Protein–RNA interactions for Protein: O43924

PDE6D, Retinal rod rhodopsin-sensitive cGMP 3',5'-cyclic phosphodiesterase subunit delta, humanhuman

Predictions only

Length 150 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDE6DO43924 ARTN-204ENST00000438616 889 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
PDE6DO43924 AC092755.2-201ENST00000560199 402 ntTSL 3 BASIC17.98■□□□□ 0.47
PDE6DO43924 VEGFA-226ENST00000611736 1239 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
PDE6DO43924 MMP24-201ENST00000246186 4414 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
PDE6DO43924 TRIM14-203ENST00000375098 1792 ntAPPRIS P1 TSL 2 BASIC17.98■□□□□ 0.47
PDE6DO43924 DOK1-203ENST00000409429 1955 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
PDE6DO43924 HMCES-204ENST00000502878 1952 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
PDE6DO43924 PRODH-203ENST00000357068 2462 ntAPPRIS P3 TSL 1 (best) BASIC17.98■□□□□ 0.47
PDE6DO43924 ODC1-201ENST00000234111 2653 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
PDE6DO43924 EEF1D-256ENST00000618139 2238 ntTSL 5 BASIC17.98■□□□□ 0.47
PDE6DO43924 FAM72A-202ENST00000367128 2398 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
PDE6DO43924 FAM72D-201ENST00000400889 2397 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
PDE6DO43924 ADSSL1-202ENST00000332972 1969 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
PDE6DO43924 TTC39A-203ENST00000371747 1876 ntTSL 2 BASIC17.97■□□□□ 0.47
PDE6DO43924 SPATA2L-201ENST00000289805 2335 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
PDE6DO43924 CDC16-203ENST00000356221 2203 ntAPPRIS P3 TSL 1 (best) BASIC17.97■□□□□ 0.47
PDE6DO43924 P4HA3-202ENST00000427714 2248 ntTSL 2 BASIC17.97■□□□□ 0.47
PDE6DO43924 TRIM3-201ENST00000345851 2879 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
PDE6DO43924 WRNIP1-204ENST00000380773 2670 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
PDE6DO43924 B3GNT4-201ENST00000324189 1642 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
PDE6DO43924 SUGCT-201ENST00000335693 1645 ntAPPRIS ALT2 TSL 1 (best) BASIC17.97■□□□□ 0.47
PDE6DO43924 LINC00526-201ENST00000581067 1875 ntBASIC17.97■□□□□ 0.47
PDE6DO43924 VGLL2-201ENST00000326274 2212 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
PDE6DO43924 TMEM259-201ENST00000333175 2581 ntAPPRIS P3 TSL 1 (best) BASIC17.96■□□□□ 0.47
PDE6DO43924 TBC1D12-201ENST00000225235 5272 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
PDE6DO43924 MAP3K3-201ENST00000361357 4818 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
PDE6DO43924 IQSEC3-201ENST00000382841 2701 ntAPPRIS P3 TSL 2 BASIC17.96■□□□□ 0.47
PDE6DO43924 CRTC2-203ENST00000368633 2644 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
PDE6DO43924 ADPRHL2-201ENST00000373178 1668 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
PDE6DO43924 COL15A1-205ENST00000610452 5422 ntAPPRIS ALT2 TSL 5 BASIC17.96■□□□□ 0.46
PDE6DO43924 OSCAR-207ENST00000391761 1826 ntAPPRIS ALT2 TSL 1 (best) BASIC17.95■□□□□ 0.46
PDE6DO43924 KRT72-203ENST00000537672 1813 ntAPPRIS P1 TSL 2 BASIC17.95■□□□□ 0.46
PDE6DO43924 WRNIP1-203ENST00000380771 2595 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
PDE6DO43924 EYA2-203ENST00000357410 2465 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
PDE6DO43924 KISS1R-201ENST00000234371 1625 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
PDE6DO43924 HABP4-201ENST00000375249 2615 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
PDE6DO43924 MYO1C-203ENST00000438665 4898 ntAPPRIS ALT1 TSL 5 BASIC17.95■□□□□ 0.46
PDE6DO43924 AKT2-234ENST00000579047 2029 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
PDE6DO43924 AP000251.1-201ENST00000433071 822 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
PDE6DO43924 CPE-201ENST00000402744 2421 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
PDE6DO43924 NHLH1-201ENST00000302101 2563 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
PDE6DO43924 MTCL1-201ENST00000306329 5718 ntAPPRIS ALT2 TSL 5 BASIC17.95■□□□□ 0.46
PDE6DO43924 PLEKHO1-202ENST00000369126 1809 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
PDE6DO43924 KCNIP2-206ENST00000356640 1989 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
PDE6DO43924 ST3GAL5-214ENST00000638178 2034 ntTSL 5 BASIC17.94■□□□□ 0.46
PDE6DO43924 SH3RF3-201ENST00000309415 5803 ntAPPRIS P1 TSL 5 BASIC17.94■□□□□ 0.46
PDE6DO43924 PPP2R3B-202ENST00000390665 2151 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
PDE6DO43924 FKBP8-209ENST00000597960 1781 ntAPPRIS P3 TSL 5 BASIC17.94■□□□□ 0.46
