Protein–RNA interactions for Protein: P00352

ALDH1A1, Retinal dehydrogenase 1, humanhuman

Predictions only

Length 501 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ALDH1A1P00352 TSPAN2-201ENST00000369515 793 ntTSL 3 BASIC26.95■■□□□ 1.9
ALDH1A1P00352 SIRT3-215ENST00000532956 1235 ntTSL 2 BASIC26.95■■□□□ 1.9
ALDH1A1P00352 ACAP1-206ENST00000571471 320 ntTSL 2 BASIC26.95■■□□□ 1.9
ALDH1A1P00352 ECHDC1-203ENST00000368291 1354 ntTSL 2 BASIC26.95■■□□□ 1.9
ALDH1A1P00352 NRM-201ENST00000259953 1755 ntAPPRIS P2 TSL 2 BASIC26.94■■□□□ 1.9
ALDH1A1P00352 TSPAN4-202ENST00000397396 1332 ntTSL 5 BASIC26.94■■□□□ 1.9
ALDH1A1P00352 BCL2L12-201ENST00000246784 990 ntAPPRIS ALT2 TSL 1 (best) BASIC26.94■■□□□ 1.9
ALDH1A1P00352 BHLHA9-201ENST00000391429 902 ntAPPRIS P1 BASIC26.94■■□□□ 1.9
ALDH1A1P00352 EPDR1-202ENST00000423717 638 ntTSL 1 (best) BASIC26.94■■□□□ 1.9
ALDH1A1P00352 SP2-202ENST00000613139 908 ntTSL 5 BASIC26.94■■□□□ 1.9
ALDH1A1P00352 FPGS-202ENST00000373228 1383 ntTSL 5 BASIC26.94■■□□□ 1.9
ALDH1A1P00352 ABCB10P1-201ENST00000614297 2181 ntBASIC26.93■■□□□ 1.9
ALDH1A1P00352 AC108002.2-201ENST00000519782 340 ntTSL 4 BASIC26.93■■□□□ 1.9
ALDH1A1P00352 AES-207ENST00000586839 942 ntTSL 1 (best) BASIC26.93■■□□□ 1.9
ALDH1A1P00352 TCEA1-211ENST00000522635 1432 ntTSL 2 BASIC26.92■■□□□ 1.9
ALDH1A1P00352 SRM-201ENST00000376957 1266 ntAPPRIS P1 TSL 1 (best) BASIC26.92■■□□□ 1.9
ALDH1A1P00352 AL122058.1-201ENST00000412321 1166 ntTSL 1 (best) BASIC26.92■■□□□ 1.9
ALDH1A1P00352 IKBKGP1-201ENST00000612193 1073 ntBASIC26.92■■□□□ 1.9
ALDH1A1P00352 FSD1-204ENST00000597590 1634 ntTSL 5 BASIC26.91■■□□□ 1.9
ALDH1A1P00352 LY6E-201ENST00000292494 1181 ntAPPRIS P2 TSL 1 (best) BASIC26.91■■□□□ 1.9
ALDH1A1P00352 GDNF-203ENST00000381826 778 ntTSL 1 (best) BASIC26.91■■□□□ 1.9
ALDH1A1P00352 CDC37L1-202ENST00000381858 1244 ntTSL 5 BASIC26.91■■□□□ 1.9
ALDH1A1P00352 MELTF-AS1-202ENST00000415244 951 ntTSL 1 (best) BASIC26.91■■□□□ 1.9
ALDH1A1P00352 GDNF-204ENST00000427982 856 ntTSL 1 (best) BASIC26.91■■□□□ 1.9
ALDH1A1P00352 CREB3L2-203ENST00000452463 1105 ntTSL 1 (best) BASIC26.91■■□□□ 1.9
ALDH1A1P00352 RPLP2-207ENST00000530797 637 ntAPPRIS P1 TSL 1 (best) BASIC26.91■■□□□ 1.9
ALDH1A1P00352 AC099791.2-201ENST00000605725 427 ntBASIC26.91■■□□□ 1.9
ALDH1A1P00352 HRH3-203ENST00000611492 900 ntTSL 1 (best) BASIC26.91■■□□□ 1.9
ALDH1A1P00352 ENKD1-206ENST00000602644 1353 ntTSL 5 BASIC26.91■■□□□ 1.9
ALDH1A1P00352 R3HCC1-201ENST00000265806 1773 ntAPPRIS ALT2 TSL 1 (best) BASIC26.9■■□□□ 1.9
ALDH1A1P00352 B3GALT4-204ENST00000451237 1694 ntAPPRIS P1 BASIC26.9■■□□□ 1.9
ALDH1A1P00352 TMEM147-203ENST00000392205 767 ntTSL 2 BASIC26.9■■□□□ 1.9
ALDH1A1P00352 C1QTNF5-203ENST00000530681 1046 ntAPPRIS P1 TSL 1 (best) BASIC26.9■■□□□ 1.9
