Protein–RNA interactions for Protein: P12838

DEFA4, Neutrophil defensin 4, humanhuman

Predictions only

Length 97 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DEFA4P12838 FLVCR1-201ENST00000366971 5939 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
DEFA4P12838 TMEM120A-214ENST00000493111 1456 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
DEFA4P12838 DENND1A-201ENST00000373618 3003 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
DEFA4P12838 TMEM104-205ENST00000582773 1740 ntTSL 2 BASIC18.72■□□□□ 0.59
DEFA4P12838 IL15RA-214ENST00000525219 1850 ntAPPRIS ALT2 TSL 1 (best) BASIC18.72■□□□□ 0.59
DEFA4P12838 PKMYT1-211ENST00000573944 1891 ntAPPRIS P1 TSL 5 BASIC18.72■□□□□ 0.59
DEFA4P12838 RAP2CP1-202ENST00000605179 643 ntBASIC18.72■□□□□ 0.59
DEFA4P12838 FGF2-201ENST00000264498 6775 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
DEFA4P12838 ARX-201ENST00000379044 2876 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
DEFA4P12838 HORMAD2-201ENST00000336726 2187 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
DEFA4P12838 AMZ2-202ENST00000359904 2402 ntAPPRIS P1 TSL 2 BASIC18.72■□□□□ 0.59
DEFA4P12838 BBC3-203ENST00000439096 1838 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
DEFA4P12838 RASL10A-201ENST00000216101 1490 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
DEFA4P12838 GGH-201ENST00000260118 1607 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
DEFA4P12838 ARG2-201ENST00000261783 2045 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
DEFA4P12838 FAM21EP-202ENST00000456967 2177 ntTSL 2 BASIC18.71■□□□□ 0.59
DEFA4P12838 CCDC96-201ENST00000310085 2091 ntAPPRIS P1 BASIC18.71■□□□□ 0.59
DEFA4P12838 AC133552.2-201ENST00000619106 1032 ntBASIC18.71■□□□□ 0.59
DEFA4P12838 R3HDM4-201ENST00000361574 1815 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
DEFA4P12838 AC105219.1-201ENST00000531565 1963 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
DEFA4P12838 MSX2-201ENST00000239243 2241 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
DEFA4P12838 HOXD1-201ENST00000331462 1975 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
DEFA4P12838 YAP1-202ENST00000345877 5284 ntTSL 5 BASIC18.7■□□□□ 0.58
DEFA4P12838 RBFA-201ENST00000262197 1219 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
DEFA4P12838 AC016910.1-201ENST00000422799 1046 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
DEFA4P12838 EED-207ENST00000528180 1745 ntTSL 5 BASIC18.7■□□□□ 0.58
DEFA4P12838 PITX3-202ENST00000539804 1187 ntAPPRIS P1 TSL 5 BASIC18.7■□□□□ 0.58
DEFA4P12838 SLC22A31-206ENST00000614943 1860 ntTSL 5 BASIC18.7■□□□□ 0.58
DEFA4P12838 SYNDIG1-201ENST00000376862 2522 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
DEFA4P12838 HEXDC-202ENST00000337014 2285 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
DEFA4P12838 NKX2-3-202ENST00000622383 1986 ntTSL 5 BASIC18.7■□□□□ 0.58
DEFA4P12838 MRGBP-201ENST00000370487 2781 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
DEFA4P12838 PTOV1-201ENST00000391842 1875 ntAPPRIS P1 TSL 5 BASIC18.69■□□□□ 0.58
DEFA4P12838 RANBP10-206ENST00000602677 2374 ntTSL 5 BASIC18.69■□□□□ 0.58
DEFA4P12838 RCCD1-206ENST00000556618 1556 ntAPPRIS P2 TSL 5 BASIC18.69■□□□□ 0.58
DEFA4P12838 ST3GAL5-269ENST00000640992 2292 ntAPPRIS ALT2 TSL 5 BASIC18.69■□□□□ 0.58
DEFA4P12838 SKI-201ENST00000378536 5613 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
DEFA4P12838 SMOX-201ENST00000278795 2164 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
DEFA4P12838 DACT3-201ENST00000300875 2526 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
DEFA4P12838 AL137002.2-201ENST00000639766 2238 ntTSL 5 BASIC18.69■□□□□ 0.58
DEFA4P12838 ZFP91-CNTF-201ENST00000389919 2319 ntAPPRIS P5 TSL 2 BASIC18.68■□□□□ 0.58
DEFA4P12838 CEBPD-201ENST00000408965 2178 ntAPPRIS P1 BASIC18.68■□□□□ 0.58
DEFA4P12838 CPSF4-207ENST00000451876 1644 ntTSL 5 BASIC18.68■□□□□ 0.58
DEFA4P12838 SYT7-202ENST00000535826 1621 ntTSL 5 BASIC18.68■□□□□ 0.58
DEFA4P12838 TNFSF12-TNFSF13-201ENST00000293826 1816 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
DEFA4P12838 NTHL1-201ENST00000219066 1067 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
DEFA4P12838 ENDOG-201ENST00000372642 1172 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
DEFA4P12838 BTBD6-205ENST00000536364 1973 ntAPPRIS P2 TSL 5 BASIC18.68■□□□□ 0.58
DEFA4P12838 C16orf87-201ENST00000285697 1585 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
