Protein–RNA interactions for Protein: P30926

CHRNB4, Neuronal acetylcholine receptor subunit beta-4, humanhuman

Predictions only

Length 498 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNB4P30926 PARD6B-202ENST00000396039 522 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
CHRNB4P30926 CHAC1-201ENST00000444189 1204 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
CHRNB4P30926 TMEM170A-206ENST00000569276 609 ntTSL 2 BASIC20.56■□□□□ 0.88
CHRNB4P30926 AC243829.1-202ENST00000618848 486 ntTSL 3 BASIC20.56■□□□□ 0.88
CHRNB4P30926 MROH6-202ENST00000524906 1794 ntAPPRIS ALT2 TSL 3 BASIC20.56■□□□□ 0.88
CHRNB4P30926 ZDHHC20-203ENST00000400590 1869 ntAPPRIS ALT2 TSL 5 BASIC20.56■□□□□ 0.88
CHRNB4P30926 TMEM55B-201ENST00000250489 1961 ntAPPRIS P3 TSL 1 (best) BASIC20.55■□□□□ 0.88
CHRNB4P30926 C9orf40-201ENST00000376854 2327 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
CHRNB4P30926 PIK3R2-207ENST00000617130 2187 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
CHRNB4P30926 DACT2-202ENST00000366796 2028 ntAPPRIS ALT2 TSL 1 (best) BASIC20.55■□□□□ 0.88
CHRNB4P30926 AL136162.1-201ENST00000607711 1078 ntBASIC20.55■□□□□ 0.88
CHRNB4P30926 AC092902.2-206ENST00000625484 846 ntTSL 5 BASIC20.55■□□□□ 0.88
CHRNB4P30926 PSMG1-201ENST00000331573 2154 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
CHRNB4P30926 MFSD7-202ENST00000347950 1599 ntTSL 2 BASIC20.55■□□□□ 0.88
CHRNB4P30926 TM9SF3-201ENST00000371142 6141 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
CHRNB4P30926 CEND1-201ENST00000330106 1649 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
CHRNB4P30926 PRICKLE4-201ENST00000394259 939 ntAPPRIS ALT2 TSL 5 BASIC20.54■□□□□ 0.88
CHRNB4P30926 TYROBP-203ENST00000544690 522 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
CHRNB4P30926 MAP3K5-201ENST00000359015 5197 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
CHRNB4P30926 MAPKAP1-207ENST00000394060 1586 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
CHRNB4P30926 CLK2-203ENST00000368361 2166 ntAPPRIS ALT1 TSL 1 (best) BASIC20.53■□□□□ 0.88
CHRNB4P30926 AC135279.3-201ENST00000610945 1311 ntBASIC20.53■□□□□ 0.88
CHRNB4P30926 IL20RA-202ENST00000367746 1244 ntTSL 2 BASIC20.53■□□□□ 0.88
CHRNB4P30926 FOXB2-201ENST00000376708 1299 ntAPPRIS P1 BASIC20.53■□□□□ 0.88
CHRNB4P30926 ZNF32-202ENST00000395797 1201 ntAPPRIS P1 TSL 2 BASIC20.53■□□□□ 0.88
CHRNB4P30926 HIST1H2AL-201ENST00000613174 393 ntAPPRIS P1 BASIC20.53■□□□□ 0.88
CHRNB4P30926 PEX26-202ENST00000399744 1672 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
CHRNB4P30926 ARMC10-205ENST00000428183 2445 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
CHRNB4P30926 FAM220A-206ENST00000616824 2211 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
CHRNB4P30926 TWF2-201ENST00000305533 1718 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
CHRNB4P30926 EHBP1L1-201ENST00000309295 5185 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