ALDH1A1P00352 DIRAS1-202ENST00000585334 774 ntAPPRIS P1 BASIC26.9■■□□□ 1.9
ALDH1A1P00352 AC112229.4-201ENST00000488671 1528 ntTSL 2 BASIC26.9■■□□□ 1.9
ALDH1A1P00352 TRIR-201ENST00000242784 970 ntAPPRIS P1 TSL 1 (best) BASIC26.89■■□□□ 1.9
ALDH1A1P00352 SPOCK2-203ENST00000412663 1284 ntTSL 5 BASIC26.89■■□□□ 1.9
ALDH1A1P00352 HERC2P4-206ENST00000568097 1062 ntTSL 5 BASIC26.89■■□□□ 1.9
ALDH1A1P00352 TRAF4-217ENST00000618771 543 ntTSL 5 BASIC26.89■■□□□ 1.9
ALDH1A1P00352 NRXN1-228ENST00000628364 2444 ntTSL 5 BASIC26.89■■□□□ 1.89
ALDH1A1P00352 GNB2-203ENST00000393926 1641 ntAPPRIS P1 TSL 5 BASIC26.88■■□□□ 1.89
ALDH1A1P00352 IFNL4-201ENST00000606380 1637 ntAPPRIS P5 TSL 1 (best) BASIC26.88■■□□□ 1.89
ALDH1A1P00352 SPI1-201ENST00000227163 1168 ntAPPRIS ALT1 TSL 2 BASIC26.88■■□□□ 1.89
ALDH1A1P00352 UHRF2-202ENST00000381373 802 ntTSL 3 BASIC26.88■■□□□ 1.89
ALDH1A1P00352 SLC47A1P1-202ENST00000449666 945 ntBASIC26.88■■□□□ 1.89
ALDH1A1P00352 MPST-208ENST00000628507 698 ntTSL 5 BASIC26.88■■□□□ 1.89
ALDH1A1P00352 AQP10-201ENST00000324978 1791 ntAPPRIS P1 TSL 1 (best) BASIC26.88■■□□□ 1.89
ALDH1A1P00352 MROH6-202ENST00000524906 1794 ntAPPRIS ALT2 TSL 3 BASIC26.88■■□□□ 1.89
ALDH1A1P00352 CASP9-202ENST00000348549 1621 ntTSL 1 (best) BASIC26.87■■□□□ 1.89
ALDH1A1P00352 MARCH2-201ENST00000215555 1376 ntAPPRIS P1 TSL 5 BASIC26.87■■□□□ 1.89
ALDH1A1P00352 OSCAR-203ENST00000356532 1355 ntAPPRIS ALT2 TSL 1 (best) BASIC26.87■■□□□ 1.89
ALDH1A1P00352 OSCAR-204ENST00000358375 1389 ntAPPRIS ALT2 TSL 1 (best) BASIC26.87■■□□□ 1.89
ALDH1A1P00352 OSCAR-210ENST00000616447 1358 ntAPPRIS ALT2 TSL 5 BASIC26.87■■□□□ 1.89
ALDH1A1P00352 WFDC1-201ENST00000219454 1534 ntAPPRIS P1 TSL 1 (best) BASIC26.87■■□□□ 1.89
ALDH1A1P00352 FGFRL1-205ENST00000510644 2304 ntAPPRIS P1 TSL 1 (best) BASIC26.87■■□□□ 1.89
ALDH1A1P00352 ACYP2-202ENST00000394666 993 ntAPPRIS P1 TSL 1 (best) BASIC26.87■■□□□ 1.89
ALDH1A1P00352 TMEM70-203ENST00000517439 617 ntTSL 2 BASIC26.87■■□□□ 1.89
ALDH1A1P00352 SUZ12P1-202ENST00000578070 929 ntTSL 5 BASIC26.87■■□□□ 1.89
ALDH1A1P00352 USP2-204ENST00000525735 1704 ntAPPRIS ALT1 TSL 1 (best) BASIC26.87■■□□□ 1.89
ALDH1A1P00352 CKB-201ENST00000348956 1709 ntAPPRIS P1 TSL 1 (best) BASIC26.86■■□□□ 1.89
ALDH1A1P00352 CT47B1-201ENST00000371311 1328 ntAPPRIS P1 TSL 5 BASIC26.86■■□□□ 1.89
ALDH1A1P00352 PNCK-215ENST00000447676 1585 ntTSL 2 BASIC26.85■■□□□ 1.89
ALDH1A1P00352 THOC6-202ENST00000326266 1419 ntAPPRIS P1 TSL 1 (best) BASIC26.85■■□□□ 1.89
ALDH1A1P00352 CCR10-201ENST00000332438 1773 ntAPPRIS P1 TSL 1 (best) BASIC26.85■■□□□ 1.89
ALDH1A1P00352 CTNNAL1-202ENST00000374593 761 ntTSL 3 BASIC26.85■■□□□ 1.89
ALDH1A1P00352 AL138963.3-201ENST00000610057 588 ntTSL 4 BASIC26.85■■□□□ 1.89
ALDH1A1P00352 ARL6IP4-210ENST00000453766 1491 ntAPPRIS ALT2 TSL 1 (best) BASIC26.85■■□□□ 1.89
