Protein–RNA interactions for Protein: P49238

CX3CR1, CX3C chemokine receptor 1, humanhuman

Predictions only

Length 355 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CX3CR1P49238 C21orf2-202ENST00000339818 2233 ntAPPRIS P3 TSL 1 (best) BASIC20.34■□□□□ 0.85
CX3CR1P49238 RNPEP-202ENST00000367286 2282 ntTSL 5 BASIC20.33■□□□□ 0.85
CX3CR1P49238 ZNF74-204ENST00000405993 1839 ntAPPRIS ALT2 TSL 5 BASIC20.33■□□□□ 0.85
CX3CR1P49238 HERC2P9-201ENST00000507787 1023 ntTSL 1 (best) BASIC20.33■□□□□ 0.85
CX3CR1P49238 AC129492.7-201ENST00000622992 756 ntBASIC20.33■□□□□ 0.85
CX3CR1P49238 ONECUT3-201ENST00000382349 8318 ntAPPRIS P1 TSL 5 BASIC20.33■□□□□ 0.84
CX3CR1P49238 FKBP1A-211ENST00000618612 1518 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
CX3CR1P49238 ARG2-201ENST00000261783 2045 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
CX3CR1P49238 SNF8-202ENST00000502492 2319 ntAPPRIS P3 TSL 1 (best) BASIC20.32■□□□□ 0.84
CX3CR1P49238 C5orf58-204ENST00000521850 2113 ntAPPRIS ALT2 TSL 1 (best) BASIC20.32■□□□□ 0.84
CX3CR1P49238 HSD11B2-201ENST00000326152 1900 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
CX3CR1P49238 FUT11-201ENST00000372841 2056 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
CX3CR1P49238 IFI30-201ENST00000407280 1134 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
CX3CR1P49238 PSMG4-207ENST00000451246 824 ntTSL 3 BASIC20.32■□□□□ 0.84
CX3CR1P49238 LMAN2-208ENST00000515209 1149 ntAPPRIS ALT2 TSL 3 BASIC20.32■□□□□ 0.84
CX3CR1P49238 OXLD1-203ENST00000571503 803 ntTSL 2 BASIC20.32■□□□□ 0.84
CX3CR1P49238 EIF5A-211ENST00000576930 1439 ntAPPRIS P1 TSL 5 BASIC20.32■□□□□ 0.84
CX3CR1P49238 ARRDC2-202ENST00000379656 2528 ntTSL 2 BASIC20.32■□□□□ 0.84
CX3CR1P49238 PTRH1-205ENST00000423807 1570 ntTSL 2 BASIC20.32■□□□□ 0.84
CX3CR1P49238 ADGRB1-202ENST00000517894 6241 ntAPPRIS P1 TSL 5 BASIC20.32■□□□□ 0.84
CX3CR1P49238 FBXO7-206ENST00000452138 1535 ntTSL 2 BASIC20.32■□□□□ 0.84
CX3CR1P49238 NR2F6-201ENST00000291442 2404 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
CX3CR1P49238 BIN1-203ENST00000346226 2401 ntAPPRIS ALT2 TSL 1 (best) BASIC20.31■□□□□ 0.84
CX3CR1P49238 MED22-201ENST00000343730 1437 ntAPPRIS P4 TSL 1 (best) BASIC20.31■□□□□ 0.84
CX3CR1P49238 KRT18P60-201ENST00000312876 1297 ntBASIC20.31■□□□□ 0.84
CX3CR1P49238 AC104002.3-202ENST00000557170 1100 ntTSL 3 BASIC20.31■□□□□ 0.84
CX3CR1P49238 ATAD3A-203ENST00000378756 2492 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
CX3CR1P49238 DYRK3-203ENST00000367109 2163 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
CX3CR1P49238 HEXDC-202ENST00000337014 2285 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
CX3CR1P49238 FHL2-203ENST00000358129 1578 ntTSL 5 BASIC20.3■□□□□ 0.84
CX3CR1P49238 AC004812.2-201ENST00000611079 2094 ntBASIC20.3■□□□□ 0.84
CX3CR1P49238 FAM21EP-202ENST00000456967 2177 ntTSL 2 BASIC20.3■□□□□ 0.84
CX3CR1P49238 RSPO4-202ENST00000400634 722 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
