P55854 CTDSP2-203ENST00000547701 988 ntTSL 1 (best) BASIC21.06■□□□□ 0.96
SUMO3P55854 AC137630.3-201ENST00000607245 391 ntBASIC21.06■□□□□ 0.96
SUMO3P55854 MXI1-201ENST00000239007 2424 ntAPPRIS ALT1 TSL 1 (best) BASIC21.06■□□□□ 0.96
SUMO3P55854 ARL6IP4-210ENST00000453766 1491 ntAPPRIS ALT2 TSL 1 (best) BASIC21.06■□□□□ 0.96
SUMO3P55854 AF131216.4-201ENST00000638924 1588 ntBASIC21.06■□□□□ 0.96
SUMO3P55854 GOLGA7-201ENST00000357743 2027 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
SUMO3P55854 LINC01124-201ENST00000409786 2117 ntBASIC21.05■□□□□ 0.96
SUMO3P55854 PNLIPRP2-205ENST00000611850 1407 ntTSL 5 BASIC21.05■□□□□ 0.96
SUMO3P55854 AC004691.2-201ENST00000509504 1531 ntAPPRIS P1 TSL 5 BASIC21.05■□□□□ 0.96
SUMO3P55854 CKB-201ENST00000348956 1709 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
SUMO3P55854 LRRC1-201ENST00000370882 808 ntTSL 3 BASIC21.05■□□□□ 0.96
SUMO3P55854 OSCAR-206ENST00000391760 629 ntTSL 2 BASIC21.05■□□□□ 0.96
SUMO3P55854 ST3GAL6-AS1-203ENST00000488132 769 ntTSL 3 BASIC21.05■□□□□ 0.96
SUMO3P55854 PRTG-204ENST00000561292 833 ntTSL 3 BASIC21.05■□□□□ 0.96
SUMO3P55854 BTBD6-201ENST00000327471 1948 ntAPPRIS ALT2 TSL 2 BASIC21.05■□□□□ 0.96
SUMO3P55854 BOD1-202ENST00000311086 1562 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
SUMO3P55854 AC012123.1-201ENST00000426194 1661 ntTSL 5 BASIC21.05■□□□□ 0.96
SUMO3P55854 SLBP-206ENST00000489418 1977 ntAPPRIS P2 TSL 1 (best) BASIC21.05■□□□□ 0.96
SUMO3P55854 SLC35B2-204ENST00000537814 1715 ntTSL 2 BASIC21.04■□□□□ 0.96
SUMO3P55854 GJC1-209ENST00000592524 1837 ntAPPRIS P1 TSL 2 BASIC21.04■□□□□ 0.96
SUMO3P55854 LBH-205ENST00000407930 756 ntTSL 2 BASIC21.04■□□□□ 0.96
SUMO3P55854 STK32C-205ENST00000456004 607 ntTSL 2 BASIC21.04■□□□□ 0.96
SUMO3P55854 TMEM170A-202ENST00000561878 1072 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
SUMO3P55854 AC009163.4-201ENST00000567194 530 ntAPPRIS P1 TSL 2 BASIC21.04■□□□□ 0.96
SUMO3P55854 CD37-213ENST00000598095 1598 ntTSL 2 BASIC21.04■□□□□ 0.96
SUMO3P55854 PTOV1-220ENST00000601675 1587 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
SUMO3P55854 FUT11-201ENST00000372841 2056 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
SUMO3P55854 ADIPOR1-201ENST00000340990 2177 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
SUMO3P55854 KCTD5-201ENST00000301738 2482 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
SUMO3P55854 SLC30A3-201ENST00000233535 2260 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
SUMO3P55854 SERP2-201ENST00000379179 784 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
SUMO3P55854 ST20-MTHFS-201ENST00000479961 859 ntAPPRIS P1 TSL 3 BASIC21.03■□□□□ 0.96
SUMO3P55854 DDX42-201ENST00000359353 2783 ntTSL 5 BASIC21.03■□□□□ 0.96
SUMO3P55854 MAP2K2-201ENST00000262948 1734 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
SUMO3P55854 AL022069.1-201ENST00000568025 1636 ntBASIC21.03■□□□□ 0.96
SUMO3P55854 TXNRD2-201ENST00000334363 1893 ntTSL 1 (best) BASIC21.03■□□□□ 0.96
SUMO3P55854 HTRA2-202ENST00000352222 1450 ntTSL 1 (best) BASIC21.02■□□□□ 0.96