ALDH1A1P00352 REST-206ENST00000612429 1376 ntTSL 5 BASIC26.84■■□□□ 1.89
ALDH1A1P00352 REST-207ENST00000616975 1370 ntTSL 5 BASIC26.84■■□□□ 1.89
ALDH1A1P00352 RPL8-201ENST00000262584 1041 ntAPPRIS P1 TSL 1 (best) BASIC26.84■■□□□ 1.89
ALDH1A1P00352 HES6-206ENST00000409574 738 ntTSL 2 BASIC26.84■■□□□ 1.89
ALDH1A1P00352 KRT18P5-201ENST00000436075 1291 ntBASIC26.84■■□□□ 1.89
ALDH1A1P00352 AC005410.1-201ENST00000579522 462 ntTSL 3 BASIC26.84■■□□□ 1.89
ALDH1A1P00352 AC233992.3-201ENST00000607491 485 ntBASIC26.84■■□□□ 1.89
ALDH1A1P00352 AC136469.2-201ENST00000623944 1028 ntBASIC26.84■■□□□ 1.89
ALDH1A1P00352 AMZ2-219ENST00000612294 1498 ntAPPRIS P1 TSL 1 (best) BASIC26.84■■□□□ 1.89
ALDH1A1P00352 REXO4-201ENST00000371935 1899 ntTSL 3 BASIC26.84■■□□□ 1.89
ALDH1A1P00352 TNFSF12-TNFSF13-201ENST00000293826 1816 ntAPPRIS P1 TSL 1 (best) BASIC26.83■■□□□ 1.89
ALDH1A1P00352 C1QTNF1-206ENST00000579760 1672 ntAPPRIS P1 TSL 1 (best) BASIC26.83■■□□□ 1.89
ALDH1A1P00352 RTCA-202ENST00000370126 538 ntTSL 1 (best) BASIC26.83■■□□□ 1.89
ALDH1A1P00352 ZNF846-212ENST00000592859 1206 ntTSL 2 BASIC26.83■■□□□ 1.89
ALDH1A1P00352 HSF4-225ENST00000584272 1549 ntTSL 1 (best) BASIC26.83■■□□□ 1.89
ALDH1A1P00352 NKX6-3-201ENST00000518699 1352 ntAPPRIS P1 TSL 5 BASIC26.83■■□□□ 1.88
ALDH1A1P00352 SLIT1-203ENST00000371041 1695 ntTSL 2 BASIC26.82■■□□□ 1.88
ALDH1A1P00352 AUH-201ENST00000303617 1490 ntTSL 1 (best) BASIC26.82■■□□□ 1.88
ALDH1A1P00352 CREB3L3-205ENST00000602257 1475 ntAPPRIS ALT2 TSL 1 (best) BASIC26.82■■□□□ 1.88
ALDH1A1P00352 CD47-202ENST00000361309 1285 ntTSL 1 (best) BASIC26.82■■□□□ 1.88
ALDH1A1P00352 PPA1-202ENST00000373232 1295 ntAPPRIS P1 TSL 1 (best) BASIC26.82■■□□□ 1.88
ALDH1A1P00352 ID1-201ENST00000376105 1233 ntBASIC26.82■■□□□ 1.88
ALDH1A1P00352 SLC25A45-206ENST00000526432 894 ntTSL 1 (best) BASIC26.82■■□□□ 1.88
ALDH1A1P00352 HSPBP1-202ENST00000433386 1572 ntAPPRIS P1 TSL 1 (best) BASIC26.82■■□□□ 1.88
ALDH1A1P00352 PAIP1-208ENST00000514514 1603 ntTSL 5 BASIC26.82■■□□□ 1.88
ALDH1A1P00352 WDSUB1-205ENST00000409990 1920 ntAPPRIS P1 TSL 2 BASIC26.81■■□□□ 1.88
ALDH1A1P00352 EVC-203ENST00000509451 1960 ntTSL 1 (best) BASIC26.81■■□□□ 1.88
ALDH1A1P00352 C15orf61-202ENST00000557807 769 ntTSL 2 BASIC26.81■■□□□ 1.88
ALDH1A1P00352 PLPP2-202ENST00000327790 1397 ntTSL 5 BASIC26.81■■□□□ 1.88
ALDH1A1P00352 PHF10-202ENST00000366780 1589 ntAPPRIS ALT2 TSL 5 BASIC26.8■■□□□ 1.88
ALDH1A1P00352 PFKFB4-204ENST00000416568 1575 ntTSL 1 (best) BASIC26.8■■□□□ 1.88
ALDH1A1P00352 SHOX2-201ENST00000389589 2072 ntAPPRIS P3 TSL 1 (best) BASIC26.8■■□□□ 1.88
ALDH1A1P00352 MYCBPAP-202ENST00000419930 1640 ntAPPRIS ALT2 TSL 1 (best) BASIC26.8■■□□□ 1.88
Retrieved 100 of 98,524 protein–RNA pairs in 15.8 ms