Protein–RNA interactions for Protein: P51793

CLCN4, H(+)/Cl(-) exchange transporter 4, humanhuman

Predictions only

Length 760 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN4P51793 ARHGEF7-206ENST00000375741 5525 ntTSL 1 (best) BASIC24.63■■□□□ 1.53
CLCN4P51793 ZNF747-203ENST00000568028 1511 ntAPPRIS P1 TSL 2 BASIC24.63■■□□□ 1.53
CLCN4P51793 AP006621.1-201ENST00000532946 536 ntTSL 5 BASIC24.63■■□□□ 1.53
CLCN4P51793 AC142381.2-201ENST00000566120 298 ntBASIC24.63■■□□□ 1.53
CLCN4P51793 AL031432.3-201ENST00000607698 485 ntBASIC24.63■■□□□ 1.53
CLCN4P51793 SERF1A-202ENST00000354833 1889 ntTSL 1 (best) BASIC24.63■■□□□ 1.53
CLCN4P51793 SERF1B-201ENST00000380750 1889 ntTSL 1 (best) BASIC24.63■■□□□ 1.53
CLCN4P51793 SEPT2-205ENST00000401990 1734 ntTSL 1 (best) BASIC24.63■■□□□ 1.53
CLCN4P51793 WIPI2-204ENST00000404704 1663 ntTSL 5 BASIC24.62■■□□□ 1.53
CLCN4P51793 TRIM14-203ENST00000375098 1792 ntAPPRIS P1 TSL 2 BASIC24.62■■□□□ 1.53
CLCN4P51793 RCCD1-203ENST00000555155 1871 ntAPPRIS ALT1 TSL 5 BASIC24.62■■□□□ 1.53
CLCN4P51793 TAZ-213ENST00000601016 1889 ntTSL 1 (best) BASIC24.62■■□□□ 1.53
CLCN4P51793 EPCAM-201ENST00000263735 1724 ntAPPRIS P1 TSL 1 (best) BASIC24.62■■□□□ 1.53
CLCN4P51793 STMN4-201ENST00000265770 1250 ntAPPRIS P1 TSL 1 (best) BASIC24.62■■□□□ 1.53
CLCN4P51793 FOXB2-201ENST00000376708 1299 ntAPPRIS P1 BASIC24.62■■□□□ 1.53
CLCN4P51793 TMEM170A-206ENST00000569276 609 ntTSL 2 BASIC24.62■■□□□ 1.53
CLCN4P51793 AL136162.1-201ENST00000607711 1078 ntBASIC24.62■■□□□ 1.53
CLCN4P51793 BCAP31-207ENST00000458587 1810 ntTSL 1 (best) BASIC24.62■■□□□ 1.53
CLCN4P51793 KANSL2-215ENST00000553086 1830 ntTSL 5 BASIC24.62■■□□□ 1.53
CLCN4P51793 GADD45A-202ENST00000370986 1496 ntAPPRIS P1 TSL 1 (best) BASIC24.62■■□□□ 1.53
CLCN4P51793 MROH6-211ENST00000534459 1789 ntAPPRIS ALT2 TSL 2 BASIC24.62■■□□□ 1.53
CLCN4P51793 FAM107B-205ENST00000378467 2374 ntAPPRIS P1 TSL 1 (best) BASIC24.61■■□□□ 1.53
CLCN4P51793 C1QTNF12-201ENST00000330388 1036 ntAPPRIS P1 TSL 1 (best) BASIC24.61■■□□□ 1.53
CLCN4P51793 SRD5A1P1-201ENST00000442297 786 ntBASIC24.61■■□□□ 1.53
CLCN4P51793 AC092902.2-206ENST00000625484 846 ntTSL 5 BASIC24.61■■□□□ 1.53
CLCN4P51793 NPHS2-202ENST00000367616 1670 ntTSL 1 (best) BASIC24.61■■□□□ 1.53
CLCN4P51793 TMEM179-204ENST00000556573 1430 ntAPPRIS P1 TSL 3 BASIC24.61■■□□□ 1.53
CLCN4P51793 FLJ37453-201ENST00000317122 2473 ntTSL 2 BASIC24.6■■□□□ 1.53
CLCN4P51793 LINC00588-201ENST00000521663 1875 ntTSL 2 BASIC24.6■■□□□ 1.53
CLCN4P51793 CHST13-201ENST00000319340 1789 ntAPPRIS P1 TSL 1 (best) BASIC24.6■■□□□ 1.53
CLCN4P51793 SUDS3P1-201ENST00000505831 966 ntBASIC24.6■■□□□ 1.53
CLCN4P51793 TYROBP-203ENST00000544690 522 ntTSL 1 (best) BASIC24.6■■□□□ 1.53
