Protein–RNA interactions for Protein: O60568

PLOD3, Procollagen-lysine,2-oxoglutarate 5-dioxygenase 3, humanhuman

Predictions only

Length 738 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PLOD3O60568 AC010980.1-201ENST00000587192 1142 ntBASIC21.8■■□□□ 1.08
PLOD3O60568 NR6A1-201ENST00000344523 1846 ntAPPRIS ALT2 TSL 5 BASIC21.8■■□□□ 1.08
PLOD3O60568 TSEN34-201ENST00000302937 2294 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
PLOD3O60568 IRX4-202ENST00000505790 2538 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
PLOD3O60568 BEX3-202ENST00000372634 753 ntTSL 2 BASIC21.79■■□□□ 1.08
PLOD3O60568 C5orf38-202ENST00000397835 681 ntAPPRIS ALT2 TSL 5 BASIC21.79■■□□□ 1.08
PLOD3O60568 CDCA5-202ENST00000404147 1012 ntTSL 2 BASIC21.79■■□□□ 1.08
PLOD3O60568 ILDR2-208ENST00000529387 1238 ntTSL 5 BASIC21.79■■□□□ 1.08
PLOD3O60568 BDH1-207ENST00000441275 1605 ntTSL 5 BASIC21.79■■□□□ 1.08
PLOD3O60568 DAZAP1-205ENST00000587079 2086 ntAPPRIS ALT1 TSL 5 BASIC21.79■■□□□ 1.08
PLOD3O60568 ATP5G2-208ENST00000552242 1950 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
PLOD3O60568 KLF15-201ENST00000296233 2574 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
PLOD3O60568 MSX2-201ENST00000239243 2241 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
PLOD3O60568 AC011551.1-201ENST00000614101 683 ntBASIC21.78■■□□□ 1.08
PLOD3O60568 AZIN2-201ENST00000294517 2182 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
PLOD3O60568 GNB1-210ENST00000615252 3048 ntTSL 5 BASIC21.77■■□□□ 1.08
PLOD3O60568 SLC22A31-206ENST00000614943 1860 ntTSL 5 BASIC21.77■■□□□ 1.08
PLOD3O60568 PFN2-210ENST00000481767 1620 ntTSL 2 BASIC21.77■■□□□ 1.08
PLOD3O60568 CLEC2L-201ENST00000422142 1359 ntAPPRIS P2 TSL 3 BASIC21.77■■□□□ 1.08
PLOD3O60568 R3HDM4-203ENST00000587975 1765 ntTSL 3 BASIC21.77■■□□□ 1.08
PLOD3O60568 SYNGR3-201ENST00000248121 2051 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
PLOD3O60568 FAM162B-201ENST00000368557 1036 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
PLOD3O60568 RASGRP2-204ENST00000377487 642 ntTSL 2 BASIC21.77■■□□□ 1.08
PLOD3O60568 ENHO-201ENST00000399775 1082 ntAPPRIS P1 TSL 2 BASIC21.77■■□□□ 1.08
PLOD3O60568 HAGHL-205ENST00000561546 1041 ntTSL 2 BASIC21.77■■□□□ 1.08
PLOD3O60568 NDEL1-219ENST00000585098 454 ntTSL 3 BASIC21.77■■□□□ 1.08
PLOD3O60568 LINC01970-201ENST00000581489 1810 ntTSL 1 (best) BASIC21.77■■□□□ 1.08
PLOD3O60568 MOB4-204ENST00000409360 1447 ntTSL 5 BASIC21.77■■□□□ 1.08
PLOD3O60568 MADCAM1-202ENST00000346144 1309 ntAPPRIS ALT2 TSL 1 (best) BASIC21.77■■□□□ 1.07
PLOD3O60568 PAOX-206ENST00000480071 1324 ntTSL 1 (best) BASIC21.77■■□□□ 1.07
PLOD3O60568 ARL2-SNX15-201ENST00000301886 2392 ntAPPRIS P1 TSL 2 BASIC21.76■■□□□ 1.07
PLOD3O60568 TMEM185A-208ENST00000611119 2662 ntTSL 2 BASIC21.76■■□□□ 1.07
