RNA–Protein interactions for RNA: YDR435C

PPM1, Transcript of Carboxyl methyltransferase, yeastyeast

Gene PPM1, Length 987 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
PPM1YDR435C FAP1P53971 965 aa11.3□□□□□ -0.6
PPM1YDR435C PRY3P47033 881 aa10.69□□□□□ -0.7
PPM1YDR435C MTC1P47018 478 aaKnown RBP10.35□□□□□ -0.75
PPM1YDR435C YCK3P39962 524 aa10.01□□□□□ -0.81
PPM1YDR435C HAA1Q12753 694 aaKnown RBP9.89□□□□□ -0.83
PPM1YDR435C AAD16Q02895 342 aa9.79□□□□□ -0.84
PPM1YDR435C PRI1P10363 409 aa9.6□□□□□ -0.87
PPM1YDR435C SPA2P23201 1466 aaKnown RBP9.5□□□□□ -0.89
PPM1YDR435C DRS1P32892 752 aaKnown RBP9.4□□□□□ -0.9
PPM1YDR435C SGS1P35187 1447 aa9.37□□□□□ -0.91
PPM1YDR435C SSN2P38931 1420 aa9.27□□□□□ -0.93
PPM1YDR435C SKI3P17883 1432 aaKnown RBP9.13□□□□□ -0.95
PPM1YDR435C INO80P53115 1489 aa9.05□□□□□ -0.96
PPM1YDR435C TSR3Q12094 313 aaKnown RBP9□□□□□ -0.97
PPM1YDR435C NOP2P40991 618 aaKnown RBP8.94□□□□□ -0.98
PPM1YDR435C BUD31P25337 157 aaPredicted RBP8.91□□□□□ -0.98
PPM1YDR435C BFR2Q06631 534 aaKnown RBP8.88□□□□□ -0.99
PPM1YDR435C YGL015CP33199 130 aa8.83□□□□□ -1
PPM1YDR435C ISW2Q08773 1120 aa8.8□□□□□ -1
PPM1YDR435C RPG1P38249 964 aaKnown RBP8.79□□□□□ -1
PPM1YDR435C NSR1P27476 414 aaKnown RBP RIP-Chip data8.74□□□□□ -1.01not detected
PPM1YDR435C CHD1P32657 1468 aa8.71□□□□□ -1.01
PPM1YDR435C TFA1P36100 482 aa8.66□□□□□ -1.02
PPM1YDR435C TCB3Q03640 1545 aaKnown RBP8.65□□□□□ -1.02
PPM1YDR435C MMS22Q06164 1454 aa8.65□□□□□ -1.02
PPM1YDR435C MRPL32P25348 183 aa8.65□□□□□ -1.02
PPM1YDR435C XRN1P22147 1528 aaKnown RBP8.55□□□□□ -1.04
PPM1YDR435C UFD4P33202 1483 aa8.51□□□□□ -1.05
PPM1YDR435C TY1B-DR4Q07793 1604 aa8.47□□□□□ -1.05
PPM1YDR435C HSL1P34244 1518 aa8.44□□□□□ -1.06
PPM1YDR435C ENP1P38333 483 aaKnown RBP8.43□□□□□ -1.06
PPM1YDR435C SPP41P38904 1435 aa8.41□□□□□ -1.06
PPM1YDR435C SPT6P23615 1451 aaKnown RBP8.39□□□□□ -1.07
PPM1YDR435C THO2P53552 1597 aaKnown RBP8.38□□□□□ -1.07
PPM1YDR435C CAB3P36076 571 aa8.37□□□□□ -1.07
PPM1YDR435C IKI3Q06706 1349 aaKnown RBP8.36□□□□□ -1.07
PPM1YDR435C TRM732Q03496 1420 aa8.36□□□□□ -1.07
PPM1YDR435C HIR3P47171 1648 aa8.33□□□□□ -1.08
PPM1YDR435C SIS1P25294 352 aaKnown RBP8.33□□□□□ -1.08
PPM1YDR435C EBP2P36049 427 aaKnown RBP8.33□□□□□ -1.08
PPM1YDR435C SIN3P22579 1536 aa8.32□□□□□ -1.08
PPM1YDR435C RSE1Q04693 1361 aaKnown RBP8.32□□□□□ -1.08
PPM1YDR435C REV3P14284 1504 aa8.31□□□□□ -1.08
PPM1YDR435C STU1P38198 1513 aa8.31□□□□□ -1.08
PPM1YDR435C YTA7P40340 1379 aa8.3□□□□□ -1.08
PPM1YDR435C MON2P48563 1636 aaPredicted RBP8.29□□□□□ -1.08
PPM1YDR435C SSK2P53599 1579 aa8.29□□□□□ -1.08
PPM1YDR435C MYO2P19524 1574 aaKnown RBP8.28□□□□□ -1.08
