Protein–RNA interactions for Protein: P25942

CD40, Tumor necrosis factor receptor superfamily member 5, humanhuman

Predictions only

Length 277 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CD40P25942 AC119427.1-201ENST00000633182 556 ntTSL 4 BASIC20.1■□□□□ 0.81
CD40P25942 CRIM1-201ENST00000280527 5912 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
CD40P25942 GPS1-204ENST00000392358 2276 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
CD40P25942 WIPI2-202ENST00000382384 1948 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
CD40P25942 SMOX-203ENST00000339123 2074 ntTSL 1 (best) BASIC20.09■□□□□ 0.81
CD40P25942 IQANK1-201ENST00000527139 1803 ntAPPRIS P1 TSL 5 BASIC20.09■□□□□ 0.81
CD40P25942 CREM-210ENST00000374721 2020 ntTSL 5 BASIC20.09■□□□□ 0.81
CD40P25942 ST3GAL5-214ENST00000638178 2034 ntTSL 5 BASIC20.09■□□□□ 0.81
CD40P25942 MFSD5-201ENST00000329548 1760 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
CD40P25942 PCYT2-202ENST00000538721 1765 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
CD40P25942 PEMT-201ENST00000255389 1013 ntTSL 1 (best) BASIC20.09■□□□□ 0.81
CD40P25942 ZNF419-210ENST00000520540 568 ntTSL 4 BASIC20.09■□□□□ 0.81
CD40P25942 SNX5-217ENST00000606557 1087 ntBASIC20.09■□□□□ 0.81
CD40P25942 FGF22-201ENST00000215530 1311 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
CD40P25942 LSM7-203ENST00000585409 512 ntTSL 2 BASIC20.08■□□□□ 0.81
CD40P25942 SLC16A10-206ENST00000612036 1231 ntTSL 5 BASIC20.08■□□□□ 0.81
CD40P25942 AHSA2-201ENST00000357022 2437 ntTSL 1 (best) BASIC20.08■□□□□ 0.8
CD40P25942 ATG16L2-205ENST00000534905 1614 ntTSL 1 (best) BASIC20.08■□□□□ 0.8
CD40P25942 C16orf72-201ENST00000327827 5953 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.8
CD40P25942 CADM4-201ENST00000222374 2178 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.8
CD40P25942 NR2F1-AS1-214ENST00000607831 1963 ntTSL 2 BASIC20.08■□□□□ 0.8
CD40P25942 CKB-201ENST00000348956 1709 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
CD40P25942 FAM220A-206ENST00000616824 2211 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
CD40P25942 DCUN1D2-208ENST00000478244 2045 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
CD40P25942 AC008406.3-201ENST00000620001 1374 ntBASIC20.07■□□□□ 0.8
CD40P25942 C14orf80-204ENST00000392522 1630 ntAPPRIS P4 TSL 5 BASIC20.06■□□□□ 0.8
CD40P25942 RING1-201ENST00000374656 1752 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
CD40P25942 KREMEN2-205ENST00000575769 1922 ntAPPRIS ALT2 TSL 1 (best) BASIC20.06■□□□□ 0.8
CD40P25942 VDAC2-203ENST00000332211 1557 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
CD40P25942 ARHGAP29-202ENST00000370217 2043 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
CD40P25942 SUSD3-202ENST00000375472 1195 ntAPPRIS P3 TSL 1 (best) BASIC20.06■□□□□ 0.8
CD40P25942 CDKN2B-202ENST00000380142 859 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
CD40P25942 C7orf25-205ENST00000438029 1743 ntAPPRIS P1 TSL 2 BASIC20.06■□□□□ 0.8
CD40P25942 ARPC4-208ENST00000498623 942 ntTSL 2 BASIC20.06■□□□□ 0.8
CD40P25942 CAPZB-203ENST00000375142 1686 ntAPPRIS ALT1 TSL 5 BASIC20.06■□□□□ 0.8
CD40P25942 SNCB-201ENST00000310112 1383 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
CD40P25942 DSG2-201ENST00000261590 5831 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
CD40P25942 RABL6-202ENST00000357466 1820 ntAPPRIS ALT2 TSL 1 (best) BASIC20.05■□□□□ 0.8
CD40P25942 TRIM7-202ENST00000334421 1228 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
CD40P25942 CD72-202ENST00000378430 585 ntTSL 3 BASIC20.05■□□□□ 0.8
CD40P25942 MIR6722-201ENST00000617286 78 ntBASIC20.05■□□□□ 0.8
CD40P25942 AL117332.1-201ENST00000622628 974 ntBASIC20.05■□□□□ 0.8
CD40P25942 TMEM240-203ENST00000624426 796 ntTSL 3 BASIC20.05■□□□□ 0.8
CD40P25942 CRLF1-201ENST00000392386 1792 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
CD40P25942 COMMD5-201ENST00000305103 1373 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
CD40P25942 HOMER3-205ENST00000542541 1607 ntAPPRIS P3 TSL 1 (best) BASIC20.05■□□□□ 0.8
CD40P25942 MEIOB-203ENST00000412554 1884 ntAPPRIS P1 TSL 5 BASIC20.05■□□□□ 0.8