PDE6DO43924 KEAP1-202ENST00000393623 2648 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
PDE6DO43924 ACBD4-214ENST00000591859 1998 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
PDE6DO43924 ZNF843-201ENST00000315678 2137 ntAPPRIS P2 TSL 2 BASIC17.94■□□□□ 0.46
PDE6DO43924 RUNX1-205ENST00000399240 1590 ntTSL 3 BASIC17.94■□□□□ 0.46
PDE6DO43924 LRRC45-201ENST00000306688 2701 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
PDE6DO43924 ARHGAP5-203ENST00000396582 5786 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
PDE6DO43924 GNB2-203ENST00000393926 1641 ntAPPRIS P1 TSL 5 BASIC17.94■□□□□ 0.46
PDE6DO43924 TMEM200B-201ENST00000420504 2553 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
PDE6DO43924 SCN1B-201ENST00000262631 1670 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
PDE6DO43924 GRIK4-205ENST00000527524 5861 ntAPPRIS P1 TSL 2 BASIC17.93■□□□□ 0.46
PDE6DO43924 PGAM5-201ENST00000317555 1182 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
PDE6DO43924 TM6SF1-204ENST00000379390 1638 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
PDE6DO43924 POU2F3-206ENST00000543440 1953 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
PDE6DO43924 NPHS2-202ENST00000367616 1670 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
PDE6DO43924 NEK6-214ENST00000545174 2573 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
PDE6DO43924 DNAAF3-203ENST00000524407 2059 ntAPPRIS ALT2 TSL 1 (best) BASIC17.92■□□□□ 0.46
PDE6DO43924 NFIX-203ENST00000397661 3143 ntTSL 5 BASIC17.92■□□□□ 0.46
PDE6DO43924 PRSS41-201ENST00000399677 1127 ntAPPRIS P1 TSL 5 BASIC17.92■□□□□ 0.46
PDE6DO43924 ECI1-203ENST00000562238 948 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
PDE6DO43924 SUZ12P1-203ENST00000578195 985 ntBASIC17.92■□□□□ 0.46
PDE6DO43924 TMEM200B-202ENST00000521452 2501 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
PDE6DO43924 UBTF-213ENST00000533177 3011 ntTSL 5 BASIC17.91■□□□□ 0.46
PDE6DO43924 LGR4-202ENST00000389858 5163 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
PDE6DO43924 TMEM121B-201ENST00000331437 4954 ntAPPRIS P3 BASIC17.91■□□□□ 0.46
PDE6DO43924 MAP3K21-203ENST00000366624 5809 ntAPPRIS P2 TSL 1 (best) BASIC17.91■□□□□ 0.46
PDE6DO43924 FGF20-201ENST00000180166 1688 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
PDE6DO43924 MYO10-205ENST00000507288 1677 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
PDE6DO43924 VAX2-201ENST00000234392 1147 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
PDE6DO43924 MTMR14-202ENST00000351233 2105 ntAPPRIS ALT2 TSL 1 (best) BASIC17.91■□□□□ 0.46
PDE6DO43924 AC231981.1-201ENST00000450917 974 ntTSL 3 BASIC17.91■□□□□ 0.46
PDE6DO43924 HAS1-202ENST00000540069 2110 ntAPPRIS ALT2 TSL 1 (best) BASIC17.91■□□□□ 0.46
PDE6DO43924 PLEKHA8-208ENST00000622102 2140 ntTSL 5 BASIC17.91■□□□□ 0.46
PDE6DO43924 CREG1-201ENST00000370509 1974 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
PDE6DO43924 NKX6-2-201ENST00000368592 2673 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
PDE6DO43924 VGF-202ENST00000445482 2477 ntAPPRIS P1 TSL 5 BASIC17.91■□□□□ 0.46
PDE6DO43924 TERF2-201ENST00000254942 2983 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
PDE6DO43924 NR5A1-204ENST00000620110 2975 ntTSL 5 BASIC17.91■□□□□ 0.46
PDE6DO43924 RASSF10-201ENST00000529419 2530 ntAPPRIS P1 BASIC17.91■□□□□ 0.46
PDE6DO43924 TDRKH-205ENST00000368827 2318 ntAPPRIS P2 TSL 1 (best) BASIC17.9■□□□□ 0.46
PDE6DO43924 PPT2-248ENST00000395523 2111 ntAPPRIS ALT2 TSL 5 BASIC17.9■□□□□ 0.46
PDE6DO43924 ITGB3-202ENST00000571680 1668 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
PDE6DO43924 SEPT4-205ENST00000426861 1906 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
PDE6DO43924 B3GALNT2-202ENST00000366600 2015 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
PDE6DO43924 HLA-L-211ENST00000482052 1765 ntBASIC17.9■□□□□ 0.46
PDE6DO43924 SCAMP3-202ENST00000355379 1537 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
PDE6DO43924 FBRS-202ENST00000356166 5200 ntTSL 5 BASIC17.9■□□□□ 0.46
PDE6DO43924 GNB2-201ENST00000303210 1878 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
PDE6DO43924 NIPSNAP2-201ENST00000322090 1999 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
PDE6DO43924 SARDH-203ENST00000371868 2266 ntTSL 2 BASIC17.89■□□□□ 0.46
PDE6DO43924 MEIOB-202ENST00000397344 1792 ntTSL 5 BASIC17.89■□□□□ 0.45
PDE6DO43924 SLC25A29-201ENST00000359232 2385 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
PDE6DO43924 ARL2BP-201ENST00000219204 2130 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
Retrieved 100 of 98,524 protein–RNA pairs in 12 ms