PPM1YDR435C STH1P32597 1359 aa8.28□□□□□ -1.08
PPM1YDR435C POL5P39985 1022 aaKnown RBP8.28□□□□□ -1.08
PPM1YDR435C RQC2Q12532 1038 aaKnown RBP8.27□□□□□ -1.09
PPM1YDR435C SEC3P33332 1336 aaKnown RBP8.25□□□□□ -1.09
PPM1YDR435C TAF2P23255 1407 aa8.24□□□□□ -1.09
PPM1YDR435C SAS10Q12136 610 aaPredicted RBP8.24□□□□□ -1.09
PPM1YDR435C POL1P13382 1468 aa8.24□□□□□ -1.09
PPM1YDR435C NUP170P38181 1502 aa8.23□□□□□ -1.09
PPM1YDR435C ECM5Q03214 1411 aa8.2□□□□□ -1.1
PPM1YDR435C ESP1Q03018 1630 aa8.19□□□□□ -1.1
PPM1YDR435C DIP2Q12220 943 aaPredicted RBP8.18□□□□□ -1.1
PPM1YDR435C SPT7P35177 1332 aa8.16□□□□□ -1.1
PPM1YDR435C SSM4P40318 1319 aa8.16□□□□□ -1.1
PPM1YDR435C YPR148CQ06523 435 aa8.15□□□□□ -1.1
PPM1YDR435C BPT1P14772 1559 aa8.14□□□□□ -1.11
PPM1YDR435C SCC2Q04002 1493 aa8.14□□□□□ -1.11
PPM1YDR435C TAF7Q05021 590 aa8.14□□□□□ -1.11
PPM1YDR435C MYO4P32492 1471 aa8.13□□□□□ -1.11
PPM1YDR435C SMC4Q12267 1418 aa8.12□□□□□ -1.11
PPM1YDR435C PRS1P32895 427 aaKnown RBP8.11□□□□□ -1.11
PPM1YDR435C MLP2P40457 1679 aa8.09□□□□□ -1.11
PPM1YDR435C DNA2P38859 1522 aa8.07□□□□□ -1.12
PPM1YDR435C PAN1P32521 1480 aa8.06□□□□□ -1.12
PPM1YDR435C YOR1P53049 1477 aa8.05□□□□□ -1.12
PPM1YDR435C RTT106P40161 455 aa8.04□□□□□ -1.12
PPM1YDR435C PDR10P51533 1564 aa8.04□□□□□ -1.12
PPM1YDR435C PEP1P32319 1579 aa8.03□□□□□ -1.12
PPM1YDR435C YPK9Q12697 1472 aa8.03□□□□□ -1.12
PPM1YDR435C SWR1Q05471 1514 aa8.03□□□□□ -1.12
PPM1YDR435C BUD4P47136 1447 aa8.02□□□□□ -1.13
PPM1YDR435C RKR1Q04781 1562 aa8.01□□□□□ -1.13
PPM1YDR435C SNQ2P32568 1501 aaKnown RBP8.01□□□□□ -1.13
PPM1YDR435C SRB8P25648 1427 aa7.98□□□□□ -1.13
PPM1YDR435C TSC11P40061 1430 aa7.96□□□□□ -1.13
PPM1YDR435C CLC1P17891 233 aa7.96□□□□□ -1.14
PPM1YDR435C GEA1P47102 1408 aaPredicted RBP7.95□□□□□ -1.14
PPM1YDR435C YLR419WQ06698 1435 aaKnown RBP7.95□□□□□ -1.14
PPM1YDR435C IME2P32581 645 aa7.94□□□□□ -1.14
PPM1YDR435C TCB2P48231 1178 aa7.94□□□□□ -1.14
PPM1YDR435C YCF1P39109 1515 aaKnown RBP7.93□□□□□ -1.14
PPM1YDR435C MNN4P36044 1178 aa7.93□□□□□ -1.14
PPM1YDR435C UBP9P39967 754 aa7.93□□□□□ -1.14
PPM1YDR435C PDR15Q04182 1529 aaKnown RBP7.92□□□□□ -1.14
PPM1YDR435C KOG1P38873 1557 aa7.91□□□□□ -1.14
PPM1YDR435C REB1P21538 810 aa7.9□□□□□ -1.14
PPM1YDR435C SIS2P36024 562 aa7.9□□□□□ -1.14
PPM1YDR435C IFH1P39520 1085 aa7.89□□□□□ -1.15
PPM1YDR435C ATG2P53855 1592 aa7.88□□□□□ -1.15
PPM1YDR435C TOP2P06786 1428 aaKnown RBP7.87□□□□□ -1.15
PPM1YDR435C CFT1Q06632 1357 aaKnown RBP7.87□□□□□ -1.15
PPM1YDR435C LEU3P08638 886 aa7.87□□□□□ -1.15
PPM1YDR435C EAF7P53911 425 aaKnown RBP7.87□□□□□ -1.15
Retrieved 100 of 5,963 RNA–protein pairs in 7.8 ms