CX3CR1P49238 TRIM52-AS1-202ENST00000507434 672 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
CX3CR1P49238 PPM1J-201ENST00000309276 1863 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
CX3CR1P49238 MMD-201ENST00000262065 2735 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
CX3CR1P49238 ATP13A2-215ENST00000617114 1723 ntTSL 5 BASIC20.3■□□□□ 0.84
CX3CR1P49238 TSEN54-201ENST00000333213 1944 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
CX3CR1P49238 ATP5A1-220ENST00000593152 2258 ntTSL 2 BASIC20.29■□□□□ 0.84
CX3CR1P49238 PRMT5-213ENST00000553897 1857 ntTSL 2 BASIC20.29■□□□□ 0.84
CX3CR1P49238 ADSSL1-202ENST00000332972 1969 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
CX3CR1P49238 SDF4-202ENST00000360001 1956 ntAPPRIS ALT2 TSL 1 (best) BASIC20.29■□□□□ 0.84
CX3CR1P49238 AL592295.1-201ENST00000400984 884 ntBASIC20.29■□□□□ 0.84
CX3CR1P49238 ABHD17AP5-201ENST00000580133 923 ntBASIC20.29■□□□□ 0.84
CX3CR1P49238 SLC35B2-204ENST00000537814 1715 ntTSL 2 BASIC20.29■□□□□ 0.84
CX3CR1P49238 HOMER3-201ENST00000221222 1384 ntAPPRIS ALT1 TSL 5 BASIC20.29■□□□□ 0.84
CX3CR1P49238 CUEDC1-202ENST00000407144 2190 ntAPPRIS P1 TSL 5 BASIC20.29■□□□□ 0.84
CX3CR1P49238 PPP1CC-206ENST00000550991 1882 ntTSL 2 BASIC20.28■□□□□ 0.84
CX3CR1P49238 P3H3-201ENST00000290510 2632 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
CX3CR1P49238 CACNA1H-202ENST00000358590 8069 ntAPPRIS ALT2 TSL 5 BASIC20.28■□□□□ 0.84
CX3CR1P49238 ERGIC1-202ENST00000393784 2881 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
CX3CR1P49238 SLC9A3-203ENST00000514375 2504 ntAPPRIS ALT2 TSL 1 (best) BASIC20.28■□□□□ 0.84
CX3CR1P49238 HMG20B-202ENST00000333651 1596 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
CX3CR1P49238 MAP2K2-201ENST00000262948 1734 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
CX3CR1P49238 ZDHHC14-204ENST00000414563 3134 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
CX3CR1P49238 AMZ2P1-201ENST00000397713 2259 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
CX3CR1P49238 OXLD1-201ENST00000374741 620 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
CX3CR1P49238 PTCH1-210ENST00000468211 1254 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
CX3CR1P49238 TCEA1-213ENST00000640041 1171 ntTSL 5 BASIC20.27■□□□□ 0.84
CX3CR1P49238 REPS2-202ENST00000357277 7953 ntAPPRIS P3 TSL 1 (best) BASIC20.27■□□□□ 0.84
CX3CR1P49238 NR6A1-201ENST00000344523 1846 ntAPPRIS ALT2 TSL 5 BASIC20.27■□□□□ 0.84
CX3CR1P49238 CNN3-202ENST00000394202 1974 ntTSL 2 BASIC20.26■□□□□ 0.83
CX3CR1P49238 C20orf24-203ENST00000373852 1059 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
CX3CR1P49238 C17orf49-201ENST00000439424 850 ntAPPRIS P3 TSL 1 (best) BASIC20.26■□□□□ 0.83
CX3CR1P49238 AC090877.2-201ENST00000558441 1738 ntBASIC20.26■□□□□ 0.83
CX3CR1P49238 GNB1-210ENST00000615252 3048 ntTSL 5 BASIC20.26■□□□□ 0.83
