Protein–RNA interactions for Protein: P45973

CBX5, Chromobox protein homolog 5, humanhuman

Predictions only

Length 191 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CBX5P45973 PHC2-202ENST00000373418 2550 ntAPPRIS ALT2 TSL 1 (best) BASIC19.85■□□□□ 0.77
CBX5P45973 CBARP-202ENST00000382477 2453 ntAPPRIS ALT2 TSL 5 BASIC19.84■□□□□ 0.77
CBX5P45973 SMOX-201ENST00000278795 2164 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
CBX5P45973 CPNE2-202ENST00000535318 2316 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
CBX5P45973 PDF-201ENST00000288022 1158 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
CBX5P45973 ITPKC-201ENST00000263370 3385 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
CBX5P45973 NKX6-3-202ENST00000524115 1683 ntTSL 2 BASIC19.84■□□□□ 0.77
CBX5P45973 AC078883.1-202ENST00000450443 1397 ntTSL 3 BASIC19.83■□□□□ 0.77
CBX5P45973 CDH23-206ENST00000398842 1759 ntTSL 5 BASIC19.83■□□□□ 0.77
CBX5P45973 PVT1-212ENST00000521951 1535 ntTSL 1 (best) BASIC19.83■□□□□ 0.77
CBX5P45973 SOBP-201ENST00000317357 5245 ntAPPRIS P1 TSL 5 BASIC19.83■□□□□ 0.77
CBX5P45973 MOGS-202ENST00000409065 2668 ntTSL 5 BASIC19.83■□□□□ 0.76
CBX5P45973 LSR-205ENST00000427250 1606 ntTSL 2 BASIC19.83■□□□□ 0.76
CBX5P45973 CEBPD-201ENST00000408965 2178 ntAPPRIS P1 BASIC19.83■□□□□ 0.76
CBX5P45973 TMC7-205ENST00000569532 2738 ntTSL 2 BASIC19.82■□□□□ 0.76
CBX5P45973 KCNJ12-202ENST00000583088 5425 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
CBX5P45973 ANO8-204ENST00000630631 1905 ntTSL 5 BASIC19.82■□□□□ 0.76
CBX5P45973 IRX5-201ENST00000320990 2061 ntAPPRIS ALT1 TSL 1 (best) BASIC19.82■□□□□ 0.76
CBX5P45973 CCSER2-202ENST00000359979 2066 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
CBX5P45973 NPHS2-202ENST00000367616 1670 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
CBX5P45973 CAPNS1-217ENST00000629983 799 ntTSL 5 BASIC19.82■□□□□ 0.76
CBX5P45973 AC004812.2-201ENST00000611079 2094 ntBASIC19.82■□□□□ 0.76
CBX5P45973 PPP1R12C-201ENST00000263433 2924 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
CBX5P45973 PITX2-209ENST00000557119 1889 ntTSL 2 BASIC19.82■□□□□ 0.76
CBX5P45973 TPRN-202ENST00000409012 2718 ntAPPRIS P2 TSL 1 (best) BASIC19.82■□□□□ 0.76
CBX5P45973 PRSS56-201ENST00000449534 2157 ntAPPRIS ALT2 TSL 5 BASIC19.81■□□□□ 0.76
CBX5P45973 PRSS56-203ENST00000617714 2158 ntAPPRIS P2 TSL 5 BASIC19.81■□□□□ 0.76
CBX5P45973 VGF-202ENST00000445482 2477 ntAPPRIS P1 TSL 5 BASIC19.81■□□□□ 0.76
CBX5P45973 TMEFF1-201ENST00000374879 2611 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
CBX5P45973 HEXDC-202ENST00000337014 2285 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
CBX5P45973 RYK-208ENST00000620660 2942 ntAPPRIS P3 TSL 1 (best) BASIC19.81■□□□□ 0.76
CBX5P45973 RYK-209ENST00000623711 2934 ntAPPRIS ALT2 TSL 1 (best) BASIC19.81■□□□□ 0.76
CBX5P45973 TRIM3-214ENST00000536344 2704 ntTSL 2 BASIC19.81■□□□□ 0.76
CBX5P45973 FIZ1-201ENST00000221665 2660 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
CBX5P45973 MGEA5-205ENST00000439817 5043 ntTSL 5 BASIC19.81■□□□□ 0.76
CBX5P45973 HOMER2-201ENST00000304231 1990 ntAPPRIS P4 TSL 5 BASIC19.81■□□□□ 0.76
CBX5P45973 NHLRC4-202ENST00000540585 2071 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
CBX5P45973 RNF223-201ENST00000453464 1902 ntAPPRIS P1 TSL 2 BASIC19.8■□□□□ 0.76
CBX5P45973 PQLC3-204ENST00000441908 1784 ntTSL 2 BASIC19.8■□□□□ 0.76
CBX5P45973 POTEF-201ENST00000361163 1586 ntTSL 5 BASIC19.8■□□□□ 0.76
CBX5P45973 ING2-201ENST00000302327 1189 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
CBX5P45973 AGPS-202ENST00000409888 815 ntTSL 4 BASIC19.8■□□□□ 0.76
CBX5P45973 CCSAP-203ENST00000366687 5089 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
CBX5P45973 HTRA2-201ENST00000258080 2370 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
CBX5P45973 CDK2AP1-201ENST00000261692 1625 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
CBX5P45973 AGAP1-205ENST00000409538 6138 ntTSL 5 BASIC19.79■□□□□ 0.76
CBX5P45973 RNF165-205ENST00000588679 2904 ntBASIC19.79■□□□□ 0.76
CBX5P45973 RANBP10-206ENST00000602677 2374 ntTSL 5 BASIC19.79■□□□□ 0.76
CBX5P45973 PLEKHO1-202ENST00000369126 1809 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
CBX5P45973 SCYL2-201ENST00000360820 5779 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
CBX5P45973 CTDP1-208ENST00000613122 5866 ntAPPRIS P3 TSL 1 (best) BASIC19.79■□□□□ 0.76
