Protein–RNA interactions for Protein: O60811

PRAMEF2, PRAME family member 2, humanhuman

Predictions only

Length 474 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRAMEF2O60811 RPL31-208ENST00000409733 825 ntAPPRIS P3 TSL 1 (best) BASIC21.81■■□□□ 1.08
PRAMEF2O60811 AC120024.1-201ENST00000562672 995 ntBASIC21.81■■□□□ 1.08
PRAMEF2O60811 MMP25-AS1-209ENST00000576250 779 ntTSL 5 BASIC21.81■■□□□ 1.08
PRAMEF2O60811 SRR-201ENST00000344595 2728 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
PRAMEF2O60811 POLE2-201ENST00000216367 1776 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
PRAMEF2O60811 PABPN1-202ENST00000397276 2768 ntAPPRIS ALT1 TSL 1 (best) BASIC21.81■■□□□ 1.08
PRAMEF2O60811 MRPS34-202ENST00000397375 1024 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
PRAMEF2O60811 CREM-229ENST00000474362 1030 ntTSL 2 BASIC21.8■■□□□ 1.08
PRAMEF2O60811 MIR4787-201ENST00000607364 84 ntBASIC21.8■■□□□ 1.08
PRAMEF2O60811 GATA3-AS1-201ENST00000355358 2214 ntTSL 2 BASIC21.8■■□□□ 1.08
PRAMEF2O60811 RBM33-201ENST00000287912 1404 ntTSL 2 BASIC21.8■■□□□ 1.08
PRAMEF2O60811 DNAJB11-201ENST00000265028 1688 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
PRAMEF2O60811 MT1E-201ENST00000306061 704 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
PRAMEF2O60811 AC011551.1-201ENST00000614101 683 ntBASIC21.79■■□□□ 1.08
PRAMEF2O60811 MBOAT7-201ENST00000245615 2529 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
PRAMEF2O60811 PPP1CC-206ENST00000550991 1882 ntTSL 2 BASIC21.79■■□□□ 1.08
PRAMEF2O60811 FAM107A-203ENST00000447756 1432 ntTSL 1 (best) BASIC21.79■■□□□ 1.08
PRAMEF2O60811 MYCL-201ENST00000372815 1944 ntTSL 1 (best) BASIC21.78■■□□□ 1.08
PRAMEF2O60811 AFDN-201ENST00000344191 5249 ntTSL 5 BASIC21.78■■□□□ 1.08
PRAMEF2O60811 AC090877.2-201ENST00000558441 1738 ntBASIC21.78■■□□□ 1.08
PRAMEF2O60811 CLEC2L-201ENST00000422142 1359 ntAPPRIS P2 TSL 3 BASIC21.78■■□□□ 1.08
PRAMEF2O60811 SLC22A18-201ENST00000312221 1628 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
PRAMEF2O60811 LSR-205ENST00000427250 1606 ntTSL 2 BASIC21.78■■□□□ 1.08
PRAMEF2O60811 TMEM218-215ENST00000532407 1103 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
PRAMEF2O60811 CCDC194-202ENST00000636079 705 ntAPPRIS P1 TSL 5 BASIC21.78■■□□□ 1.08
PRAMEF2O60811 RARA-AS1-201ENST00000581080 1790 ntTSL 1 (best) BASIC21.78■■□□□ 1.08
PRAMEF2O60811 MOB4-204ENST00000409360 1447 ntTSL 5 BASIC21.78■■□□□ 1.08
PRAMEF2O60811 MAP3K5-201ENST00000359015 5197 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
PRAMEF2O60811 CEBPB-201ENST00000303004 1956 ntAPPRIS P1 BASIC21.78■■□□□ 1.08
PRAMEF2O60811 NKAIN3-202ENST00000523211 1988 ntAPPRIS P1 TSL 2 BASIC21.78■■□□□ 1.08
PRAMEF2O60811 ARHGEF9-210ENST00000623517 2143 ntTSL 2 BASIC21.77■■□□□ 1.08
PRAMEF2O60811 TMUB1-201ENST00000297533 1353 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