CD40P25942 PFKFB4-204ENST00000416568 1575 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
CD40P25942 FNTA-201ENST00000302279 1840 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
CD40P25942 CFAP99-207ENST00000635017 2298 ntTSL 5 BASIC20.04■□□□□ 0.8
CD40P25942 CD63-202ENST00000420846 981 ntAPPRIS P1 TSL 5 BASIC20.04■□□□□ 0.8
CD40P25942 CDKN2A-207ENST00000497750 565 ntTSL 4 BASIC20.04■□□□□ 0.8
CD40P25942 CDKN2A-212ENST00000578845 678 ntTSL 2 BASIC20.04■□□□□ 0.8
CD40P25942 PRSS21-201ENST00000005995 1101 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
CD40P25942 MIR663AHG-233ENST00000609248 830 ntTSL 5 BASIC20.04■□□□□ 0.8
CD40P25942 LINC01881-206ENST00000614114 957 ntTSL 2 BASIC20.04■□□□□ 0.8
CD40P25942 PCMT1-202ENST00000367380 1628 ntTSL 2 BASIC20.04■□□□□ 0.8
CD40P25942 LSR-205ENST00000427250 1606 ntTSL 2 BASIC20.04■□□□□ 0.8
CD40P25942 PCMT1-211ENST00000544496 1628 ntTSL 2 BASIC20.04■□□□□ 0.8
CD40P25942 STEAP2-207ENST00000402625 1372 ntTSL 5 BASIC20.04■□□□□ 0.8
CD40P25942 IKBKG-211ENST00000615874 1460 ntTSL 5 BASIC20.04■□□□□ 0.8
CD40P25942 IKBKG-215ENST00000619941 1463 ntTSL 5 BASIC20.04■□□□□ 0.8
CD40P25942 RFNG-201ENST00000310496 1828 ntAPPRIS P1 TSL 2 BASIC20.04■□□□□ 0.8
CD40P25942 AC012123.1-201ENST00000426194 1661 ntTSL 5 BASIC20.03■□□□□ 0.8
CD40P25942 RAB33A-201ENST00000257017 1258 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
CD40P25942 SRR-208ENST00000576848 588 ntTSL 4 BASIC20.03■□□□□ 0.8
CD40P25942 MIR3621-201ENST00000580529 85 ntBASIC20.03■□□□□ 0.8
CD40P25942 AL356740.2-201ENST00000601559 647 ntBASIC20.03■□□□□ 0.8
CD40P25942 CNN3-202ENST00000394202 1974 ntTSL 2 BASIC20.03■□□□□ 0.8
CD40P25942 ZNF219-201ENST00000360947 3071 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
CD40P25942 SLC35B2-202ENST00000393812 2043 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
CD40P25942 RPP21-222ENST00000433076 577 ntTSL 2 BASIC20.02■□□□□ 0.8
CD40P25942 AC004540.2-202ENST00000451264 508 ntTSL 2 BASIC20.02■□□□□ 0.8
CD40P25942 AC004448.1-201ENST00000458332 883 ntBASIC20.02■□□□□ 0.8
CD40P25942 TRIR-202ENST00000588213 841 ntTSL 3 BASIC20.02■□□□□ 0.8
CD40P25942 FBXW5-201ENST00000325285 2274 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
CD40P25942 DYRK2-203ENST00000393555 2209 ntAPPRIS ALT1 TSL 1 (best) BASIC20.02■□□□□ 0.79
CD40P25942 SP5-201ENST00000375281 2033 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.79
CD40P25942 UBTD1-201ENST00000370664 1706 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.79
CD40P25942 CCND3-203ENST00000372991 2085 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
CD40P25942 C7orf49-203ENST00000430372 1579 ntTSL 5 BASIC20.01■□□□□ 0.79
CD40P25942 PNCK-215ENST00000447676 1585 ntTSL 2 BASIC20.01■□□□□ 0.79
CD40P25942 ADRM1-205ENST00000620230 1361 ntTSL 5 BASIC20.01■□□□□ 0.79
CD40P25942 SPAG16-201ENST00000272898 1059 ntTSL 5 BASIC20.01■□□□□ 0.79
CD40P25942 C4orf36-201ENST00000295898 881 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
CD40P25942 TFPT-201ENST00000391757 774 ntTSL 5 BASIC20.01■□□□□ 0.79
CD40P25942 TFPT-202ENST00000391758 804 ntAPPRIS ALT2 TSL 1 (best) BASIC20.01■□□□□ 0.79
CD40P25942 ERRFI1-203ENST00000469499 995 ntTSL 3 BASIC20.01■□□□□ 0.79
CD40P25942 ERGIC1-206ENST00000519860 1000 ntTSL 3 BASIC20.01■□□□□ 0.79
CD40P25942 TMEM170A-206ENST00000569276 609 ntTSL 2 BASIC20.01■□□□□ 0.79
CD40P25942 PTOV1-201ENST00000391842 1875 ntAPPRIS P1 TSL 5 BASIC20.01■□□□□ 0.79
CD40P25942 KCNMA1-283ENST00000640523 5425 ntAPPRIS ALT2 TSL 5 BASIC20■□□□□ 0.79
CD40P25942 AK3-203ENST00000447596 705 ntTSL 2 BASIC20■□□□□ 0.79
CD40P25942 CLTA-206ENST00000466396 695 ntTSL 2 BASIC20■□□□□ 0.79
CD40P25942 SLC25A39-203ENST00000537904 1274 ntTSL 2 BASIC20■□□□□ 0.79
CD40P25942 SCTR-201ENST00000019103 1865 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
CD40P25942 ZNF365-206ENST00000395255 1674 ntTSL 1 (best) BASIC20■□□□□ 0.79
CD40P25942 AL117336.3-202ENST00000605499 489 ntTSL 3 BASIC19.99■□□□□ 0.79
CD40P25942 AC243829.1-202ENST00000618848 486 ntTSL 3 BASIC19.99■□□□□ 0.79
CD40P25942 ARHGEF35-201ENST00000378115 2431 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
Retrieved 100 of 98,524 protein–RNA pairs in 12.7 ms