DEFA4P12838 SAC3D1-201ENST00000398846 1566 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
DEFA4P12838 AKT1-201ENST00000349310 2866 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
DEFA4P12838 IQANK1-201ENST00000527139 1803 ntAPPRIS P1 TSL 5 BASIC18.67■□□□□ 0.58
DEFA4P12838 SLC6A10P-202ENST00000431994 2058 ntBASIC18.67■□□□□ 0.58
DEFA4P12838 AC012676.1-201ENST00000574705 1949 ntBASIC18.67■□□□□ 0.58
DEFA4P12838 ARID1B-220ENST00000636930 8246 ntAPPRIS ALT2 TSL 2 BASIC18.67■□□□□ 0.58
DEFA4P12838 PLEK2-201ENST00000216446 1549 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
DEFA4P12838 LSM8-203ENST00000422760 1920 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
DEFA4P12838 UBTD1-201ENST00000370664 1706 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
DEFA4P12838 SLC35B2-202ENST00000393812 2043 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
DEFA4P12838 IQCJ-SCHIP1-201ENST00000412423 2067 ntAPPRIS ALT2 TSL 1 (best) BASIC18.66■□□□□ 0.58
DEFA4P12838 CNR1-203ENST00000369501 6031 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
DEFA4P12838 AC138647.1-201ENST00000427937 648 ntAPPRIS P1 TSL 5 BASIC18.66■□□□□ 0.58
DEFA4P12838 AC009831.1-201ENST00000580420 1582 ntBASIC18.66■□□□□ 0.58
DEFA4P12838 PNCK-204ENST00000370150 1612 ntAPPRIS P1 TSL 5 BASIC18.66■□□□□ 0.58
DEFA4P12838 RABEP2-203ENST00000544477 1645 ntTSL 2 BASIC18.66■□□□□ 0.58
DEFA4P12838 ESYT2-201ENST00000251527 5960 ntAPPRIS P2 TSL 1 (best) BASIC18.66■□□□□ 0.58
DEFA4P12838 HSPBP1-201ENST00000255631 1768 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
DEFA4P12838 TRIM14-203ENST00000375098 1792 ntAPPRIS P1 TSL 2 BASIC18.65■□□□□ 0.58
DEFA4P12838 RRAS2-201ENST00000256196 1516 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
DEFA4P12838 CACTIN-AS1-201ENST00000592274 1913 ntTSL 2 BASIC18.65■□□□□ 0.58
DEFA4P12838 GNB2-203ENST00000393926 1641 ntAPPRIS P1 TSL 5 BASIC18.65■□□□□ 0.58
DEFA4P12838 RIPPLY2-202ENST00000369689 664 ntAPPRIS P2 TSL 1 (best) BASIC18.65■□□□□ 0.58
DEFA4P12838 BTBD19-201ENST00000409335 1214 ntTSL 5 BASIC18.65■□□□□ 0.58
DEFA4P12838 PTPA-210ENST00000414510 1153 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
DEFA4P12838 AP003733.4-201ENST00000623785 1697 ntBASIC18.65■□□□□ 0.58
DEFA4P12838 SLC39A2-201ENST00000298681 1379 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
DEFA4P12838 QKI-201ENST00000275262 6964 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
DEFA4P12838 HRH3-202ENST00000340177 2659 ntAPPRIS P2 TSL 1 (best) BASIC18.65■□□□□ 0.58
DEFA4P12838 CNNM1-201ENST00000356713 5959 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
DEFA4P12838 IL17RE-201ENST00000383814 2704 ntAPPRIS P2 TSL 1 (best) BASIC18.65■□□□□ 0.58
DEFA4P12838 WNT11-201ENST00000322563 1930 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.58
DEFA4P12838 SLC39A3-201ENST00000269740 1502 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.58
DEFA4P12838 GP1BB-201ENST00000366425 1553 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.58
DEFA4P12838 FNDC11-204ENST00000615526 2954 ntAPPRIS P1 BASIC18.64■□□□□ 0.57
DEFA4P12838 CHODL-201ENST00000299295 2548 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
DEFA4P12838 SDS-201ENST00000257549 1606 ntAPPRIS P1 TSL 2 BASIC18.64■□□□□ 0.57
DEFA4P12838 ANKLE2-201ENST00000357997 4646 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
DEFA4P12838 KLC1-201ENST00000246489 2294 ntAPPRIS P1 TSL 5 BASIC18.64■□□□□ 0.57
DEFA4P12838 KLC1-224ENST00000557450 2265 ntTSL 5 BASIC18.64■□□□□ 0.57
DEFA4P12838 CCR10-201ENST00000332438 1773 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
DEFA4P12838 RASGEF1B-211ENST00000514050 537 ntTSL 2 BASIC18.64■□□□□ 0.57
DEFA4P12838 NPW-202ENST00000566435 991 ntAPPRIS ALT2 TSL 1 (best) BASIC18.64■□□□□ 0.57
DEFA4P12838 SAP25-204ENST00000622764 1031 ntAPPRIS ALT2 TSL 5 BASIC18.64■□□□□ 0.57
DEFA4P12838 HYI-213ENST00000583037 1322 ntTSL 5 BASIC18.64■□□□□ 0.57
DEFA4P12838 ZFYVE28-202ENST00000503000 1874 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
DEFA4P12838 CTSF-201ENST00000310325 2035 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
DEFA4P12838 LYL1-201ENST00000264824 1490 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
DEFA4P12838 SNX18-201ENST00000326277 2063 ntTSL 2 BASIC18.64■□□□□ 0.57
DEFA4P12838 ZFAND4-205ENST00000374371 2283 ntTSL 5 BASIC18.63■□□□□ 0.57
DEFA4P12838 DENND4B-201ENST00000361217 5706 ntAPPRIS P2 TSL 1 (best) BASIC18.63■□□□□ 0.57
Retrieved 100 of 98,524 protein–RNA pairs in 35.6 ms