Protein–RNA interactions for Protein: P04049

RAF1, RAF proto-oncogene serine/threonine-protein kinase, humanhuman

Predictions only

Length 648 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAF1P04049 AP003733.4-201ENST00000623785 1697 ntBASIC20.93■□□□□ 0.94
RAF1P04049 MFSD5-201ENST00000329548 1760 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
RAF1P04049 AKT1S1-201ENST00000344175 1760 ntAPPRIS P1 TSL 3 BASIC20.92■□□□□ 0.94
RAF1P04049 SLC22A31-206ENST00000614943 1860 ntTSL 5 BASIC20.92■□□□□ 0.94
RAF1P04049 EPS8L1-205ENST00000586329 2130 ntTSL 5 BASIC20.92■□□□□ 0.94
RAF1P04049 OSCAR-206ENST00000391760 629 ntTSL 2 BASIC20.92■□□□□ 0.94
RAF1P04049 HOXC-AS1-201ENST00000505700 548 ntTSL 2 BASIC20.92■□□□□ 0.94
RAF1P04049 ZAR1-201ENST00000327939 1460 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
RAF1P04049 RDH14-201ENST00000381249 1587 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
RAF1P04049 AL359504.2-201ENST00000605506 1601 ntBASIC20.92■□□□□ 0.94
RAF1P04049 EED-207ENST00000528180 1745 ntTSL 5 BASIC20.92■□□□□ 0.94
RAF1P04049 MYCL-201ENST00000372815 1944 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
RAF1P04049 AC079834.2-201ENST00000609776 1949 ntBASIC20.92■□□□□ 0.94
RAF1P04049 CLDN5-201ENST00000403084 2357 ntBASIC20.92■□□□□ 0.94
RAF1P04049 C16orf95-201ENST00000253461 953 ntAPPRIS P3 TSL 1 (best) BASIC20.91■□□□□ 0.94
RAF1P04049 TMEM44-202ENST00000347147 2245 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
RAF1P04049 NAXE-202ENST00000368234 901 ntTSL 1 (best) BASIC20.91■□□□□ 0.94
RAF1P04049 TK2-216ENST00000564917 1156 ntTSL 3 BASIC20.91■□□□□ 0.94
RAF1P04049 AL121906.1-201ENST00000606866 440 ntTSL 3 BASIC20.91■□□□□ 0.94
RAF1P04049 WRNIP1-205ENST00000618555 2651 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
RAF1P04049 WDR38-203ENST00000618744 1270 ntTSL 1 (best) BASIC20.91■□□□□ 0.94
RAF1P04049 AC008406.3-201ENST00000620001 1374 ntBASIC20.91■□□□□ 0.94
RAF1P04049 PPP4C-214ENST00000627746 1301 ntTSL 5 BASIC20.91■□□□□ 0.94
RAF1P04049 NFKBIB-204ENST00000572515 1929 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
RAF1P04049 EPCAM-201ENST00000263735 1724 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
RAF1P04049 LRFN4-202ENST00000393952 1550 ntTSL 5 BASIC20.9■□□□□ 0.94
RAF1P04049 CT47A7-201ENST00000434883 1288 ntAPPRIS P1 TSL 2 BASIC20.9■□□□□ 0.94
RAF1P04049 TMPO-AS1-201ENST00000546421 738 ntTSL 5 BASIC20.9■□□□□ 0.94
RAF1P04049 PLEKHJ1-213ENST00000591099 1092 ntTSL 2 BASIC20.9■□□□□ 0.94
RAF1P04049 TMEM202-AS1-202ENST00000565181 2325 ntBASIC20.9■□□□□ 0.94
RAF1P04049 FNTA-201ENST00000302279 1840 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
RAF1P04049 AKT1-203ENST00000407796 2710 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
RAF1P04049 GATA4-207ENST00000532059 1459 ntAPPRIS ALT1 TSL 1 (best) BASIC20.89■□□□□ 0.94
RAF1P04049 ADIPOR1-201ENST00000340990 2177 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.94
RAF1P04049 PYCR1-203ENST00000402252 1346 ntTSL 2 BASIC20.89■□□□□ 0.93
RAF1P04049 CPOX-201ENST00000264193 2825 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
RAF1P04049 BIN1-201ENST00000259238 2338 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
RAF1P04049 CADM4-201ENST00000222374 2178 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
RAF1P04049 VAX1-202ENST00000369206 1723 ntAPPRIS P1 TSL 5 BASIC20.88■□□□□ 0.93
RAF1P04049 TMEM104-205ENST00000582773 1740 ntTSL 2 BASIC20.88■□□□□ 0.93
RAF1P04049 MYDGF-201ENST00000262947 1018 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
RAF1P04049 TRAPPC5-202ENST00000426877 765 ntAPPRIS P1 TSL 2 BASIC20.88■□□□□ 0.93
RAF1P04049 AC087393.1-201ENST00000582896 145 ntBASIC20.88■□□□□ 0.93
RAF1P04049 AC010913.1-201ENST00000608612 420 ntTSL 2 BASIC20.88■□□□□ 0.93
RAF1P04049 CCDC194-202ENST00000636079 705 ntAPPRIS P1 TSL 5 BASIC20.88■□□□□ 0.93
RAF1P04049 CRACR2B-201ENST00000450448 1663 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
RAF1P04049 TGFBRAP1-202ENST00000393359 5979 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
RAF1P04049 NAB1-202ENST00000409581 2360 ntAPPRIS P3 TSL 2 BASIC20.88■□□□□ 0.93
RAF1P04049 FAM107B-211ENST00000468747 2633 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
RAF1P04049 RSPH1-201ENST00000291536 1430 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