CLCN4P51793 CAPNS1-205ENST00000588780 1035 ntAPPRIS ALT2 TSL 5 BASIC24.6■■□□□ 1.53
CLCN4P51793 KRTAP5-4-202ENST00000616115 660 ntAPPRIS ALT2 TSL 5 BASIC24.6■■□□□ 1.53
CLCN4P51793 JAG2-201ENST00000331782 5835 ntAPPRIS P1 TSL 1 (best) BASIC24.6■■□□□ 1.53
CLCN4P51793 HMCES-204ENST00000502878 1952 ntAPPRIS P1 TSL 1 (best) BASIC24.6■■□□□ 1.53
CLCN4P51793 CCDC166-201ENST00000542437 1320 ntAPPRIS P1 TSL 2 BASIC24.6■■□□□ 1.53
CLCN4P51793 AC135279.3-201ENST00000610945 1311 ntBASIC24.6■■□□□ 1.53
CLCN4P51793 RALB-203ENST00000420510 1252 ntAPPRIS P1 TSL 2 BASIC24.59■■□□□ 1.53
CLCN4P51793 CHAC1-201ENST00000444189 1204 ntTSL 1 (best) BASIC24.59■■□□□ 1.53
CLCN4P51793 AC004448.1-201ENST00000458332 883 ntBASIC24.59■■□□□ 1.53
CLCN4P51793 AL359317.1-201ENST00000556316 578 ntTSL 4 BASIC24.59■■□□□ 1.53
CLCN4P51793 SDS-201ENST00000257549 1606 ntAPPRIS P1 TSL 2 BASIC24.59■■□□□ 1.53
CLCN4P51793 IKBKG-211ENST00000615874 1460 ntTSL 5 BASIC24.58■■□□□ 1.53
CLCN4P51793 IKBKG-215ENST00000619941 1463 ntTSL 5 BASIC24.58■■□□□ 1.53
CLCN4P51793 WFDC1-201ENST00000219454 1534 ntAPPRIS P1 TSL 1 (best) BASIC24.58■■□□□ 1.53
CLCN4P51793 CADPS-215ENST00000490353 2669 ntTSL 5 BASIC24.58■■□□□ 1.53
CLCN4P51793 CDKN2D-201ENST00000335766 1086 ntAPPRIS P1 TSL 1 (best) BASIC24.58■■□□□ 1.53
CLCN4P51793 ZNF32-202ENST00000395797 1201 ntAPPRIS P1 TSL 2 BASIC24.58■■□□□ 1.53
CLCN4P51793 TMIE-201ENST00000326431 1824 ntAPPRIS P1 TSL 1 (best) BASIC24.58■■□□□ 1.53
CLCN4P51793 LCNL1-201ENST00000408973 1839 ntAPPRIS P1 TSL 2 BASIC24.58■■□□□ 1.53
CLCN4P51793 PNCK-215ENST00000447676 1585 ntTSL 2 BASIC24.58■■□□□ 1.52
CLCN4P51793 CKB-201ENST00000348956 1709 ntAPPRIS P1 TSL 1 (best) BASIC24.58■■□□□ 1.52
CLCN4P51793 PKM-203ENST00000389093 2279 ntTSL 5 BASIC24.58■■□□□ 1.52
CLCN4P51793 RCOR3-202ENST00000367006 2525 ntTSL 1 (best) BASIC24.57■■□□□ 1.52
CLCN4P51793 YRDC-201ENST00000373044 1826 ntAPPRIS P1 TSL 1 (best) BASIC24.57■■□□□ 1.52
CLCN4P51793 LYPD2-201ENST00000359228 594 ntAPPRIS P1 TSL 1 (best) BASIC24.57■■□□□ 1.52
CLCN4P51793 CLPSL2-201ENST00000360454 488 ntAPPRIS ALT2 TSL 1 (best) BASIC24.57■■□□□ 1.52
CLCN4P51793 PARD6B-202ENST00000396039 522 ntTSL 1 (best) BASIC24.57■■□□□ 1.52
CLCN4P51793 AC105935.1-201ENST00000424174 422 ntTSL 3 BASIC24.57■■□□□ 1.52
CLCN4P51793 LINC00472-204ENST00000436803 667 ntTSL 5 BASIC24.57■■□□□ 1.52
CLCN4P51793 AC018413.1-201ENST00000581996 1200 ntTSL 2 BASIC24.57■■□□□ 1.52
CLCN4P51793 GFRA4-201ENST00000290417 1427 ntAPPRIS ALT2 TSL 1 (best) BASIC24.57■■□□□ 1.52
CLCN4P51793 PEA15-201ENST00000360472 2471 ntAPPRIS P1 TSL 1 (best) BASIC24.57■■□□□ 1.52
CLCN4P51793 C6orf89-201ENST00000355190 1309 ntAPPRIS P3 TSL 1 (best) BASIC24.57■■□□□ 1.52
CLCN4P51793 BIN1-211ENST00000409400 2143 ntTSL 1 (best) BASIC24.56■■□□□ 1.52
