Protein–RNA interactions for Protein: P42843

SKP2, F-box protein SKP2, yeast

Predictions only

Length 763 aa.

Protein		RNA				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	UniProt Accession	Gene	Ensembl Transcript ID	Length	Transcript Status	Prediction Score	Prediction z-Score	Detected Interaction
SKP2	P42843	SPO12	YHR152W	522 nt		5.86	□□□□□ -1.47
SKP2	P42843	RPB4	YJL140W	666 nt		5.86	□□□□□ -1.47
SKP2	P42843	APN1	YKL114C	1104 nt		5.86	□□□□□ -1.47
SKP2	P42843	FET3	YMR058W	1911 nt		5.86	□□□□□ -1.47
SKP2	P42843	YKR075C	YKR075C	924 nt		5.85	□□□□□ -1.47
SKP2	P42843	RCL1	YOL010W	1104 nt		5.85	□□□□□ -1.47
SKP2	P42843	YPR123C	YPR123C	435 nt		5.85	□□□□□ -1.47
SKP2	P42843	CSC1	YLR241W	2349 nt		5.85	□□□□□ -1.47
SKP2	P42843	YDR514C	YDR514C	1452 nt		5.84	□□□□□ -1.47
SKP2	P42843	CRZ1	YNL027W	2037 nt		5.84	□□□□□ -1.47
SKP2	P42843	PPM1	YDR435C	987 nt		5.84	□□□□□ -1.47
SKP2	P42843	SNZ3	YFL059W	897 nt		5.84	□□□□□ -1.47
SKP2	P42843	RAI1	YGL246C	1164 nt		5.84	□□□□□ -1.47
SKP2	P42843	MRPL25	YGR076C	474 nt		5.84	□□□□□ -1.47
SKP2	P42843	MRS1	YIR021W	1092 nt		5.84	□□□□□ -1.47
SKP2	P42843	KRE9	YJL174W	831 nt		5.84	□□□□□ -1.47
SKP2	P42843	CBF1	YJR060W	1056 nt		5.84	□□□□□ -1.47
SKP2	P42843	EFM3	YJR129C	1020 nt		5.84	□□□□□ -1.47
SKP2	P42843	SNZ2	YNL333W	897 nt		5.84	□□□□□ -1.47
SKP2	P42843	RER2	YBR002C	861 nt		5.84	□□□□□ -1.47
SKP2	P42843	NSI1	YDR026C	1713 nt		5.84	□□□□□ -1.47
SKP2	P42843	ACS1	YAL054C	2142 nt		5.84	□□□□□ -1.47
SKP2	P42843	RGD1	YBR260C	2001 nt		5.84	□□□□□ -1.48
SKP2	P42843	SKN1	YGR143W	2316 nt		5.83	□□□□□ -1.48
SKP2	P42843	RKM4	YDR257C	1485 nt		5.83	□□□□□ -1.48
SKP2	P42843	STL1	YDR536W	1710 nt		5.83	□□□□□ -1.48
SKP2	P42843	SMF2	YHR050W	1650 nt		5.83	□□□□□ -1.48
SKP2	P42843	SEM1	YDR363W-A	270 nt		5.83	□□□□□ -1.48
SKP2	P42843	VAM7	YGL212W	951 nt		5.83	□□□□□ -1.48
SKP2	P42843	PRP45	YAL032C	1140 nt		5.83	□□□□□ -1.48
SKP2	P42843	TAL1	YLR354C	1008 nt		5.83	□□□□□ -1.48
SKP2	P42843	YMR135W-A	YMR135W-A	534 nt		5.83	□□□□□ -1.48
SKP2	P42843	PPR1	YLR014C	2715 nt		5.83	□□□□□ -1.48
SKP2	P42843	STB5	YHR178W	2232 nt		5.83	□□□□□ -1.48
SKP2	P42843	YIL055C	YIL055C	1884 nt		5.82	□□□□□ -1.48
SKP2	P42843	SUA5	YGL169W	1281 nt		5.82	□□□□□ -1.48
SKP2	P42843	SCW4	YGR279C	1161 nt		5.82	□□□□□ -1.48
SKP2	P42843	BUD28	YLR062C	378 nt		5.82	□□□□□ -1.48
SKP2	P42843	MIM2	YLR099W-A	264 nt		5.82	□□□□□ -1.48
SKP2	P42843	YET2	YMR040W	483 nt		5.82	□□□□□ -1.48
SKP2	P42843	TAX4	YJL083W	1815 nt		5.82	□□□□□ -1.48
SKP2	P42843	IMG2	YCR071C	441 nt		5.81	□□□□□ -1.48
SKP2	P42843	UBC4	YBR082C	447 nt		5.81	□□□□□ -1.48
SKP2	P42843	GEP3	YOR205C	1671 nt		5.81	□□□□□ -1.48
SKP2	P42843	VHT1	YGR065C	1782 nt		5.8	□□□□□ -1.48
SKP2	P42843	YAP1	YML007W	1953 nt		5.8	□□□□□ -1.48
SKP2	P42843	ISR1	YPR106W	1332 nt		5.8	□□□□□ -1.48
