Protein–RNA interactions for Protein: P51610

HCFC1, Host cell factor 1, humanhuman

Predictions only

Length 2,035 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HCFC1P51610 PTMA-205ENST00000410064 814 ntTSL 2 BASIC20.43■□□□□ 0.86
HCFC1P51610 AC024257.2-201ENST00000549699 147 ntBASIC20.43■□□□□ 0.86
HCFC1P51610 BAG1-212ENST00000641048 1038 ntAPPRIS P3 BASIC20.43■□□□□ 0.86
HCFC1P51610 NR6A1-203ENST00000416460 1898 ntAPPRIS ALT2 TSL 1 (best) BASIC20.42■□□□□ 0.86
HCFC1P51610 IFNL4-201ENST00000606380 1637 ntAPPRIS P5 TSL 1 (best) BASIC20.42■□□□□ 0.86
HCFC1P51610 PEX7-201ENST00000318471 1464 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
HCFC1P51610 MRPL46-201ENST00000312475 1019 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
HCFC1P51610 GFRA4-201ENST00000290417 1427 ntAPPRIS ALT2 TSL 1 (best) BASIC20.42■□□□□ 0.86
HCFC1P51610 TAZ-213ENST00000601016 1889 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
HCFC1P51610 AC096887.2-201ENST00000623443 1957 ntBASIC20.41■□□□□ 0.86
HCFC1P51610 KLRG2-202ENST00000393039 1148 ntTSL 5 BASIC20.41■□□□□ 0.86
HCFC1P51610 ZNF821-201ENST00000313565 1874 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
HCFC1P51610 TTBK2-205ENST00000567274 1777 ntTSL 5 BASIC20.41■□□□□ 0.86
HCFC1P51610 MEIS1-AS3-201ENST00000454167 707 ntTSL 4 BASIC20.41■□□□□ 0.86
HCFC1P51610 KIAA1456-206ENST00000528753 2392 ntTSL 2 BASIC20.41■□□□□ 0.86
HCFC1P51610 IRAK1-205ENST00000429936 2127 ntTSL 5 BASIC20.4■□□□□ 0.86
HCFC1P51610 LINC00588-201ENST00000521663 1875 ntTSL 2 BASIC20.4■□□□□ 0.86
HCFC1P51610 RPUSD1-207ENST00000565809 1918 ntTSL 2 BASIC20.4■□□□□ 0.86
HCFC1P51610 CARD19-201ENST00000375464 855 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
HCFC1P51610 AC104564.3-201ENST00000582367 638 ntBASIC20.4■□□□□ 0.86
HCFC1P51610 SLIT1-203ENST00000371041 1695 ntTSL 2 BASIC20.4■□□□□ 0.86
HCFC1P51610 HSPBP1-201ENST00000255631 1768 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
HCFC1P51610 RRNAD1-201ENST00000368216 2254 ntAPPRIS P3 TSL 1 (best) BASIC20.4■□□□□ 0.86
HCFC1P51610 RDH14-201ENST00000381249 1587 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.86
HCFC1P51610 FBXL6-202ENST00000455319 1727 ntAPPRIS ALT2 TSL 1 (best) BASIC20.39■□□□□ 0.86
HCFC1P51610 AC090877.2-201ENST00000558441 1738 ntBASIC20.39■□□□□ 0.86
HCFC1P51610 AC097639.1-201ENST00000565519 1891 ntBASIC20.39■□□□□ 0.85
HCFC1P51610 TCEA1-211ENST00000522635 1432 ntTSL 2 BASIC20.39■□□□□ 0.85
HCFC1P51610 EDA-201ENST00000338901 1233 ntBASIC20.39■□□□□ 0.85
HCFC1P51610 CDKN2A-206ENST00000494262 989 ntTSL 3 BASIC20.39■□□□□ 0.85
HCFC1P51610 ARMC10-205ENST00000428183 2445 ntTSL 1 (best) BASIC20.39■□□□□ 0.85
HCFC1P51610 NR6A1-201ENST00000344523 1846 ntAPPRIS ALT2 TSL 5 BASIC20.38■□□□□ 0.85
HCFC1P51610 PEX26-202ENST00000399744 1672 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