PRAMEF2O60811 PRELID1-201ENST00000303204 1261 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
PRAMEF2O60811 DLK2-202ENST00000372485 1572 ntAPPRIS ALT1 TSL 5 BASIC21.77■■□□□ 1.08
PRAMEF2O60811 S100A6-201ENST00000368719 665 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
PRAMEF2O60811 MAGI2-AS3-201ENST00000414797 1072 ntTSL 2 BASIC21.76■■□□□ 1.07
PRAMEF2O60811 HADH-203ENST00000505878 1719 ntTSL 1 (best) BASIC21.76■■□□□ 1.07
PRAMEF2O60811 AC026785.2-201ENST00000511821 867 ntTSL 2 BASIC21.76■■□□□ 1.07
PRAMEF2O60811 AC137630.3-201ENST00000607245 391 ntBASIC21.76■■□□□ 1.07
PRAMEF2O60811 MIR663AHG-227ENST00000608084 765 ntTSL 5 BASIC21.76■■□□□ 1.07
PRAMEF2O60811 NBPF26-209ENST00000624419 1133 ntTSL 5 BASIC21.76■■□□□ 1.07
PRAMEF2O60811 MADCAM1-202ENST00000346144 1309 ntAPPRIS ALT2 TSL 1 (best) BASIC21.76■■□□□ 1.07
PRAMEF2O60811 MORF4L1-202ENST00000379535 2274 ntTSL 2 BASIC21.76■■□□□ 1.07
PRAMEF2O60811 DDX42-201ENST00000359353 2783 ntTSL 5 BASIC21.76■■□□□ 1.07
PRAMEF2O60811 BIN1-201ENST00000259238 2338 ntTSL 1 (best) BASIC21.75■■□□□ 1.07
PRAMEF2O60811 TNIP2-206ENST00000510267 2006 ntAPPRIS ALT2 TSL 2 BASIC21.75■■□□□ 1.07
PRAMEF2O60811 TRAPPC5-202ENST00000426877 765 ntAPPRIS P1 TSL 2 BASIC21.75■■□□□ 1.07
PRAMEF2O60811 FAM72B-203ENST00000452190 748 ntTSL 3 BASIC21.75■■□□□ 1.07
PRAMEF2O60811 DTWD2-204ENST00000515439 1275 ntTSL 5 BASIC21.75■■□□□ 1.07
PRAMEF2O60811 GRAMD4P7-201ENST00000578182 1232 ntBASIC21.75■■□□□ 1.07
PRAMEF2O60811 ATG16L2-205ENST00000534905 1614 ntTSL 1 (best) BASIC21.75■■□□□ 1.07
PRAMEF2O60811 HTRA2-202ENST00000352222 1450 ntTSL 1 (best) BASIC21.75■■□□□ 1.07
PRAMEF2O60811 NAGS-201ENST00000293404 2182 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
PRAMEF2O60811 CDC16-204ENST00000360383 2211 ntAPPRIS P3 TSL 5 BASIC21.75■■□□□ 1.07
PRAMEF2O60811 NR6A1-201ENST00000344523 1846 ntAPPRIS ALT2 TSL 5 BASIC21.74■■□□□ 1.07
PRAMEF2O60811 BBC3-203ENST00000439096 1838 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
PRAMEF2O60811 TST-201ENST00000249042 1211 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
PRAMEF2O60811 FAM173A-207ENST00000569529 1052 ntAPPRIS P3 TSL 1 (best) BASIC21.74■■□□□ 1.07
PRAMEF2O60811 TCEA1-214ENST00000640382 1234 ntTSL 5 BASIC21.74■■□□□ 1.07
PRAMEF2O60811 ARSB-206ENST00000565165 1772 ntTSL 1 (best) BASIC21.74■■□□□ 1.07
PRAMEF2O60811 MRPL4-207ENST00000590669 1423 ntTSL 1 (best) BASIC21.73■■□□□ 1.07
PRAMEF2O60811 PYCR1-202ENST00000337943 1890 ntTSL 1 (best) BASIC21.73■■□□□ 1.07
PRAMEF2O60811 WNT11-201ENST00000322563 1930 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
PRAMEF2O60811 VSTM2L-201ENST00000373459 831 ntTSL 3 BASIC21.73■■□□□ 1.07
PRAMEF2O60811 CLIC3-203ENST00000494426 1017 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
PRAMEF2O60811 NRG1-210ENST00000520407 1955 ntTSL 1 (best) BASIC21.73■■□□□ 1.07
PRAMEF2O60811 AC105219.1-201ENST00000531565 1963 ntTSL 1 (best) BASIC21.73■■□□□ 1.07