CBX5P45973 FAM120A-201ENST00000277165 5118 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
CBX5P45973 SLAIN1-206ENST00000418532 2855 ntAPPRIS ALT2 TSL 5 BASIC19.79■□□□□ 0.76
CBX5P45973 LRRC14-201ENST00000292524 5328 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
CBX5P45973 MAP3K3-201ENST00000361357 4818 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
CBX5P45973 C16orf87-201ENST00000285697 1585 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
CBX5P45973 PHOX2B-201ENST00000226382 3030 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
CBX5P45973 RFC2-201ENST00000055077 1695 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
CBX5P45973 HABP4-201ENST00000375249 2615 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
CBX5P45973 PFN2-210ENST00000481767 1620 ntTSL 2 BASIC19.78■□□□□ 0.76
CBX5P45973 TRIM52-AS1-203ENST00000509252 529 ntTSL 3 BASIC19.78■□□□□ 0.76
CBX5P45973 LAPTM4B-203ENST00000521545 915 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
CBX5P45973 HAUS3-202ENST00000443786 2430 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
CBX5P45973 SHD-204ENST00000599689 1729 ntTSL 5 BASIC19.78■□□□□ 0.76
CBX5P45973 ZFAND4-205ENST00000374371 2283 ntTSL 5 BASIC19.78■□□□□ 0.76
CBX5P45973 FGF2-201ENST00000264498 6775 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
CBX5P45973 FBXW7-202ENST00000281708 4976 ntAPPRIS P4 TSL 1 (best) BASIC19.77■□□□□ 0.76
CBX5P45973 PLEK2-201ENST00000216446 1549 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
CBX5P45973 DAZAP1-201ENST00000233078 2160 ntAPPRIS P2 TSL 1 (best) BASIC19.77■□□□□ 0.76
CBX5P45973 SLC39A4-202ENST00000301305 2174 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
CBX5P45973 CCNJL-201ENST00000257536 1848 ntAPPRIS P1 TSL 2 BASIC19.77■□□□□ 0.76
CBX5P45973 ST3GAL5-214ENST00000638178 2034 ntTSL 5 BASIC19.77■□□□□ 0.76
CBX5P45973 GADD45G-201ENST00000252506 1065 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
CBX5P45973 MDFIC-206ENST00000448022 484 ntTSL 2 BASIC19.77■□□□□ 0.76
CBX5P45973 PFN2-211ENST00000489155 636 ntTSL 4 BASIC19.77■□□□□ 0.76
CBX5P45973 DGAT1-201ENST00000332324 1473 ntTSL 5 BASIC19.77■□□□□ 0.76
CBX5P45973 IL15RA-214ENST00000525219 1850 ntAPPRIS ALT2 TSL 1 (best) BASIC19.77■□□□□ 0.76
CBX5P45973 RARA-201ENST00000254066 2414 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
CBX5P45973 CPOX-201ENST00000264193 2825 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
CBX5P45973 TMEM51-205ENST00000434578 1861 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
CBX5P45973 ARHGDIG-201ENST00000219409 949 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
CBX5P45973 LSM7-201ENST00000252622 529 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
CBX5P45973 ZNF706-207ENST00000519882 959 ntAPPRIS P1 TSL 3 BASIC19.76■□□□□ 0.75
CBX5P45973 ZNF706-213ENST00000521272 732 ntAPPRIS P1 TSL 5 BASIC19.76■□□□□ 0.75
CBX5P45973 KLC2-207ENST00000421552 2721 ntTSL 5 BASIC19.76■□□□□ 0.75
CBX5P45973 KEAP1-202ENST00000393623 2648 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
CBX5P45973 SCRT2-201ENST00000246104 3577 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
CBX5P45973 UBALD2-201ENST00000327490 1593 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
CBX5P45973 VEGFA-209ENST00000425836 1575 ntAPPRIS ALT2 TSL 1 (best) BASIC19.75■□□□□ 0.75
CBX5P45973 ERF-201ENST00000222329 2698 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
CBX5P45973 HOMEZ-201ENST00000357460 4971 ntAPPRIS P2 TSL 1 (best) BASIC19.75■□□□□ 0.75
CBX5P45973 COL15A1-201ENST00000375001 5496 ntAPPRIS P2 TSL 1 (best) BASIC19.75■□□□□ 0.75
CBX5P45973 TRAM2-AS1-201ENST00000453216 664 ntTSL 3 BASIC19.75■□□□□ 0.75
CBX5P45973 CLTA-207ENST00000470744 1102 ntTSL 2 BASIC19.75■□□□□ 0.75
CBX5P45973 AC096888.1-201ENST00000487097 565 ntTSL 4 BASIC19.75■□□□□ 0.75
CBX5P45973 ARFIP2-202ENST00000396777 1868 ntAPPRIS P1 TSL 2 BASIC19.75■□□□□ 0.75
CBX5P45973 GSN-204ENST00000373818 2657 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
CBX5P45973 PTH1R-207ENST00000449590 2123 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
CBX5P45973 HADH-209ENST00000603302 2032 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
CBX5P45973 LTB4R2-205ENST00000543919 1560 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Retrieved 100 of 98,524 protein–RNA pairs in 63.6 ms