CLCN4P51793 AC010501.1-201ENST00000606270 1962 ntBASIC24.56■■□□□ 1.52
CLCN4P51793 P2RX2-202ENST00000348800 1222 ntAPPRIS ALT2 TSL 1 (best) BASIC24.56■■□□□ 1.52
CLCN4P51793 P2RX2-204ENST00000351222 1140 ntTSL 1 (best) BASIC24.56■■□□□ 1.52
CLCN4P51793 P2RX2-207ENST00000449132 1113 ntTSL 1 (best) BASIC24.56■■□□□ 1.52
CLCN4P51793 CDKN2A-206ENST00000494262 989 ntTSL 3 BASIC24.56■■□□□ 1.52
CLCN4P51793 RARRES2P6-201ENST00000567333 442 ntBASIC24.56■■□□□ 1.52
CLCN4P51793 NEDD4L-237ENST00000617539 728 ntTSL 2 BASIC24.56■■□□□ 1.52
CLCN4P51793 SLC30A5-201ENST00000380860 1317 ntTSL 1 (best) BASIC24.56■■□□□ 1.52
CLCN4P51793 NXPH3-201ENST00000328741 2179 ntAPPRIS P1 TSL 1 (best) BASIC24.56■■□□□ 1.52
CLCN4P51793 SLC9A3R2-201ENST00000424542 2194 ntAPPRIS P1 TSL 1 (best) BASIC24.56■■□□□ 1.52
CLCN4P51793 RCE1-202ENST00000524506 1379 ntTSL 5 BASIC24.55■■□□□ 1.52
CLCN4P51793 AL355987.3-201ENST00000456614 735 ntAPPRIS P1 TSL 4 BASIC24.55■■□□□ 1.52
CLCN4P51793 SMARCA5-AS1-201ENST00000500800 945 ntTSL 1 (best) BASIC24.55■■□□□ 1.52
CLCN4P51793 AC024257.2-201ENST00000549699 147 ntBASIC24.55■■□□□ 1.52
CLCN4P51793 SRP68-202ENST00000539137 2386 ntTSL 2 BASIC24.55■■□□□ 1.52
CLCN4P51793 GATM-206ENST00000558336 1522 ntTSL 2 BASIC24.55■■□□□ 1.52
CLCN4P51793 GMPPB-202ENST00000308388 1582 ntAPPRIS P1 TSL 1 (best) BASIC24.54■■□□□ 1.52
CLCN4P51793 UBL7-202ENST00000395081 1427 ntAPPRIS P1 TSL 1 (best) BASIC24.54■■□□□ 1.52
CLCN4P51793 DAZAP1-202ENST00000336761 2290 ntTSL 5 BASIC24.54■■□□□ 1.52
CLCN4P51793 EDA-201ENST00000338901 1233 ntBASIC24.54■■□□□ 1.52
CLCN4P51793 GRAMD1B-217ENST00000640939 1212 ntTSL 5 BASIC24.54■■□□□ 1.52
CLCN4P51793 RPUSD1-207ENST00000565809 1918 ntTSL 2 BASIC24.54■■□□□ 1.52
CLCN4P51793 SERINC5-203ENST00000509193 1441 ntTSL 1 (best) BASIC24.53■■□□□ 1.52
CLCN4P51793 SMIM29-205ENST00000468145 903 ntTSL 2 BASIC24.53■■□□□ 1.52
CLCN4P51793 SMIM29-207ENST00000481533 1053 ntAPPRIS P1 TSL 1 (best) BASIC24.53■■□□□ 1.52
CLCN4P51793 ARHGEF7-205ENST00000375739 5375 ntTSL 1 (best) BASIC24.53■■□□□ 1.52
CLCN4P51793 ZNF219-201ENST00000360947 3071 ntAPPRIS P1 TSL 1 (best) BASIC24.52■■□□□ 1.52
CLCN4P51793 NAA38-201ENST00000333775 999 ntTSL 1 (best) BASIC24.52■■□□□ 1.52
CLCN4P51793 TNFRSF6B-201ENST00000369996 1124 ntAPPRIS P1 TSL 1 (best) BASIC24.52■■□□□ 1.52
CLCN4P51793 CDKN2A-210ENST00000530628 748 ntAPPRIS P1 TSL 5 BASIC24.52■■□□□ 1.52
CLCN4P51793 AL355001.2-201ENST00000620617 1191 ntBASIC24.52■■□□□ 1.52
CLCN4P51793 ABL2-203ENST00000392043 2140 ntTSL 1 (best) BASIC24.52■■□□□ 1.52
CLCN4P51793 NXPH4-201ENST00000349394 1804 ntAPPRIS P1 TSL 1 (best) BASIC24.51■■□□□ 1.51
CLCN4P51793 SCARA5-204ENST00000524352 1945 ntTSL 1 (best) BASIC24.51■■□□□ 1.51
Retrieved 100 of 98,524 protein–RNA pairs in 30.9 ms