RAF1P04049 E2F5-202ENST00000416274 1728 ntAPPRIS P4 TSL 1 (best) BASIC20.87■□□□□ 0.93
RAF1P04049 WIPI2-202ENST00000382384 1948 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
RAF1P04049 MIR935-201ENST00000401179 91 ntBASIC20.87■□□□□ 0.93
RAF1P04049 MOSPD3-204ENST00000424091 1115 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
RAF1P04049 AC073934.1-201ENST00000490314 495 ntTSL 4 BASIC20.87■□□□□ 0.93
RAF1P04049 FXYD7-204ENST00000588265 636 ntTSL 2 BASIC20.87■□□□□ 0.93
RAF1P04049 SUGCT-209ENST00000628514 1591 ntAPPRIS P4 TSL 1 (best) BASIC20.87■□□□□ 0.93
RAF1P04049 HIRA-202ENST00000340170 3395 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
RAF1P04049 USP2-204ENST00000525735 1704 ntAPPRIS ALT1 TSL 1 (best) BASIC20.87■□□□□ 0.93
RAF1P04049 PAPOLA-225ENST00000557471 1421 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
RAF1P04049 NSMCE4A-202ENST00000369023 1394 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
RAF1P04049 ZNF767P-202ENST00000472212 2100 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
RAF1P04049 C15orf59-201ENST00000379822 1342 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
RAF1P04049 PRR7-204ENST00000510492 1285 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
RAF1P04049 GRAMD4P7-201ENST00000578182 1232 ntBASIC20.86■□□□□ 0.93
RAF1P04049 PEX5-205ENST00000420616 2477 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
RAF1P04049 FAM124A-201ENST00000280057 2104 ntTSL 2 BASIC20.86■□□□□ 0.93
RAF1P04049 MEIS3-201ENST00000331559 2104 ntAPPRIS ALT2 TSL 5 BASIC20.86■□□□□ 0.93
RAF1P04049 RAP2A-201ENST00000245304 5487 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
RAF1P04049 RCC2-201ENST00000375433 2030 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
RAF1P04049 NDEL1-219ENST00000585098 454 ntTSL 3 BASIC20.85■□□□□ 0.93
RAF1P04049 ZSCAN18-202ENST00000421612 1488 ntTSL 4 BASIC20.85■□□□□ 0.93
RAF1P04049 GALNT12-201ENST00000375011 2735 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
RAF1P04049 RITA1-203ENST00000552495 1898 ntTSL 2 BASIC20.85■□□□□ 0.93
RAF1P04049 PLEKHA8-202ENST00000396257 1907 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
RAF1P04049 LAT-201ENST00000354453 1713 ntAPPRIS ALT2 TSL 5 BASIC20.84■□□□□ 0.93
RAF1P04049 WDR38-202ENST00000613760 1323 ntAPPRIS ALT2 TSL 1 (best) BASIC20.84■□□□□ 0.93
RAF1P04049 CRIM1-201ENST00000280527 5912 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
RAF1P04049 SLC35B2-202ENST00000393812 2043 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
RAF1P04049 AC078883.1-201ENST00000442417 950 ntTSL 3 BASIC20.84■□□□□ 0.93
RAF1P04049 CREM-229ENST00000474362 1030 ntTSL 2 BASIC20.84■□□□□ 0.93
RAF1P04049 DTWD2-204ENST00000515439 1275 ntTSL 5 BASIC20.84■□□□□ 0.93
RAF1P04049 LSM7-204ENST00000587502 575 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
RAF1P04049 PELI3-201ENST00000320740 2740 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
RAF1P04049 FBXW5-201ENST00000325285 2274 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
RAF1P04049 SCARA5-204ENST00000524352 1945 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
RAF1P04049 ZNF205-202ENST00000382192 2062 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
RAF1P04049 PHC2-202ENST00000373418 2550 ntAPPRIS ALT2 TSL 1 (best) BASIC20.84■□□□□ 0.93
RAF1P04049 SLCO3A1-201ENST00000318445 5115 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
RAF1P04049 ID2-201ENST00000234091 2041 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
RAF1P04049 TNFSF12-TNFSF13-201ENST00000293826 1816 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
RAF1P04049 GJC1-209ENST00000592524 1837 ntAPPRIS P1 TSL 2 BASIC20.83■□□□□ 0.93
RAF1P04049 KRT125P-201ENST00000546827 989 ntBASIC20.83■□□□□ 0.93
RAF1P04049 EME2-205ENST00000568449 1234 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
RAF1P04049 LSM7-203ENST00000585409 512 ntTSL 2 BASIC20.83■□□□□ 0.93
RAF1P04049 AC097639.1-201ENST00000565519 1891 ntBASIC20.83■□□□□ 0.92
RAF1P04049 KLC1-205ENST00000380038 2322 ntTSL 2 BASIC20.83■□□□□ 0.92
RAF1P04049 HDGFL2-210ENST00000621835 2255 ntAPPRIS ALT2 TSL 1 (best) BASIC20.83■□□□□ 0.92
RAF1P04049 MMD-201ENST00000262065 2735 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.92
RAF1P04049 MSX2-201ENST00000239243 2241 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
Retrieved 100 of 98,524 protein–RNA pairs in 87.3 ms