CHRNB4P30926 BTBD6-204ENST00000463376 2195 ntAPPRIS ALT2 TSL 2 BASIC20.52■□□□□ 0.88
CHRNB4P30926 AC019163.1-201ENST00000512634 610 ntTSL 2 BASIC20.52■□□□□ 0.88
CHRNB4P30926 AC018413.1-201ENST00000581996 1200 ntTSL 2 BASIC20.52■□□□□ 0.88
CHRNB4P30926 WFDC1-201ENST00000219454 1534 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.87
CHRNB4P30926 AC096887.2-201ENST00000623443 1957 ntBASIC20.52■□□□□ 0.87
CHRNB4P30926 ADGRA2-202ENST00000412232 5651 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
CHRNB4P30926 NREP-202ENST00000379671 2581 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
CHRNB4P30926 ANKS3-203ENST00000450067 2272 ntTSL 5 BASIC20.51■□□□□ 0.87
CHRNB4P30926 YWHAH-201ENST00000248975 1825 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
CHRNB4P30926 STEAP2-207ENST00000402625 1372 ntTSL 5 BASIC20.51■□□□□ 0.87
CHRNB4P30926 DHFR-203ENST00000505337 1719 ntAPPRIS P1 TSL 2 BASIC20.51■□□□□ 0.87
CHRNB4P30926 STMN4-201ENST00000265770 1250 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
CHRNB4P30926 AC105935.1-201ENST00000424174 422 ntTSL 3 BASIC20.51■□□□□ 0.87
CHRNB4P30926 AC004448.1-201ENST00000458332 883 ntBASIC20.51■□□□□ 0.87
CHRNB4P30926 SHISA9-205ENST00000639941 1135 ntAPPRIS ALT2 TSL 5 BASIC20.51■□□□□ 0.87
CHRNB4P30926 CHST13-201ENST00000319340 1789 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
CHRNB4P30926 TMEM179-204ENST00000556573 1430 ntAPPRIS P1 TSL 3 BASIC20.51■□□□□ 0.87
CHRNB4P30926 ZDHHC16-207ENST00000393760 2014 ntAPPRIS P4 TSL 1 (best) BASIC20.51■□□□□ 0.87
CHRNB4P30926 NDEL1-202ENST00000380025 2181 ntTSL 5 BASIC20.51■□□□□ 0.87
CHRNB4P30926 IKBKG-211ENST00000615874 1460 ntTSL 5 BASIC20.5■□□□□ 0.87
CHRNB4P30926 IKBKG-215ENST00000619941 1463 ntTSL 5 BASIC20.5■□□□□ 0.87
CHRNB4P30926 EPCAM-201ENST00000263735 1724 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
CHRNB4P30926 DHRS13-202ENST00000394901 2037 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
CHRNB4P30926 C1QTNF12-201ENST00000330388 1036 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
CHRNB4P30926 EDA-201ENST00000338901 1233 ntBASIC20.5■□□□□ 0.87
CHRNB4P30926 LYPD2-201ENST00000359228 594 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
CHRNB4P30926 RASSF5-204ENST00000580449 1932 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
CHRNB4P30926 SLIT1-203ENST00000371041 1695 ntTSL 2 BASIC20.5■□□□□ 0.87
CHRNB4P30926 C6orf89-201ENST00000355190 1309 ntAPPRIS P3 TSL 1 (best) BASIC20.5■□□□□ 0.87
CHRNB4P30926 CCDC166-201ENST00000542437 1320 ntAPPRIS P1 TSL 2 BASIC20.5■□□□□ 0.87
CHRNB4P30926 MAGI2-208ENST00000522391 4878 ntAPPRIS ALT2 TSL 5 BASIC20.49■□□□□ 0.87
CHRNB4P30926 DNMT3A-206ENST00000406659 1775 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
CHRNB4P30926 ZNF747-203ENST00000568028 1511 ntAPPRIS P1 TSL 2 BASIC20.49■□□□□ 0.87
CHRNB4P30926 NPHS2-202ENST00000367616 1670 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