SUMO3P55854 NEUROG3-201ENST00000242462 1376 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
SUMO3P55854 PTPN2-202ENST00000327283 1706 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
SUMO3P55854 SNHG12-212ENST00000531126 719 ntTSL 1 (best) BASIC21.02■□□□□ 0.96
SUMO3P55854 SUGCT-201ENST00000335693 1645 ntAPPRIS ALT2 TSL 1 (best) BASIC21.02■□□□□ 0.96
SUMO3P55854 ZNF174-202ENST00000344823 1557 ntTSL 1 (best) BASIC21.02■□□□□ 0.95
SUMO3P55854 ADSSL1-202ENST00000332972 1969 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
SUMO3P55854 PHF11-202ENST00000378319 1359 ntAPPRIS P3 TSL 1 (best) BASIC21.01■□□□□ 0.95
SUMO3P55854 ZFYVE28-202ENST00000503000 1874 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
SUMO3P55854 BX664725.1-201ENST00000438252 379 ntBASIC21.01■□□□□ 0.95
SUMO3P55854 RAET1E-AS1-203ENST00000606915 1210 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
SUMO3P55854 MIR663AHG-227ENST00000608084 765 ntTSL 5 BASIC21.01■□□□□ 0.95
SUMO3P55854 PREB-202ENST00000406567 1910 ntTSL 5 BASIC21.01■□□□□ 0.95
SUMO3P55854 LINC02043-201ENST00000419745 1832 ntTSL 2 BASIC21.01■□□□□ 0.95
SUMO3P55854 PFKFB4-204ENST00000416568 1575 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
SUMO3P55854 SLC35A2-201ENST00000247138 1672 ntAPPRIS P3 TSL 1 (best) BASIC21■□□□□ 0.95
SUMO3P55854 PGF-203ENST00000553716 1699 ntAPPRIS ALT2 TSL 1 (best) BASIC21■□□□□ 0.95
SUMO3P55854 AC011448.1-201ENST00000555938 1100 ntAPPRIS P1 TSL 2 BASIC21■□□□□ 0.95
SUMO3P55854 Z92544.1-202ENST00000571933 1220 ntBASIC21■□□□□ 0.95
SUMO3P55854 LSM7-204ENST00000587502 575 ntTSL 1 (best) BASIC21■□□□□ 0.95
SUMO3P55854 HSPBP1-202ENST00000433386 1572 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
SUMO3P55854 AL160276.1-201ENST00000636672 1312 ntAPPRIS P1 TSL 5 BASIC21■□□□□ 0.95
SUMO3P55854 CAMK1-201ENST00000256460 1488 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
SUMO3P55854 ZNF688-203ENST00000563276 1492 ntTSL 2 BASIC21■□□□□ 0.95
SUMO3P55854 EGR4-201ENST00000436467 2377 ntAPPRIS ALT2 TSL 1 (best) BASIC21■□□□□ 0.95
SUMO3P55854 LTBP3-212ENST00000529189 1997 ntTSL 2 BASIC20.99■□□□□ 0.95
SUMO3P55854 NPAS3-201ENST00000346562 5847 ntAPPRIS P3 TSL 1 (best) BASIC20.99■□□□□ 0.95
SUMO3P55854 CPSF4-204ENST00000436336 1738 ntAPPRIS ALT1 TSL 1 (best) BASIC20.99■□□□□ 0.95
SUMO3P55854 DHRS11-215ENST00000618403 1598 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
SUMO3P55854 VSTM2L-201ENST00000373459 831 ntTSL 3 BASIC20.99■□□□□ 0.95
SUMO3P55854 MYL12B-203ENST00000581193 1249 ntAPPRIS P1 TSL 3 BASIC20.99■□□□□ 0.95
SUMO3P55854 FAHD1-203ENST00000427358 1974 ntAPPRIS P1 BASIC20.99■□□□□ 0.95
SUMO3P55854 TMEM202-AS1-202ENST00000565181 2325 ntBASIC20.99■□□□□ 0.95
SUMO3P55854 KRT10-201ENST00000269576 2124 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
SUMO3P55854 MEIS3-201ENST00000331559 2104 ntAPPRIS ALT2 TSL 5 BASIC20.98■□□□□ 0.95
SUMO3P55854 RNF146-205ENST00000477776 762 ntTSL 3 BASIC20.98■□□□□ 0.95
SUMO3P55854 EIF3J-203ENST00000535391 925 ntTSL 2 BASIC20.98■□□□□ 0.95
Retrieved 100 of 98,524 protein–RNA pairs in 34.9 ms