Protein–RNA interactions for Protein: P11441

UBL4A, Ubiquitin-like protein 4A, humanhuman

Predictions only

Length 157 aa.

Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBL4AP11441 H2AFY-204ENST00000423969 924 ntTSL 2 BASIC21.39■■□□□ 1.01
UBL4AP11441 SSX2IP-209ENST00000603677 1149 ntTSL 1 (best) BASIC21.39■■□□□ 1.01
UBL4AP11441 INPP5J-206ENST00000404453 1613 ntTSL 1 (best) BASIC21.39■■□□□ 1.01
UBL4AP11441 RFNG-201ENST00000310496 1828 ntAPPRIS P1 TSL 2 BASIC21.39■■□□□ 1.01
UBL4AP11441 NR6A1-201ENST00000344523 1846 ntAPPRIS ALT2 TSL 5 BASIC21.39■■□□□ 1.01
UBL4AP11441 AZIN2-201ENST00000294517 2182 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
UBL4AP11441 PDS5A-202ENST00000503396 2685 ntTSL 1 (best) BASIC21.38■■□□□ 1.01
UBL4AP11441 BEX3-202ENST00000372634 753 ntTSL 2 BASIC21.38■■□□□ 1.01
UBL4AP11441 IDNK-201ENST00000376417 511 ntTSL 5 BASIC21.38■■□□□ 1.01
UBL4AP11441 IDNK-202ENST00000376419 692 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
UBL4AP11441 CDCA5-202ENST00000404147 1012 ntTSL 2 BASIC21.38■■□□□ 1.01
UBL4AP11441 LINC01770-201ENST00000417917 634 ntTSL 2 BASIC21.38■■□□□ 1.01
UBL4AP11441 MSX2-201ENST00000239243 2241 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
UBL4AP11441 ANKRD54-201ENST00000215941 2184 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
UBL4AP11441 CYS1-201ENST00000381813 2738 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
UBL4AP11441 DAZAP1-205ENST00000587079 2086 ntAPPRIS ALT1 TSL 5 BASIC21.38■■□□□ 1.01
UBL4AP11441 SLC52A2-202ENST00000402965 1777 ntAPPRIS P1 TSL 2 BASIC21.38■■□□□ 1.01
UBL4AP11441 AC145124.1-201ENST00000528514 1361 ntTSL 2 BASIC21.37■■□□□ 1.01
UBL4AP11441 EGFL8-219ENST00000333845 1310 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
UBL4AP11441 FAM171A2-201ENST00000293443 3160 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
UBL4AP11441 NUDT18-202ENST00000613958 1754 ntTSL 2 BASIC21.37■■□□□ 1.01
UBL4AP11441 TSEN34-201ENST00000302937 2294 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
UBL4AP11441 SLBP-206ENST00000489418 1977 ntAPPRIS P2 TSL 1 (best) BASIC21.37■■□□□ 1.01
UBL4AP11441 CLDN5-201ENST00000403084 2357 ntBASIC21.37■■□□□ 1.01
UBL4AP11441 SLC22A31-206ENST00000614943 1860 ntTSL 5 BASIC21.37■■□□□ 1.01
UBL4AP11441 LINC00543-201ENST00000567234 1845 ntBASIC21.36■■□□□ 1.01
UBL4AP11441 PCSK6-220ENST00000622483 3132 ntAPPRIS ALT2 TSL 1 (best) BASIC21.36■■□□□ 1.01
UBL4AP11441 PRRX2-201ENST00000372469 1311 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
UBL4AP11441 FAM162B-201ENST00000368557 1036 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
UBL4AP11441 LINC01124-201ENST00000409786 2117 ntBASIC21.36■■□□□ 1.01
UBL4AP11441 C9orf147-202ENST00000457681 561 ntTSL 2 BASIC21.36■■□□□ 1.01
UBL4AP11441 ILDR2-208ENST00000529387 1238 ntTSL 5 BASIC21.36■■□□□ 1.01
