Protein–RNA interactions for Protein: P54821

PRRX1, Paired mesoderm homeobox protein 1, humanhuman

Predictions only

Length 245 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRRX1P54821 PARD3-209ENST00000374790 5825 ntTSL 5 BASIC19.05■□□□□ 0.64
PRRX1P54821 R3HCC1-202ENST00000411463 1467 ntAPPRIS P5 TSL 5 BASIC19.05■□□□□ 0.64
PRRX1P54821 TAZ-216ENST00000613002 1485 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
PRRX1P54821 SLC22A18-201ENST00000312221 1628 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
PRRX1P54821 ARSB-206ENST00000565165 1772 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
PRRX1P54821 TMEM268-202ENST00000374049 4578 ntAPPRIS ALT1 TSL 5 BASIC19.05■□□□□ 0.64
PRRX1P54821 ONECUT3-201ENST00000382349 8318 ntAPPRIS P1 TSL 5 BASIC19.05■□□□□ 0.64
PRRX1P54821 NKAIN3-202ENST00000523211 1988 ntAPPRIS P1 TSL 2 BASIC19.04■□□□□ 0.64
PRRX1P54821 EGFL8-219ENST00000333845 1310 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
PRRX1P54821 MADCAM1-202ENST00000346144 1309 ntAPPRIS ALT2 TSL 1 (best) BASIC19.04■□□□□ 0.64
PRRX1P54821 RBM33-201ENST00000287912 1404 ntTSL 2 BASIC19.04■□□□□ 0.64
PRRX1P54821 KRT18P24-201ENST00000344739 1156 ntBASIC19.04■□□□□ 0.64
PRRX1P54821 FAM162B-201ENST00000368557 1036 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
PRRX1P54821 TSPAN10-204ENST00000611590 1068 ntAPPRIS ALT2 TSL 1 (best) BASIC19.04■□□□□ 0.64
PRRX1P54821 NR6A1-201ENST00000344523 1846 ntAPPRIS ALT2 TSL 5 BASIC19.04■□□□□ 0.64
PRRX1P54821 ATG16L2-205ENST00000534905 1614 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
PRRX1P54821 GADD45A-202ENST00000370986 1496 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
PRRX1P54821 SRR-201ENST00000344595 2728 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
PRRX1P54821 KRT8P33-201ENST00000508125 1423 ntBASIC19.03■□□□□ 0.64
PRRX1P54821 TMEM238-201ENST00000444469 1000 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
PRRX1P54821 ZNF606-203ENST00000547121 1196 ntTSL 2 BASIC19.03■□□□□ 0.64
PRRX1P54821 THA1P-201ENST00000590384 1145 ntBASIC19.03■□□□□ 0.64
PRRX1P54821 HSPBP1-201ENST00000255631 1768 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
PRRX1P54821 ANKRD28-201ENST00000399451 6564 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
PRRX1P54821 TMEM51-205ENST00000434578 1861 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
PRRX1P54821 NRG1-210ENST00000520407 1955 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
PRRX1P54821 BBC3-203ENST00000439096 1838 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
PRRX1P54821 AC010913.1-201ENST00000608612 420 ntTSL 2 BASIC19.02■□□□□ 0.64
PRRX1P54821 FAHD1-204ENST00000615972 757 ntTSL 5 BASIC19.02■□□□□ 0.64
PRRX1P54821 CIRBP-216ENST00000588090 1459 ntAPPRIS P3 TSL 3 BASIC19.02■□□□□ 0.63
PRRX1P54821 ZNF641-205ENST00000547026 1823 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.63
PRRX1P54821 CDK9-201ENST00000373264 2463 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
PRRX1P54821 MROH6-202ENST00000524906 1794 ntAPPRIS ALT2 TSL 3 BASIC19.01■□□□□ 0.63
PRRX1P54821 AC105219.1-201ENST00000531565 1963 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
PRRX1P54821 NAXE-203ENST00000368235 1125 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
PRRX1P54821 FAM173A-202ENST00000564000 1088 ntAPPRIS ALT2 TSL 2 BASIC19.01■□□□□ 0.63
PRRX1P54821 AC093390.2-201ENST00000638628 1007 ntTSL 5 BASIC19.01■□□□□ 0.63
PRRX1P54821 CLEC2L-201ENST00000422142 1359 ntAPPRIS P2 TSL 3 BASIC19.01■□□□□ 0.63
PRRX1P54821 CRACR2B-202ENST00000525077 1578 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
PRRX1P54821 MATK-204ENST00000585778 1994 ntAPPRIS ALT2 TSL 1 (best) BASIC19.01■□□□□ 0.63
PRRX1P54821 HOXB3-202ENST00000460160 1525 ntTSL 5 BASIC19■□□□□ 0.63
PRRX1P54821 TNIP2-206ENST00000510267 2006 ntAPPRIS ALT2 TSL 2 BASIC19■□□□□ 0.63
PRRX1P54821 AC093323.1-202ENST00000635031 2045 ntBASIC19■□□□□ 0.63
PRRX1P54821 TMPO-AS1-201ENST00000546421 738 ntTSL 5 BASIC19■□□□□ 0.63
PRRX1P54821 AC120024.1-201ENST00000562672 995 ntBASIC19■□□□□ 0.63
PRRX1P54821 SLC52A2-202ENST00000402965 1777 ntAPPRIS P1 TSL 2 BASIC19■□□□□ 0.63
PRRX1P54821 NAGS-201ENST00000293404 2182 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
PRRX1P54821 APBA3-201ENST00000316757 2075 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
PRRX1P54821 FEZ2-203ENST00000379245 2097 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