CHRNB4P30926 WIPI2-204ENST00000404704 1663 ntTSL 5 BASIC20.49■□□□□ 0.87
CHRNB4P30926 BTBD6-205ENST00000536364 1973 ntAPPRIS P2 TSL 5 BASIC20.49■□□□□ 0.87
CHRNB4P30926 P2RX2-202ENST00000348800 1222 ntAPPRIS ALT2 TSL 1 (best) BASIC20.49■□□□□ 0.87
CHRNB4P30926 P2RX2-204ENST00000351222 1140 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
CHRNB4P30926 ZNRF2P3-201ENST00000424200 374 ntBASIC20.49■□□□□ 0.87
CHRNB4P30926 P2RX2-207ENST00000449132 1113 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
CHRNB4P30926 CDKN2A-206ENST00000494262 989 ntTSL 3 BASIC20.49■□□□□ 0.87
CHRNB4P30926 KRTAP5-4-202ENST00000616115 660 ntAPPRIS ALT2 TSL 5 BASIC20.49■□□□□ 0.87
CHRNB4P30926 SAC3D1-201ENST00000398846 1566 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
CHRNB4P30926 C7orf25-205ENST00000438029 1743 ntAPPRIS P1 TSL 2 BASIC20.49■□□□□ 0.87
CHRNB4P30926 ANKS6-201ENST00000353234 7164 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
CHRNB4P30926 TRIM14-203ENST00000375098 1792 ntAPPRIS P1 TSL 2 BASIC20.49■□□□□ 0.87
CHRNB4P30926 RCE1-202ENST00000524506 1379 ntTSL 5 BASIC20.48■□□□□ 0.87
CHRNB4P30926 CKB-201ENST00000348956 1709 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
CHRNB4P30926 GFRA4-201ENST00000290417 1427 ntAPPRIS ALT2 TSL 1 (best) BASIC20.48■□□□□ 0.87
CHRNB4P30926 CDKN2D-201ENST00000335766 1086 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
CHRNB4P30926 CLPSL2-201ENST00000360454 488 ntAPPRIS ALT2 TSL 1 (best) BASIC20.48■□□□□ 0.87
CHRNB4P30926 AL359317.1-201ENST00000556316 578 ntTSL 4 BASIC20.48■□□□□ 0.87
CHRNB4P30926 AL355001.2-201ENST00000620617 1191 ntBASIC20.48■□□□□ 0.87
CHRNB4P30926 RRNAD1-201ENST00000368216 2254 ntAPPRIS P3 TSL 1 (best) BASIC20.48■□□□□ 0.87
CHRNB4P30926 SLC30A5-201ENST00000380860 1317 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
CHRNB4P30926 AC005703.6-201ENST00000623265 1329 ntBASIC20.48■□□□□ 0.87
CHRNB4P30926 GATM-206ENST00000558336 1522 ntTSL 2 BASIC20.48■□□□□ 0.87
CHRNB4P30926 SERF1A-202ENST00000354833 1889 ntTSL 1 (best) BASIC20.47■□□□□ 0.87
CHRNB4P30926 SERF1B-201ENST00000380750 1889 ntTSL 1 (best) BASIC20.47■□□□□ 0.87
CHRNB4P30926 LINC00588-201ENST00000521663 1875 ntTSL 2 BASIC20.47■□□□□ 0.87
CHRNB4P30926 TANGO2-214ENST00000447208 2086 ntTSL 3 BASIC20.47■□□□□ 0.87
CHRNB4P30926 ERN1-208ENST00000606895 2068 ntBASIC20.47■□□□□ 0.87
CHRNB4P30926 EVA1C-201ENST00000300255 1998 ntAPPRIS P3 TSL 1 (best) BASIC20.47■□□□□ 0.87
CHRNB4P30926 EIF6-201ENST00000374436 1252 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
CHRNB4P30926 AL355987.3-201ENST00000456614 735 ntAPPRIS P1 TSL 4 BASIC20.47■□□□□ 0.87
CHRNB4P30926 SMIM29-205ENST00000468145 903 ntTSL 2 BASIC20.47■□□□□ 0.87
CHRNB4P30926 SMIM29-207ENST00000481533 1053 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
CHRNB4P30926 SMARCA5-AS1-201ENST00000500800 945 ntTSL 1 (best) BASIC20.47■□□□□ 0.87
CHRNB4P30926 SUDS3P1-201ENST00000505831 966 ntBASIC20.47■□□□□ 0.87
Retrieved 100 of 98,524 protein–RNA pairs in 15.1 ms