Protein–RNA interactions for Protein: P04035

HMGCR, 3-hydroxy-3-methylglutaryl-coenzyme A reductase, humanhuman

Predictions only

Length 888 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCRP04035 CASP9-202ENST00000348549 1621 ntTSL 1 (best) BASIC26.48■■□□□ 1.83
HMGCRP04035 GLI3-203ENST00000437480 451 ntTSL 2 BASIC26.48■■□□□ 1.83
HMGCRP04035 ACAA1-220ENST00000627515 1862 ntTSL 5 BASIC26.48■■□□□ 1.83
HMGCRP04035 HOOK2-201ENST00000264827 2603 ntAPPRIS P1 TSL 1 (best) BASIC26.48■■□□□ 1.83
HMGCRP04035 RNF166-201ENST00000312838 1883 ntAPPRIS P1 TSL 1 (best) BASIC26.47■■□□□ 1.83
HMGCRP04035 AL162430.1-201ENST00000480705 870 ntBASIC26.47■■□□□ 1.83
HMGCRP04035 AC087623.3-201ENST00000607047 1098 ntBASIC26.47■■□□□ 1.83
HMGCRP04035 TMEM179-204ENST00000556573 1430 ntAPPRIS P1 TSL 3 BASIC26.47■■□□□ 1.83
HMGCRP04035 GLRX3-201ENST00000331244 1302 ntAPPRIS P1 TSL 1 (best) BASIC26.46■■□□□ 1.83
HMGCRP04035 CTSA-203ENST00000372459 1972 ntTSL 1 (best) BASIC26.46■■□□□ 1.83
HMGCRP04035 PSMG1-201ENST00000331573 2154 ntAPPRIS P1 TSL 1 (best) BASIC26.46■■□□□ 1.83
HMGCRP04035 PLD4-205ENST00000553861 667 ntTSL 2 BASIC26.46■■□□□ 1.83
HMGCRP04035 AC093249.6-202ENST00000568500 1142 ntTSL 2 BASIC26.46■■□□□ 1.83
HMGCRP04035 FXYD7-201ENST00000270310 712 ntAPPRIS P2 TSL 1 (best) BASIC26.45■■□□□ 1.82
HMGCRP04035 C1QTNF12-201ENST00000330388 1036 ntAPPRIS P1 TSL 1 (best) BASIC26.45■■□□□ 1.82
HMGCRP04035 TMEM218-209ENST00000529583 848 ntAPPRIS P1 TSL 3 BASIC26.45■■□□□ 1.82
HMGCRP04035 AIPL1-206ENST00000571740 1202 ntAPPRIS ALT2 TSL 1 (best) BASIC26.45■■□□□ 1.82
HMGCRP04035 UCK1-204ENST00000372215 2167 ntAPPRIS P1 TSL 1 (best) BASIC26.45■■□□□ 1.82
HMGCRP04035 APLP1-201ENST00000221891 2495 ntAPPRIS P1 TSL 1 (best) BASIC26.45■■□□□ 1.82
HMGCRP04035 USP2-204ENST00000525735 1704 ntAPPRIS ALT1 TSL 1 (best) BASIC26.45■■□□□ 1.82
HMGCRP04035 STEAP2-207ENST00000402625 1372 ntTSL 5 BASIC26.45■■□□□ 1.82
HMGCRP04035 DHRS13-202ENST00000394901 2037 ntTSL 1 (best) BASIC26.44■■□□□ 1.82
HMGCRP04035 C6orf89-201ENST00000355190 1309 ntAPPRIS P3 TSL 1 (best) BASIC26.44■■□□□ 1.82
HMGCRP04035 MEIS1-AS3-201ENST00000454167 707 ntTSL 4 BASIC26.44■■□□□ 1.82
HMGCRP04035 PRSS22-203ENST00000571228 1037 ntTSL 2 BASIC26.44■■□□□ 1.82
HMGCRP04035 MIR4767-201ENST00000582827 78 ntBASIC26.44■■□□□ 1.82
HMGCRP04035 SLC12A5-217ENST00000626937 1224 ntTSL 1 (best) BASIC26.44■■□□□ 1.82
HMGCRP04035 UBL7-202ENST00000395081 1427 ntAPPRIS P1 TSL 1 (best) BASIC26.44■■□□□ 1.82
HMGCRP04035 SYT6-210ENST00000641643 1587 ntBASIC26.44■■□□□ 1.82
HMGCRP04035 REST-212ENST00000640343 1352 ntTSL 1 (best) BASIC26.44■■□□□ 1.82
HMGCRP04035 C11orf80-210ENST00000527634 1666 ntAPPRIS ALT2 TSL 5 BASIC26.44■■□□□ 1.82
HMGCRP04035 TNFSF12-TNFSF13-201ENST00000293826 1816 ntAPPRIS P1 TSL 1 (best) BASIC26.44■■□□□ 1.82