PRRX1P54821 RFC2-201ENST00000055077 1695 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
PRRX1P54821 LRRC14B-201ENST00000328278 1573 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
PRRX1P54821 PRELID1-201ENST00000303204 1261 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
PRRX1P54821 GAK-223ENST00000628912 497 ntTSL 5 BASIC18.99■□□□□ 0.63
PRRX1P54821 KCNT1-201ENST00000263604 5245 ntAPPRIS ALT2 TSL 5 BASIC18.99■□□□□ 0.63
PRRX1P54821 EED-207ENST00000528180 1745 ntTSL 5 BASIC18.99■□□□□ 0.63
PRRX1P54821 INPP5J-206ENST00000404453 1613 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
PRRX1P54821 AC006455.5-202ENST00000615248 2284 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
PRRX1P54821 MRPL4-207ENST00000590669 1423 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
PRRX1P54821 PYCR1-202ENST00000337943 1890 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
PRRX1P54821 RITA1-203ENST00000552495 1898 ntTSL 2 BASIC18.99■□□□□ 0.63
PRRX1P54821 BIN1-201ENST00000259238 2338 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
PRRX1P54821 LINC01970-201ENST00000581489 1810 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
PRRX1P54821 ST7-201ENST00000265437 2899 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
PRRX1P54821 AC103834.1-201ENST00000520383 144 ntBASIC18.98■□□□□ 0.63
PRRX1P54821 CCDC151-202ENST00000586836 1867 ntTSL 2 BASIC18.98■□□□□ 0.63
PRRX1P54821 DCAF15-201ENST00000254337 2278 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
PRRX1P54821 RFNG-201ENST00000310496 1828 ntAPPRIS P1 TSL 2 BASIC18.97■□□□□ 0.63
PRRX1P54821 PCSK6-218ENST00000619160 3093 ntAPPRIS ALT2 TSL 1 (best) BASIC18.97■□□□□ 0.63
PRRX1P54821 AC009531.1-201ENST00000442323 580 ntTSL 4 BASIC18.97■□□□□ 0.63
PRRX1P54821 AL355490.1-201ENST00000445808 805 ntTSL 3 BASIC18.97■□□□□ 0.63
PRRX1P54821 ERO1A-211ENST00000629528 998 ntTSL 5 BASIC18.97■□□□□ 0.63
PRRX1P54821 ZDHHC14-204ENST00000414563 3134 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
PRRX1P54821 SUGCT-209ENST00000628514 1591 ntAPPRIS P4 TSL 1 (best) BASIC18.97■□□□□ 0.63
PRRX1P54821 DLK2-201ENST00000357338 2038 ntAPPRIS P3 TSL 2 BASIC18.96■□□□□ 0.63
PRRX1P54821 PFN2-210ENST00000481767 1620 ntTSL 2 BASIC18.96■□□□□ 0.63
PRRX1P54821 WFDC1-201ENST00000219454 1534 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
PRRX1P54821 EPHA10-211ENST00000540011 720 ntTSL 5 BASIC18.96■□□□□ 0.63
PRRX1P54821 ACOT1-202ENST00000557556 1271 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
PRRX1P54821 MMP25-AS1-209ENST00000576250 779 ntTSL 5 BASIC18.96■□□□□ 0.63
PRRX1P54821 SLC22A31-206ENST00000614943 1860 ntTSL 5 BASIC18.96■□□□□ 0.63
PRRX1P54821 WNT11-201ENST00000322563 1930 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
PRRX1P54821 RARA-202ENST00000394081 2285 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
PRRX1P54821 ADAD2-202ENST00000315906 1995 ntAPPRIS ALT2 TSL 1 (best) BASIC18.95■□□□□ 0.62
PRRX1P54821 RPIA-201ENST00000283646 1848 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
PRRX1P54821 MYO10-205ENST00000507288 1677 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
PRRX1P54821 IGFBP6-201ENST00000301464 1169 ntAPPRIS P2 TSL 1 (best) BASIC18.95■□□□□ 0.62
PRRX1P54821 AC053527.1-201ENST00000502790 685 ntTSL 3 BASIC18.95■□□□□ 0.62
PRRX1P54821 PTRH1-208ENST00000543175 814 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
PRRX1P54821 AC103724.3-201ENST00000564481 992 ntBASIC18.95■□□□□ 0.62
PRRX1P54821 AC064853.4-201ENST00000641394 363 ntAPPRIS P1 BASIC18.95■□□□□ 0.62
PRRX1P54821 NFKBIB-204ENST00000572515 1929 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
PRRX1P54821 FOXA2-201ENST00000377115 2401 ntAPPRIS P3 TSL 1 (best) BASIC18.95■□□□□ 0.62
PRRX1P54821 DGCR6-208ENST00000608842 1837 ntTSL 2 BASIC18.95■□□□□ 0.62
PRRX1P54821 KAT5-208ENST00000530446 1697 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
PRRX1P54821 IRX4-202ENST00000505790 2538 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
PRRX1P54821 VDAC2-203ENST00000332211 1557 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
PRRX1P54821 AARD-201ENST00000378279 2299 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
PRRX1P54821 ANO8-204ENST00000630631 1905 ntTSL 5 BASIC18.94■□□□□ 0.62
PRRX1P54821 KLC3-201ENST00000391946 1780 ntAPPRIS P2 TSL 1 (best) BASIC18.94■□□□□ 0.62
PRRX1P54821 BDH1-207ENST00000441275 1605 ntTSL 5 BASIC18.94■□□□□ 0.62
Retrieved 100 of 98,524 protein–RNA pairs in 39.2 ms