PLOD3O60568 AC145124.1-201ENST00000528514 1361 ntTSL 2 BASIC21.76■■□□□ 1.07
PLOD3O60568 FOXO1-201ENST00000379561 5735 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
PLOD3O60568 EHBP1L1-201ENST00000309295 5185 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
PLOD3O60568 ZC3H14-202ENST00000302216 2560 ntTSL 1 (best) BASIC21.76■■□□□ 1.07
PLOD3O60568 ST7-201ENST00000265437 2899 ntTSL 1 (best) BASIC21.76■■□□□ 1.07
PLOD3O60568 MZT2B-201ENST00000281871 933 ntAPPRIS P3 TSL 1 (best) BASIC21.76■■□□□ 1.07
PLOD3O60568 MZT2A-201ENST00000309451 624 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
PLOD3O60568 PICALM-202ENST00000393346 2340 ntAPPRIS P3 TSL 1 (best) BASIC21.76■■□□□ 1.07
PLOD3O60568 ZNF503-AS2-201ENST00000425916 2026 ntTSL 1 (best) BASIC21.76■■□□□ 1.07
PLOD3O60568 QDPR-202ENST00000428702 1278 ntTSL 2 BASIC21.76■■□□□ 1.07
PLOD3O60568 ADGRB1-202ENST00000517894 6241 ntAPPRIS P1 TSL 5 BASIC21.76■■□□□ 1.07
PLOD3O60568 ABHD17C-201ENST00000258884 2368 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
PLOD3O60568 PREB-202ENST00000406567 1910 ntTSL 5 BASIC21.76■■□□□ 1.07
PLOD3O60568 AC006455.5-202ENST00000615248 2284 ntTSL 1 (best) BASIC21.76■■□□□ 1.07
PLOD3O60568 GJC1-209ENST00000592524 1837 ntAPPRIS P1 TSL 2 BASIC21.76■■□□□ 1.07
PLOD3O60568 SLIT1-203ENST00000371041 1695 ntTSL 2 BASIC21.75■■□□□ 1.07
PLOD3O60568 HLA-L-211ENST00000482052 1765 ntBASIC21.75■■□□□ 1.07
PLOD3O60568 PROSER2-202ENST00000379200 1232 ntAPPRIS ALT2 BASIC21.75■■□□□ 1.07
PLOD3O60568 MRPL23-202ENST00000381519 643 ntAPPRIS P1 TSL 3 BASIC21.75■■□□□ 1.07
PLOD3O60568 MRPL23-205ENST00000397298 736 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
PLOD3O60568 CT47A7-201ENST00000434883 1288 ntAPPRIS P1 TSL 2 BASIC21.75■■□□□ 1.07
PLOD3O60568 CACNA1H-202ENST00000358590 8069 ntAPPRIS ALT2 TSL 5 BASIC21.75■■□□□ 1.07
PLOD3O60568 MYO10-205ENST00000507288 1677 ntTSL 1 (best) BASIC21.75■■□□□ 1.07
PLOD3O60568 KAT5-208ENST00000530446 1697 ntTSL 1 (best) BASIC21.75■■□□□ 1.07
PLOD3O60568 CTDSPL-206ENST00000443503 4640 ntAPPRIS ALT1 TSL 1 (best) BASIC21.75■■□□□ 1.07
PLOD3O60568 VDAC2-203ENST00000332211 1557 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
PLOD3O60568 GP1BB-201ENST00000366425 1553 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
PLOD3O60568 PTRH1-205ENST00000423807 1570 ntTSL 2 BASIC21.74■■□□□ 1.07
PLOD3O60568 SLBP-206ENST00000489418 1977 ntAPPRIS P2 TSL 1 (best) BASIC21.74■■□□□ 1.07
PLOD3O60568 ADIPOR1-201ENST00000340990 2177 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
PLOD3O60568 MRPL4-207ENST00000590669 1423 ntTSL 1 (best) BASIC21.74■■□□□ 1.07
PLOD3O60568 SEC11C-204ENST00000587834 1202 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
PLOD3O60568 RUNX2-210ENST00000576263 2256 ntTSL 5 BASIC21.74■■□□□ 1.07
PLOD3O60568 LINC01124-201ENST00000409786 2117 ntBASIC21.74■■□□□ 1.07