HMGCRP04035 HDGFL1-201ENST00000510882 2174 ntAPPRIS P1 BASIC26.43■■□□□ 1.82
HMGCRP04035 ARHGDIA-217ENST00000584461 886 ntTSL 2 BASIC26.43■■□□□ 1.82
HMGCRP04035 LURAP1L-201ENST00000319264 1753 ntAPPRIS P1 TSL 1 (best) BASIC26.43■■□□□ 1.82
HMGCRP04035 HOXB3-201ENST00000311626 2642 ntAPPRIS P1 TSL 1 (best) BASIC26.42■■□□□ 1.82
HMGCRP04035 TCEA1-211ENST00000522635 1432 ntTSL 2 BASIC26.42■■□□□ 1.82
HMGCRP04035 AC092171.4-201ENST00000609130 632 ntBASIC26.42■■□□□ 1.82
HMGCRP04035 AQP10-201ENST00000324978 1791 ntAPPRIS P1 TSL 1 (best) BASIC26.42■■□□□ 1.82
HMGCRP04035 IHH-201ENST00000295731 2023 ntAPPRIS P1 TSL 1 (best) BASIC26.42■■□□□ 1.82
HMGCRP04035 C7orf25-205ENST00000438029 1743 ntAPPRIS P1 TSL 2 BASIC26.42■■□□□ 1.82
HMGCRP04035 PAIP1-208ENST00000514514 1603 ntTSL 5 BASIC26.41■■□□□ 1.82
HMGCRP04035 BAD-203ENST00000394532 1157 ntAPPRIS P1 TSL 1 (best) BASIC26.41■■□□□ 1.82
HMGCRP04035 RPUSD3-206ENST00000433535 1178 ntTSL 1 (best) BASIC26.41■■□□□ 1.82
HMGCRP04035 PRELID2-204ENST00000505416 738 ntAPPRIS P2 TSL 3 BASIC26.41■■□□□ 1.82
HMGCRP04035 CA15P2-201ENST00000611168 834 ntBASIC26.41■■□□□ 1.82
HMGCRP04035 HAND2-201ENST00000359562 2780 ntAPPRIS P1 TSL 1 (best) BASIC26.41■■□□□ 1.82
HMGCRP04035 RASA4CP-201ENST00000424092 1398 ntBASIC26.41■■□□□ 1.82
HMGCRP04035 CCR10-201ENST00000332438 1773 ntAPPRIS P1 TSL 1 (best) BASIC26.41■■□□□ 1.82
HMGCRP04035 LINC00588-201ENST00000521663 1875 ntTSL 2 BASIC26.4■■□□□ 1.82
HMGCRP04035 THRA-204ENST00000546243 1909 ntAPPRIS P1 TSL 2 BASIC26.4■■□□□ 1.82
HMGCRP04035 PTMA-205ENST00000410064 814 ntTSL 2 BASIC26.4■■□□□ 1.82
HMGCRP04035 MAG-206ENST00000597035 542 ntTSL 4 BASIC26.4■■□□□ 1.82
HMGCRP04035 TSPAN4-202ENST00000397396 1332 ntTSL 5 BASIC26.39■■□□□ 1.82
HMGCRP04035 SLC25A6-201ENST00000381401 2062 ntAPPRIS P1 TSL 1 (best) BASIC26.39■■□□□ 1.82
HMGCRP04035 RDH14-201ENST00000381249 1587 ntAPPRIS P1 TSL 1 (best) BASIC26.39■■□□□ 1.82
HMGCRP04035 GADD45A-202ENST00000370986 1496 ntAPPRIS P1 TSL 1 (best) BASIC26.39■■□□□ 1.82
HMGCRP04035 CENPH-201ENST00000283006 1389 ntAPPRIS P1 TSL 1 (best) BASIC26.39■■□□□ 1.82
HMGCRP04035 SCO2-204ENST00000543927 1051 ntAPPRIS P1 TSL 2 BASIC26.39■■□□□ 1.82
HMGCRP04035 EXOC3-209ENST00000512944 2825 ntAPPRIS P1 TSL 1 (best) BASIC26.39■■□□□ 1.82
HMGCRP04035 PORCN-202ENST00000355961 1848 ntAPPRIS ALT1 TSL 1 (best) BASIC26.39■■□□□ 1.81
HMGCRP04035 GNB2-203ENST00000393926 1641 ntAPPRIS P1 TSL 5 BASIC26.39■■□□□ 1.81
HMGCRP04035 IFNL4-201ENST00000606380 1637 ntAPPRIS P5 TSL 1 (best) BASIC26.39■■□□□ 1.81
HMGCRP04035 AC005703.6-201ENST00000623265 1329 ntBASIC26.39■■□□□ 1.81
HMGCRP04035 TOP1MT-208ENST00000519148 1868 ntTSL 2 BASIC26.38■■□□□ 1.81
HMGCRP04035 IKBKG-211ENST00000615874 1460 ntTSL 5 BASIC26.38■■□□□ 1.81
HMGCRP04035 IKBKG-215ENST00000619941 1463 ntTSL 5 BASIC26.38■■□□□ 1.81