PRAMEF2O60811 CIRBP-216ENST00000588090 1459 ntAPPRIS P3 TSL 3 BASIC21.72■■□□□ 1.07
PRAMEF2O60811 TAZ-216ENST00000613002 1485 ntTSL 1 (best) BASIC21.72■■□□□ 1.07
PRAMEF2O60811 HSPBP1-201ENST00000255631 1768 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
PRAMEF2O60811 FEZ2-203ENST00000379245 2097 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
PRAMEF2O60811 LINC01970-201ENST00000581489 1810 ntTSL 1 (best) BASIC21.72■■□□□ 1.07
PRAMEF2O60811 GBX1-201ENST00000297537 1092 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
PRAMEF2O60811 MOSPD3-204ENST00000424091 1115 ntTSL 1 (best) BASIC21.72■■□□□ 1.07
PRAMEF2O60811 CHTF8-205ENST00000519520 856 ntTSL 2 BASIC21.72■■□□□ 1.07
PRAMEF2O60811 RFC2-201ENST00000055077 1695 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
PRAMEF2O60811 NEUROG3-201ENST00000242462 1376 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
PRAMEF2O60811 APBA3-201ENST00000316757 2075 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
PRAMEF2O60811 RFNG-201ENST00000310496 1828 ntAPPRIS P1 TSL 2 BASIC21.71■■□□□ 1.07
PRAMEF2O60811 SUGCT-209ENST00000628514 1591 ntAPPRIS P4 TSL 1 (best) BASIC21.71■■□□□ 1.07
PRAMEF2O60811 SYCE1-204ENST00000432597 1254 ntAPPRIS ALT2 TSL 1 (best) BASIC21.71■■□□□ 1.07
PRAMEF2O60811 CUL4A-209ENST00000488558 1111 ntTSL 3 BASIC21.71■■□□□ 1.07
PRAMEF2O60811 CCER2-201ENST00000571838 1057 ntAPPRIS P2 TSL 5 BASIC21.71■■□□□ 1.07
PRAMEF2O60811 CFD-202ENST00000592860 809 ntAPPRIS ALT2 TSL 1 (best) BASIC21.71■■□□□ 1.07
PRAMEF2O60811 AC021242.3-201ENST00000607598 1377 ntBASIC21.71■■□□□ 1.07
PRAMEF2O60811 SHD-201ENST00000543264 2577 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
PRAMEF2O60811 TMEM51-205ENST00000434578 1861 ntTSL 1 (best) BASIC21.71■■□□□ 1.07
PRAMEF2O60811 EED-207ENST00000528180 1745 ntTSL 5 BASIC21.7■■□□□ 1.06
PRAMEF2O60811 MROH6-202ENST00000524906 1794 ntAPPRIS ALT2 TSL 3 BASIC21.7■■□□□ 1.06
PRAMEF2O60811 AC092849.1-201ENST00000475250 303 ntTSL 4 BASIC21.7■■□□□ 1.06
PRAMEF2O60811 UNC93B8-201ENST00000511903 705 ntBASIC21.7■■□□□ 1.06
PRAMEF2O60811 MIR4281-201ENST00000580852 62 ntBASIC21.7■■□□□ 1.06
PRAMEF2O60811 ADAD2-202ENST00000315906 1995 ntAPPRIS ALT2 TSL 1 (best) BASIC21.7■■□□□ 1.06
PRAMEF2O60811 FANCE-201ENST00000229769 2554 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
PRAMEF2O60811 AC113189.4-201ENST00000575331 5553 ntTSL 1 (best) BASIC21.7■■□□□ 1.06
PRAMEF2O60811 CACNG6-203ENST00000352529 1635 ntTSL 5 BASIC21.69■■□□□ 1.06
PRAMEF2O60811 KAT5-208ENST00000530446 1697 ntTSL 1 (best) BASIC21.69■■□□□ 1.06
PRAMEF2O60811 SLC52A2-202ENST00000402965 1777 ntAPPRIS P1 TSL 2 BASIC21.69■■□□□ 1.06
PRAMEF2O60811 ZNF641-205ENST00000547026 1823 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
PRAMEF2O60811 DGCR6-208ENST00000608842 1837 ntTSL 2 BASIC21.69■■□□□ 1.06
Retrieved 100 of 98,524 protein–RNA pairs in 34.4 ms