HCFC1P51610 C7orf49-203ENST00000430372 1579 ntTSL 5 BASIC20.38■□□□□ 0.85
HCFC1P51610 CPNE1-202ENST00000352393 2147 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
HCFC1P51610 IL20RA-202ENST00000367746 1244 ntTSL 2 BASIC20.38■□□□□ 0.85
HCFC1P51610 CCDC107-203ENST00000378407 899 ntAPPRIS ALT2 TSL 2 BASIC20.38■□□□□ 0.85
HCFC1P51610 FLT1-202ENST00000539099 1911 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
HCFC1P51610 RUNDC3A-201ENST00000225441 1821 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
HCFC1P51610 DAZAP1-202ENST00000336761 2290 ntTSL 5 BASIC20.38■□□□□ 0.85
HCFC1P51610 UBL7-202ENST00000395081 1427 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
HCFC1P51610 PRSS22-201ENST00000161006 1386 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
HCFC1P51610 SERGEF-219ENST00000532265 1124 ntTSL 2 BASIC20.37■□□□□ 0.85
HCFC1P51610 C1QTNF1-206ENST00000579760 1672 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
HCFC1P51610 KIAA2013-201ENST00000376572 2815 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
HCFC1P51610 RAB33A-201ENST00000257017 1258 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
HCFC1P51610 SMIM29-205ENST00000468145 903 ntTSL 2 BASIC20.37■□□□□ 0.85
HCFC1P51610 SMIM29-207ENST00000481533 1053 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
HCFC1P51610 AL136162.1-201ENST00000607711 1078 ntBASIC20.37■□□□□ 0.85
HCFC1P51610 ATP10A-207ENST00000619904 988 ntTSL 5 BASIC20.37■□□□□ 0.85
HCFC1P51610 GRAMD1B-217ENST00000640939 1212 ntTSL 5 BASIC20.37■□□□□ 0.85
HCFC1P51610 PNCK-215ENST00000447676 1585 ntTSL 2 BASIC20.37■□□□□ 0.85
HCFC1P51610 ZDHHC20-203ENST00000400590 1869 ntAPPRIS ALT2 TSL 5 BASIC20.37■□□□□ 0.85
HCFC1P51610 MSANTD2-201ENST00000239614 2495 ntTSL 2 BASIC20.37■□□□□ 0.85
HCFC1P51610 TST-202ENST00000403892 1797 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
HCFC1P51610 SDS-201ENST00000257549 1606 ntAPPRIS P1 TSL 2 BASIC20.36■□□□□ 0.85
HCFC1P51610 GNB2-203ENST00000393926 1641 ntAPPRIS P1 TSL 5 BASIC20.36■□□□□ 0.85
HCFC1P51610 AC105265.2-201ENST00000467189 838 ntBASIC20.36■□□□□ 0.85
HCFC1P51610 SHF-207ENST00000560540 2062 ntTSL 5 BASIC20.36■□□□□ 0.85
HCFC1P51610 ERN1-208ENST00000606895 2068 ntBASIC20.36■□□□□ 0.85
HCFC1P51610 PRKAR1B-203ENST00000403562 1917 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
HCFC1P51610 SDSL-201ENST00000345635 1397 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
HCFC1P51610 CRACR2B-202ENST00000525077 1578 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
HCFC1P51610 KLC1-225ENST00000557575 2188 ntTSL 5 BASIC20.35■□□□□ 0.85
HCFC1P51610 PLBD2-202ENST00000545182 2321 ntTSL 2 BASIC20.35■□□□□ 0.85
HCFC1P51610 AC136475.3-202ENST00000534742 812 ntTSL 2 BASIC20.35■□□□□ 0.85
HCFC1P51610 CEND1-201ENST00000330106 1649 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