SKP2	P42843	SPC97	YHR172W	2472 nt		5.8	□□□□□ -1.48
SKP2	P42843	PRE7	YBL041W	726 nt		5.8	□□□□□ -1.48
SKP2	P42843	MTF1	YMR228W	1026 nt		5.8	□□□□□ -1.48
SKP2	P42843	SCP1	YOR367W	603 nt		5.8	□□□□□ -1.48
SKP2	P42843	NUP1	YOR098C	3231 nt		5.8	□□□□□ -1.48
SKP2	P42843	PYC1	YGL062W	3537 nt		5.8	□□□□□ -1.48
SKP2	P42843	MLF3	YNL074C	1359 nt		5.8	□□□□□ -1.48
SKP2	P42843	TUL1	YKL034W	2277 nt		5.79	□□□□□ -1.48
SKP2	P42843	UPS3	YDR185C	540 nt		5.79	□□□□□ -1.48
SKP2	P42843	YIL060W	YIL060W	435 nt		5.79	□□□□□ -1.48
SKP2	P42843	PML1	YLR016C	615 nt		5.79	□□□□□ -1.48
SKP2	P42843	YMR105W-A	YMR105W-A	195 nt		5.79	□□□□□ -1.48
SKP2	P42843	RPC19	YNL113W	429 nt		5.79	□□□□□ -1.48
SKP2	P42843	YPR195C	YPR195C	330 nt		5.79	□□□□□ -1.48
SKP2	P42843	SAC6	YDR129C	1929 nt		5.78	□□□□□ -1.48
SKP2	P42843	HIR1	YBL008W	2523 nt		5.78	□□□□□ -1.48
SKP2	P42843	OAC1	YKL120W	975 nt		5.78	□□□□□ -1.48
SKP2	P42843	STE13	YOR219C	2796 nt		5.78	□□□□□ -1.48
SKP2	P42843	FLC3	YGL139W	2409 nt		5.78	□□□□□ -1.48
SKP2	P42843	UTP7	YER082C	1665 nt		5.78	□□□□□ -1.48
SKP2	P42843	CTS2	YDR371W	1536 nt		5.78	□□□□□ -1.48
SKP2	P42843	TUB2	YFL037W	1374 nt		5.78	□□□□□ -1.48
SKP2	P42843	TEF1	YPR080W	1377 nt		5.78	□□□□□ -1.48
SKP2	P42843	TEF2	YBR118W	1377 nt		5.78	□□□□□ -1.48
SKP2	P42843	MMR1	YLR190W	1476 nt		5.77	□□□□□ -1.49
SKP2	P42843	VPS5	YOR069W	2028 nt		5.77	□□□□□ -1.49
SKP2	P42843	WTM1	YOR230W	1314 nt		5.77	□□□□□ -1.49
SKP2	P42843	GFD1	YMR255W	567 nt		5.77	□□□□□ -1.49
SKP2	P42843	YOL035C	YOL035C	303 nt		5.77	□□□□□ -1.49
SKP2	P42843	MRP51	YPL118W	1035 nt		5.77	□□□□□ -1.49
SKP2	P42843	CTR1	YPR124W	1221 nt		5.77	□□□□□ -1.49
SKP2	P42843	QRI1	YDL103C	1434 nt		5.76	□□□□□ -1.49
SKP2	P42843	ARP10	YDR106W	855 nt		5.76	□□□□□ -1.49
SKP2	P42843	RPL7A	YGL076C	735 nt		5.76	□□□□□ -1.49
SKP2	P42843	RPL7B	YPL198W	735 nt		5.76	□□□□□ -1.49
SKP2	P42843	VAN1	YML115C	1608 nt		5.76	□□□□□ -1.49
SKP2	P42843	LPL1	YOR059C	1353 nt		5.76	□□□□□ -1.49
SKP2	P42843	ATG32	YIL146C	1590 nt		5.76	□□□□□ -1.49
SKP2	P42843	CLD1	YGR110W	1338 nt		5.75	□□□□□ -1.49
SKP2	P42843	RAM1	YDL090C	1296 nt		5.75	□□□□□ -1.49
SKP2	P42843	YEL028W	YEL028W	462 nt		5.75	□□□□□ -1.49
SKP2	P42843	YLH47	YPR125W	1365 nt		5.75	□□□□□ -1.49
SKP2	P42843	VPS4	YPR173C	1314 nt		5.74	□□□□□ -1.49
SKP2	P42843	YHP1	YDR451C	1062 nt		5.74	□□□□□ -1.49
SKP2	P42843	AAD6	YFL056C	639 nt		5.74	□□□□□ -1.49
SKP2	P42843	MAD2	YJL030W	591 nt		5.74	□□□□□ -1.49
SKP2	P42843	NCE103	YNL036W	666 nt		5.74	□□□□□ -1.49
SKP2	P42843	VMA4	YOR332W	702 nt		5.74	□□□□□ -1.49
SKP2	P42843	MID1	YNL291C	1647 nt		5.74	□□□□□ -1.49
SKP2	P42843	SPO77	YLR341W	1434 nt		5.74	□□□□□ -1.49
SKP2	P42843	DED81	YHR019C	1665 nt		5.73	□□□□□ -1.49
SKP2	P42843	RPN12	YFR052W	825 nt		5.73	□□□□□ -1.49
SKP2	P42843	BMT5	YIL096C	1011 nt		5.73	□□□□□ -1.49

Retrieved 100 of 7,029 protein–RNA pairs in 16.2 ms