Protein–RNA interactions for Protein: O43508

TNFSF12, Tumor necrosis factor ligand superfamily member 12, humanhuman

Predictions only

Length 249 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TNFSF12O43508 FOXO6-202ENST00000641094 1476 ntAPPRIS P1 BASIC19.25■□□□□ 0.67
TNFSF12O43508 MIR6089-201ENST00000616698 64 ntBASIC19.25■□□□□ 0.67
TNFSF12O43508 PAPOLA-225ENST00000557471 1421 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
TNFSF12O43508 IQCJ-SCHIP1-201ENST00000412423 2067 ntAPPRIS ALT2 TSL 1 (best) BASIC19.24■□□□□ 0.67
TNFSF12O43508 FMR1-208ENST00000440235 4271 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
TNFSF12O43508 RBPMS2-201ENST00000300069 2008 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
TNFSF12O43508 CNTFR-201ENST00000351266 1910 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
TNFSF12O43508 RP9P-202ENST00000450133 1212 ntBASIC19.24■□□□□ 0.67
TNFSF12O43508 CPSF4-207ENST00000451876 1644 ntTSL 5 BASIC19.24■□□□□ 0.67
TNFSF12O43508 STIM2-204ENST00000467087 5154 ntAPPRIS ALT2 TSL 1 (best) BASIC19.24■□□□□ 0.67
TNFSF12O43508 CEBPB-AS1-201ENST00000613921 2648 ntTSL 3 BASIC19.23■□□□□ 0.67
TNFSF12O43508 KCNMA1-209ENST00000372443 5059 ntAPPRIS ALT2 TSL 5 BASIC19.23■□□□□ 0.67
TNFSF12O43508 CAPNS1-216ENST00000628306 1389 ntTSL 5 BASIC19.23■□□□□ 0.67
TNFSF12O43508 PRMT5-213ENST00000553897 1857 ntTSL 2 BASIC19.23■□□□□ 0.67
TNFSF12O43508 PVT1-219ENST00000523427 938 ntTSL 3 BASIC19.23■□□□□ 0.67
TNFSF12O43508 AC093536.1-201ENST00000569153 554 ntBASIC19.23■□□□□ 0.67
TNFSF12O43508 AC022413.1-201ENST00000624602 984 ntBASIC19.23■□□□□ 0.67
TNFSF12O43508 CCND3-223ENST00000616010 2047 ntTSL 5 BASIC19.23■□□□□ 0.67
TNFSF12O43508 DACT3-201ENST00000300875 2526 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
TNFSF12O43508 ARID1B-220ENST00000636930 8246 ntAPPRIS ALT2 TSL 2 BASIC19.23■□□□□ 0.67
TNFSF12O43508 WTAP-207ENST00000631126 1430 ntTSL 3 BASIC19.23■□□□□ 0.67
TNFSF12O43508 RNF223-201ENST00000453464 1902 ntAPPRIS P1 TSL 2 BASIC19.23■□□□□ 0.67
TNFSF12O43508 LTB4R2-205ENST00000543919 1560 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
TNFSF12O43508 C3orf80-201ENST00000326474 2718 ntAPPRIS P1 BASIC19.23■□□□□ 0.67
TNFSF12O43508 PCSK6-220ENST00000622483 3132 ntAPPRIS ALT2 TSL 1 (best) BASIC19.23■□□□□ 0.67
TNFSF12O43508 AC109460.3-201ENST00000569969 5296 ntTSL 2 BASIC19.22■□□□□ 0.67
TNFSF12O43508 SLC39A2-201ENST00000298681 1379 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
TNFSF12O43508 HLA-L-211ENST00000482052 1765 ntBASIC19.22■□□□□ 0.67
TNFSF12O43508 OBSL1-214ENST00000603926 5520 ntTSL 5 BASIC19.22■□□□□ 0.67
TNFSF12O43508 TMEM114-202ENST00000568335 899 ntTSL 3 BASIC19.22■□□□□ 0.67
TNFSF12O43508 ADARB1-205ENST00000437626 5032 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
TNFSF12O43508 HOXA10-206ENST00000613671 2175 ntTSL 5 BASIC19.22■□□□□ 0.67
TNFSF12O43508 ARSB-202ENST00000396151 2316 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
TNFSF12O43508 BDH1-207ENST00000441275 1605 ntTSL 5 BASIC19.22■□□□□ 0.67
TNFSF12O43508 CACTIN-AS1-201ENST00000592274 1913 ntTSL 2 BASIC19.21■□□□□ 0.67
TNFSF12O43508 AK8-201ENST00000298545 2072 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
TNFSF12O43508 C18orf65-201ENST00000622985 2076 ntTSL 2 BASIC19.21■□□□□ 0.67
TNFSF12O43508 YWHAH-201ENST00000248975 1825 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
TNFSF12O43508 ARHGAP5-203ENST00000396582 5786 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