UBL4AP11441 AC009511.2-201ENST00000545904 679 ntTSL 2 BASIC21.36■■□□□ 1.01
UBL4AP11441 PVT1_1.1-201ENST00000615125 194 ntBASIC21.36■■□□□ 1.01
UBL4AP11441 NKX3-2-201ENST00000382438 2801 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
UBL4AP11441 FAM124A-204ENST00000615498 2383 ntTSL 1 (best) BASIC21.36■■□□□ 1.01
UBL4AP11441 ZNRF1-201ENST00000320619 2479 ntTSL 1 (best) BASIC21.35■■□□□ 1.01
UBL4AP11441 MYO10-205ENST00000507288 1677 ntTSL 1 (best) BASIC21.35■■□□□ 1.01
UBL4AP11441 ZNF503-AS2-201ENST00000425916 2026 ntTSL 1 (best) BASIC21.35■■□□□ 1.01
UBL4AP11441 TBL1X-201ENST00000217964 5871 ntTSL 1 (best) BASIC21.35■■□□□ 1.01
UBL4AP11441 AGBL5-201ENST00000323064 2382 ntAPPRIS ALT2 TSL 1 (best) BASIC21.35■■□□□ 1.01
UBL4AP11441 C5orf38-202ENST00000397835 681 ntAPPRIS ALT2 TSL 5 BASIC21.35■■□□□ 1.01
UBL4AP11441 VSTM2A-202ENST00000402613 1076 ntTSL 2 BASIC21.35■■□□□ 1.01
UBL4AP11441 QDPR-202ENST00000428702 1278 ntTSL 2 BASIC21.35■■□□□ 1.01
UBL4AP11441 NDEL1-219ENST00000585098 454 ntTSL 3 BASIC21.35■■□□□ 1.01
UBL4AP11441 PFN2-210ENST00000481767 1620 ntTSL 2 BASIC21.35■■□□□ 1.01
UBL4AP11441 PPP2R2D-201ENST00000455566 5738 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
UBL4AP11441 RBM33-201ENST00000287912 1404 ntTSL 2 BASIC21.35■■□□□ 1.01
UBL4AP11441 MOB4-204ENST00000409360 1447 ntTSL 5 BASIC21.35■■□□□ 1.01
UBL4AP11441 PREB-202ENST00000406567 1910 ntTSL 5 BASIC21.35■■□□□ 1.01
UBL4AP11441 SYNGR3-201ENST00000248121 2051 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
UBL4AP11441 AC093323.1-202ENST00000635031 2045 ntBASIC21.34■■□□□ 1.01
UBL4AP11441 BDH1-207ENST00000441275 1605 ntTSL 5 BASIC21.34■■□□□ 1.01
UBL4AP11441 MAGI2-208ENST00000522391 4878 ntAPPRIS ALT2 TSL 5 BASIC21.34■■□□□ 1.01
UBL4AP11441 CST6-201ENST00000312134 759 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
UBL4AP11441 RASGRP2-204ENST00000377487 642 ntTSL 2 BASIC21.34■■□□□ 1.01
UBL4AP11441 CT47A7-201ENST00000434883 1288 ntAPPRIS P1 TSL 2 BASIC21.34■■□□□ 1.01
UBL4AP11441 AC011551.1-201ENST00000614101 683 ntBASIC21.34■■□□□ 1.01
UBL4AP11441 ADIPOR1-201ENST00000340990 2177 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
UBL4AP11441 CLEC2L-201ENST00000422142 1359 ntAPPRIS P2 TSL 3 BASIC21.34■■□□□ 1.01
UBL4AP11441 HLA-L-211ENST00000482052 1765 ntBASIC21.33■■□□□ 1.01
UBL4AP11441 MADCAM1-202ENST00000346144 1309 ntAPPRIS ALT2 TSL 1 (best) BASIC21.33■■□□□ 1.01
UBL4AP11441 PAOX-206ENST00000480071 1324 ntTSL 1 (best) BASIC21.33■■□□□ 1.01
UBL4AP11441 DGAT2-201ENST00000228027 2453 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1.01
UBL4AP11441 KRTAP5-5-201ENST00000399676 933 ntAPPRIS P1 BASIC21.33■■□□□ 1.01
UBL4AP11441 ENHO-201ENST00000399775 1082 ntAPPRIS P1 TSL 2 BASIC21.33■■□□□ 1.01
UBL4AP11441 HAGHL-205ENST00000561546 1041 ntTSL 2 BASIC21.33■■□□□ 1.01