PLOD3O60568 HSPBP1-201ENST00000255631 1768 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
PLOD3O60568 MROH6-202ENST00000524906 1794 ntAPPRIS ALT2 TSL 3 BASIC21.74■■□□□ 1.07
PLOD3O60568 PLEKHA8-202ENST00000396257 1907 ntTSL 1 (best) BASIC21.73■■□□□ 1.07
PLOD3O60568 R3HCC1-202ENST00000411463 1467 ntAPPRIS P5 TSL 5 BASIC21.73■■□□□ 1.07
PLOD3O60568 FZD8-201ENST00000374694 4030 ntAPPRIS P1 BASIC21.73■■□□□ 1.07
PLOD3O60568 MIR4508-201ENST00000584178 70 ntBASIC21.73■■□□□ 1.07
PLOD3O60568 CNN3-202ENST00000394202 1974 ntTSL 2 BASIC21.73■■□□□ 1.07
PLOD3O60568 ZNRF1-201ENST00000320619 2479 ntTSL 1 (best) BASIC21.73■■□□□ 1.07
PLOD3O60568 CITED4-201ENST00000372638 1316 ntAPPRIS P1 BASIC21.73■■□□□ 1.07
PLOD3O60568 AC141586.4-201ENST00000624558 1573 ntBASIC21.73■■□□□ 1.07
PLOD3O60568 LINC00543-201ENST00000567234 1845 ntBASIC21.73■■□□□ 1.07
PLOD3O60568 TSEN54-201ENST00000333213 1944 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
PLOD3O60568 NPTXR-201ENST00000333039 5784 ntAPPRIS ALT2 TSL 1 (best) BASIC21.72■■□□□ 1.07
PLOD3O60568 AGBL5-201ENST00000323064 2382 ntAPPRIS ALT2 TSL 1 (best) BASIC21.72■■□□□ 1.07
PLOD3O60568 FAM124A-204ENST00000615498 2383 ntTSL 1 (best) BASIC21.72■■□□□ 1.07
PLOD3O60568 CDH23-206ENST00000398842 1759 ntTSL 5 BASIC21.71■■□□□ 1.07
PLOD3O60568 KRT10-201ENST00000269576 2124 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
PLOD3O60568 GADD45A-202ENST00000370986 1496 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
PLOD3O60568 CIRBP-216ENST00000588090 1459 ntAPPRIS P3 TSL 3 BASIC21.71■■□□□ 1.07
PLOD3O60568 MATK-204ENST00000585778 1994 ntAPPRIS ALT2 TSL 1 (best) BASIC21.71■■□□□ 1.07
PLOD3O60568 KRT18P24-201ENST00000344739 1156 ntBASIC21.71■■□□□ 1.07
PLOD3O60568 NAXE-203ENST00000368235 1125 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
PLOD3O60568 NEURL1B-203ENST00000522853 1263 ntTSL 1 (best) BASIC21.71■■□□□ 1.07
PLOD3O60568 PKNOX2-AS1-201ENST00000532316 586 ntTSL 3 BASIC21.71■■□□□ 1.07
PLOD3O60568 MMP25-AS1-209ENST00000576250 779 ntTSL 5 BASIC21.71■■□□□ 1.07
PLOD3O60568 ESR2-202ENST00000341099 2060 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
PLOD3O60568 SYT7-203ENST00000539008 2061 ntTSL 5 BASIC21.71■■□□□ 1.07
PLOD3O60568 DOK3-205ENST00000501403 1872 ntAPPRIS P1 TSL 5 BASIC21.71■■□□□ 1.07
PLOD3O60568 GOLGA7-201ENST00000357743 2027 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
PLOD3O60568 RNF19B-203ENST00000373456 2560 ntAPPRIS P3 TSL 1 (best) BASIC21.7■■□□□ 1.06
PLOD3O60568 CD63-201ENST00000257857 1070 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
PLOD3O60568 AC078883.1-201ENST00000442417 950 ntTSL 3 BASIC21.7■■□□□ 1.06
PLOD3O60568 FAM173A-202ENST00000564000 1088 ntAPPRIS ALT2 TSL 2 BASIC21.7■■□□□ 1.06
PLOD3O60568 TXNRD2-201ENST00000334363 1893 ntTSL 1 (best) BASIC21.7■■□□□ 1.06
Retrieved 100 of 98,524 protein–RNA pairs in 34.2 ms