HCFC1P51610 AKAP8L-208ENST00000595465 1933 ntTSL 2 BASIC20.35■□□□□ 0.85
HCFC1P51610 REST-212ENST00000640343 1352 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
HCFC1P51610 CDKN2D-201ENST00000335766 1086 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
HCFC1P51610 LBX2-202ENST00000377566 1186 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
HCFC1P51610 ZNF32-202ENST00000395797 1201 ntAPPRIS P1 TSL 2 BASIC20.34■□□□□ 0.85
HCFC1P51610 PHF23-212ENST00000576955 1944 ntTSL 2 BASIC20.34■□□□□ 0.85
HCFC1P51610 GATM-206ENST00000558336 1522 ntTSL 2 BASIC20.34■□□□□ 0.85
HCFC1P51610 YWHAH-201ENST00000248975 1825 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
HCFC1P51610 TMIE-201ENST00000326431 1824 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
HCFC1P51610 GADD45A-202ENST00000370986 1496 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
HCFC1P51610 HSPE1-203ENST00000409729 478 ntTSL 2 BASIC20.34■□□□□ 0.85
HCFC1P51610 CHAC1-201ENST00000444189 1204 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
HCFC1P51610 WDR86-AS1-204ENST00000489632 751 ntTSL 3 BASIC20.34■□□□□ 0.85
HCFC1P51610 AQP10-201ENST00000324978 1791 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
HCFC1P51610 BCAP31-207ENST00000458587 1810 ntTSL 1 (best) BASIC20.33■□□□□ 0.85
HCFC1P51610 NPHS2-202ENST00000367616 1670 ntTSL 1 (best) BASIC20.33■□□□□ 0.85
HCFC1P51610 CCDC107-205ENST00000421582 1324 ntAPPRIS ALT2 TSL 2 BASIC20.33■□□□□ 0.84
HCFC1P51610 CCDC166-201ENST00000542437 1320 ntAPPRIS P1 TSL 2 BASIC20.33■□□□□ 0.84
HCFC1P51610 B3GALT4-204ENST00000451237 1694 ntAPPRIS P1 BASIC20.33■□□□□ 0.84
HCFC1P51610 MROH6-202ENST00000524906 1794 ntAPPRIS ALT2 TSL 3 BASIC20.33■□□□□ 0.84
HCFC1P51610 DUX4L19-201ENST00000557448 1267 ntBASIC20.32■□□□□ 0.84
HCFC1P51610 AF213884.3-201ENST00000563833 479 ntBASIC20.32■□□□□ 0.84
HCFC1P51610 IKBKG-211ENST00000615874 1460 ntTSL 5 BASIC20.32■□□□□ 0.84
HCFC1P51610 IKBKG-215ENST00000619941 1463 ntTSL 5 BASIC20.32■□□□□ 0.84
HCFC1P51610 BTBD6-204ENST00000463376 2195 ntAPPRIS ALT2 TSL 2 BASIC20.32■□□□□ 0.84
HCFC1P51610 MFSD7-202ENST00000347950 1599 ntTSL 2 BASIC20.32■□□□□ 0.84
HCFC1P51610 ATP6V0A2-209ENST00000613625 1620 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
HCFC1P51610 FXYD7-201ENST00000270310 712 ntAPPRIS P2 TSL 1 (best) BASIC20.32■□□□□ 0.84
HCFC1P51610 VAMP2-204ENST00000488857 874 ntAPPRIS ALT1 TSL 3 BASIC20.32■□□□□ 0.84
HCFC1P51610 AP001330.3-201ENST00000520123 633 ntBASIC20.32■□□□□ 0.84
HCFC1P51610 TYROBP-203ENST00000544690 522 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
HCFC1P51610 STEAP2-207ENST00000402625 1372 ntTSL 5 BASIC20.32■□□□□ 0.84
HCFC1P51610 OXSR1-203ENST00000446845 1908 ntTSL 5 BASIC20.32■□□□□ 0.84
Retrieved 100 of 98,524 protein–RNA pairs in 16.6 ms