HMGCRP04035 PRELID1-203ENST00000503216 1171 ntTSL 1 (best) BASIC26.38■■□□□ 1.81
HMGCRP04035 C9orf40-201ENST00000376854 2327 ntAPPRIS P1 TSL 1 (best) BASIC26.38■■□□□ 1.81
HMGCRP04035 ZNF653-201ENST00000293771 2240 ntAPPRIS P1 TSL 1 (best) BASIC26.38■■□□□ 1.81
HMGCRP04035 CYC1-201ENST00000318911 1240 ntAPPRIS P1 TSL 1 (best) BASIC26.37■■□□□ 1.81
HMGCRP04035 AC027682.1-201ENST00000562846 899 ntBASIC26.37■■□□□ 1.81
HMGCRP04035 SYNGR3-206ENST00000618464 1213 ntTSL 1 (best) BASIC26.37■■□□□ 1.81
HMGCRP04035 SLC35A3-216ENST00000639221 1032 ntTSL 5 BASIC26.37■■□□□ 1.81
HMGCRP04035 FNDC4-201ENST00000264703 1657 ntAPPRIS P1 TSL 1 (best) BASIC26.37■■□□□ 1.81
HMGCRP04035 NDEL1-202ENST00000380025 2181 ntTSL 5 BASIC26.37■■□□□ 1.81
HMGCRP04035 CEP104-201ENST00000378223 1121 ntTSL 1 (best) BASIC26.36■■□□□ 1.81
HMGCRP04035 CLPSL2-202ENST00000403376 405 ntAPPRIS P3 TSL 1 (best) BASIC26.36■■□□□ 1.81
HMGCRP04035 NR6A1-203ENST00000416460 1898 ntAPPRIS ALT2 TSL 1 (best) BASIC26.36■■□□□ 1.81
HMGCRP04035 VIPR2-203ENST00000402066 1926 ntAPPRIS ALT2 TSL 5 BASIC26.35■■□□□ 1.81
HMGCRP04035 PYGO2-201ENST00000368456 1306 ntTSL 2 BASIC26.35■■□□□ 1.81
HMGCRP04035 RAB3IL1-202ENST00000394836 2284 ntAPPRIS P1 TSL 1 (best) BASIC26.35■■□□□ 1.81
HMGCRP04035 NPDC1-201ENST00000371600 2187 ntAPPRIS ALT2 TSL 1 (best) BASIC26.34■■□□□ 1.81
HMGCRP04035 AC011511.4-201ENST00000586529 1850 ntAPPRIS P1 TSL 5 BASIC26.34■■□□□ 1.81
HMGCRP04035 GTF2E2-201ENST00000355904 1762 ntAPPRIS P1 TSL 1 (best) BASIC26.34■■□□□ 1.81
HMGCRP04035 YJEFN3-201ENST00000436027 878 ntAPPRIS P1 TSL 1 (best) BASIC26.34■■□□□ 1.81
HMGCRP04035 MROH6-202ENST00000524906 1794 ntAPPRIS ALT2 TSL 3 BASIC26.33■■□□□ 1.81
HMGCRP04035 ATP6V0A2-209ENST00000613625 1620 ntTSL 1 (best) BASIC26.33■■□□□ 1.81
HMGCRP04035 GLTPD2-201ENST00000331264 1023 ntAPPRIS P1 TSL 1 (best) BASIC26.33■■□□□ 1.81
HMGCRP04035 SERBP1P1-201ENST00000396021 1160 ntBASIC26.33■■□□□ 1.81
HMGCRP04035 SLIT1-203ENST00000371041 1695 ntTSL 2 BASIC26.33■■□□□ 1.81
HMGCRP04035 PNCK-215ENST00000447676 1585 ntTSL 2 BASIC26.33■■□□□ 1.8
HMGCRP04035 LRRC75A-203ENST00000470794 1390 ntAPPRIS ALT2 TSL 1 (best) BASIC26.33■■□□□ 1.8
HMGCRP04035 PIK3R2-207ENST00000617130 2187 ntAPPRIS P1 TSL 1 (best) BASIC26.32■■□□□ 1.8
HMGCRP04035 SDHAP1-204ENST00000427415 559 ntTSL 4 BASIC26.32■■□□□ 1.8
HMGCRP04035 EDA-209ENST00000525810 843 ntTSL 1 (best) BASIC26.32■■□□□ 1.8
HMGCRP04035 ORAI3-202ENST00000562699 628 ntTSL 2 BASIC26.32■■□□□ 1.8
HMGCRP04035 TCFL5-201ENST00000217162 2453 ntAPPRIS ALT2 TSL 1 (best) BASIC26.32■■□□□ 1.8
HMGCRP04035 TCFL5-202ENST00000335351 2456 ntAPPRIS P2 TSL 1 (best) BASIC26.32■■□□□ 1.8
HMGCRP04035 DACT2-202ENST00000366796 2028 ntAPPRIS ALT2 TSL 1 (best) BASIC26.32■■□□□ 1.8
Retrieved 100 of 98,524 protein–RNA pairs in 47.7 ms