CX3CR1P49238 KCNQ5-208ENST00000414165 6236 ntTSL 5 BASIC20.26■□□□□ 0.83
CX3CR1P49238 ABHD17B-202ENST00000377041 1312 ntAPPRIS P4 TSL 1 (best) BASIC20.26■□□□□ 0.83
CX3CR1P49238 C1QL2-201ENST00000272520 2043 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
CX3CR1P49238 AC012676.1-201ENST00000574705 1949 ntBASIC20.25■□□□□ 0.83
CX3CR1P49238 PPP2R2C-203ENST00000382599 1807 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
CX3CR1P49238 CKB-201ENST00000348956 1709 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
CX3CR1P49238 SHD-204ENST00000599689 1729 ntTSL 5 BASIC20.25■□□□□ 0.83
CX3CR1P49238 ADAM22-209ENST00000439864 2576 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
CX3CR1P49238 SUGCT-201ENST00000335693 1645 ntAPPRIS ALT2 TSL 1 (best) BASIC20.25■□□□□ 0.83
CX3CR1P49238 FJX1-201ENST00000317811 2450 ntAPPRIS P1 BASIC20.25■□□□□ 0.83
CX3CR1P49238 HYI-210ENST00000486909 905 ntTSL 5 BASIC20.25■□□□□ 0.83
CX3CR1P49238 FAHD1-203ENST00000427358 1974 ntAPPRIS P1 BASIC20.25■□□□□ 0.83
CX3CR1P49238 LINC01578-209ENST00000557682 2683 ntTSL 2 BASIC20.24■□□□□ 0.83
CX3CR1P49238 CTSF-201ENST00000310325 2035 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
CX3CR1P49238 ZNF444-211ENST00000592949 1906 ntAPPRIS ALT2 TSL 1 (best) BASIC20.24■□□□□ 0.83
CX3CR1P49238 LONRF2P2-201ENST00000439212 571 ntBASIC20.24■□□□□ 0.83
CX3CR1P49238 FXYD7-204ENST00000588265 636 ntTSL 2 BASIC20.24■□□□□ 0.83
CX3CR1P49238 NTF6A-201ENST00000591175 560 ntBASIC20.24■□□□□ 0.83
CX3CR1P49238 LINC02043-201ENST00000419745 1832 ntTSL 2 BASIC20.24■□□□□ 0.83
CX3CR1P49238 ABCB10P4-201ENST00000566803 2184 ntBASIC20.24■□□□□ 0.83
CX3CR1P49238 SLC25A1-202ENST00000451283 1514 ntTSL 2 BASIC20.23■□□□□ 0.83
CX3CR1P49238 ADPRHL2-201ENST00000373178 1668 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
CX3CR1P49238 VDAC2-203ENST00000332211 1557 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
CX3CR1P49238 ROR1-202ENST00000371080 2305 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
CX3CR1P49238 SMKR1-201ENST00000462322 1035 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
CX3CR1P49238 SSSCA1-AS1-201ENST00000567594 614 ntBASIC20.23■□□□□ 0.83
CX3CR1P49238 MXRA7-201ENST00000355797 5661 ntAPPRIS P4 TSL 2 BASIC20.23■□□□□ 0.83
CX3CR1P49238 FAM83F-202ENST00000473717 1917 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
CX3CR1P49238 AC091230.1-202ENST00000564823 5356 ntTSL 2 BASIC20.23■□□□□ 0.83
CX3CR1P49238 SNX10-207ENST00000446848 2613 ntAPPRIS P2 TSL 1 (best) BASIC20.23■□□□□ 0.83
CX3CR1P49238 TMUB1-203ENST00000462940 1549 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
CX3CR1P49238 NPEPL1-201ENST00000356091 2378 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
CX3CR1P49238 CSNK1G3-207ENST00000512718 1569 ntTSL 2 BASIC20.22■□□□□ 0.83
CX3CR1P49238 MYDGF-201ENST00000262947 1018 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Retrieved 100 of 98,524 protein–RNA pairs in 22.9 ms