UBL4AP11441 SEC11C-204ENST00000587834 1202 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1.01
UBL4AP11441 MROH6-202ENST00000524906 1794 ntAPPRIS ALT2 TSL 3 BASIC21.33■■□□□ 1
UBL4AP11441 R3HDM4-203ENST00000587975 1765 ntTSL 3 BASIC21.33■■□□□ 1
UBL4AP11441 FOXP4-203ENST00000373060 5948 ntTSL 5 BASIC21.33■■□□□ 1
UBL4AP11441 FOXP4-204ENST00000373063 5910 ntTSL 1 (best) BASIC21.33■■□□□ 1
UBL4AP11441 NDEL1-201ENST00000334527 2372 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
UBL4AP11441 LINC01970-201ENST00000581489 1810 ntTSL 1 (best) BASIC21.32■■□□□ 1
UBL4AP11441 MRPL4-207ENST00000590669 1423 ntTSL 1 (best) BASIC21.32■■□□□ 1
UBL4AP11441 MZT2B-201ENST00000281871 933 ntAPPRIS P3 TSL 1 (best) BASIC21.32■■□□□ 1
UBL4AP11441 MZT2A-201ENST00000309451 624 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
UBL4AP11441 PROSER2-202ENST00000379200 1232 ntAPPRIS ALT2 BASIC21.32■■□□□ 1
UBL4AP11441 HSPBP1-201ENST00000255631 1768 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
UBL4AP11441 DCAF15-201ENST00000254337 2278 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
UBL4AP11441 GBX2-201ENST00000306318 2123 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
UBL4AP11441 GJC1-209ENST00000592524 1837 ntAPPRIS P1 TSL 2 BASIC21.32■■□□□ 1
UBL4AP11441 GP1BB-201ENST00000366425 1553 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
UBL4AP11441 PTRH1-205ENST00000423807 1570 ntTSL 2 BASIC21.31■■□□□ 1
UBL4AP11441 PLEKHA8-202ENST00000396257 1907 ntTSL 1 (best) BASIC21.31■■□□□ 1
UBL4AP11441 IRF2BP1-201ENST00000302165 2564 ntAPPRIS P1 BASIC21.31■■□□□ 1
UBL4AP11441 GOLGA7-201ENST00000357743 2027 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
UBL4AP11441 KRT10-201ENST00000269576 2124 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
UBL4AP11441 KAT5-208ENST00000530446 1697 ntTSL 1 (best) BASIC21.31■■□□□ 1
UBL4AP11441 DOK3-205ENST00000501403 1872 ntAPPRIS P1 TSL 5 BASIC21.3■■□□□ 1
UBL4AP11441 ESR2-202ENST00000341099 2060 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
UBL4AP11441 SDHAF1-201ENST00000378887 1117 ntAPPRIS P1 BASIC21.3■■□□□ 1
UBL4AP11441 R3HCC1-202ENST00000411463 1467 ntAPPRIS P5 TSL 5 BASIC21.3■■□□□ 1
UBL4AP11441 SLIT1-203ENST00000371041 1695 ntTSL 2 BASIC21.3■■□□□ 1
UBL4AP11441 CNN3-202ENST00000394202 1974 ntTSL 2 BASIC21.3■■□□□ 1
UBL4AP11441 MATK-204ENST00000585778 1994 ntAPPRIS ALT2 TSL 1 (best) BASIC21.3■■□□□ 1
UBL4AP11441 CPLX1-201ENST00000304062 2181 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
UBL4AP11441 BMP6-201ENST00000283147 2780 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
UBL4AP11441 AP000802.1-201ENST00000500537 1934 ntTSL 1 (best) BASIC21.29■■□□□ 1
UBL4AP11441 PDE10A-205ENST00000616273 2118 ntTSL 2 BASIC21.29■■□□□ 1
Retrieved 100 of 98,524 protein–RNA pairs in 14.8 ms