TNFSF12O43508 PELI3-201ENST00000320740 2740 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
TNFSF12O43508 DAZAP1-201ENST00000233078 2160 ntAPPRIS P2 TSL 1 (best) BASIC19.21■□□□□ 0.67
TNFSF12O43508 NXNL1-201ENST00000301944 946 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
TNFSF12O43508 ECEL1P2-201ENST00000461596 1295 ntBASIC19.21■□□□□ 0.67
TNFSF12O43508 ANGPTL6-203ENST00000589181 1579 ntTSL 5 BASIC19.21■□□□□ 0.67
TNFSF12O43508 RANBP10-206ENST00000602677 2374 ntTSL 5 BASIC19.21■□□□□ 0.67
TNFSF12O43508 GGH-201ENST00000260118 1607 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
TNFSF12O43508 FGF2-201ENST00000264498 6775 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
TNFSF12O43508 DTNB-211ENST00000407661 2420 ntAPPRIS ALT1 TSL 1 (best) BASIC19.21■□□□□ 0.67
TNFSF12O43508 KRT72-203ENST00000537672 1813 ntAPPRIS P1 TSL 2 BASIC19.21■□□□□ 0.67
TNFSF12O43508 MYO10-205ENST00000507288 1677 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
TNFSF12O43508 MSRB1-206ENST00000622125 1363 ntAPPRIS ALT1 TSL 5 BASIC19.2■□□□□ 0.66
TNFSF12O43508 IRX5-201ENST00000320990 2061 ntAPPRIS ALT1 TSL 1 (best) BASIC19.2■□□□□ 0.66
TNFSF12O43508 AC068473.5-201ENST00000616428 2072 ntBASIC19.2■□□□□ 0.66
TNFSF12O43508 KDM2A-202ENST00000398645 6511 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
TNFSF12O43508 PKIG-207ENST00000372894 1191 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
TNFSF12O43508 CEP120-209ENST00000515110 606 ntTSL 3 BASIC19.2■□□□□ 0.66
TNFSF12O43508 RPS2-202ENST00000526522 924 ntTSL 2 BASIC19.2■□□□□ 0.66
TNFSF12O43508 DTNB-201ENST00000288642 2464 ntAPPRIS ALT2 TSL 2 BASIC19.2■□□□□ 0.66
TNFSF12O43508 DTNB-208ENST00000406818 2474 ntAPPRIS P4 TSL 1 (best) BASIC19.2■□□□□ 0.66
TNFSF12O43508 AL137002.2-201ENST00000639766 2238 ntTSL 5 BASIC19.2■□□□□ 0.66
TNFSF12O43508 HOXD9-201ENST00000249499 1870 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
TNFSF12O43508 RBMXL2-201ENST00000306904 1874 ntAPPRIS P1 BASIC19.2■□□□□ 0.66
TNFSF12O43508 LDHB-203ENST00000396076 1538 ntAPPRIS P1 TSL 5 BASIC19.2■□□□□ 0.66
TNFSF12O43508 FUT11-201ENST00000372841 2056 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
TNFSF12O43508 RNASET2-210ENST00000508775 1375 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
TNFSF12O43508 PTH1R-207ENST00000449590 2123 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
TNFSF12O43508 HOXD1-201ENST00000331462 1975 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
TNFSF12O43508 ZBTB25-202ENST00000555220 1440 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
TNFSF12O43508 ATG16L2-205ENST00000534905 1614 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
TNFSF12O43508 FNDC11-204ENST00000615526 2954 ntAPPRIS P1 BASIC19.19■□□□□ 0.66
TNFSF12O43508 C16orf52-207ENST00000569656 1257 ntTSL 5 BASIC19.19■□□□□ 0.66
TNFSF12O43508 FAM43A-201ENST00000329759 2494 ntAPPRIS P1 BASIC19.19■□□□□ 0.66
TNFSF12O43508 SHD-204ENST00000599689 1729 ntTSL 5 BASIC19.19■□□□□ 0.66
TNFSF12O43508 WBP1-202ENST00000393972 1325 ntTSL 2 BASIC19.19■□□□□ 0.66
TNFSF12O43508 MMP24-201ENST00000246186 4414 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
TNFSF12O43508 RCCD1-206ENST00000556618 1556 ntAPPRIS P2 TSL 5 BASIC19.19■□□□□ 0.66
TNFSF12O43508 LSR-204ENST00000361790 2210 ntAPPRIS P4 TSL 1 (best) BASIC19.19■□□□□ 0.66
TNFSF12O43508 ZNF503-AS2-201ENST00000425916 2026 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
TNFSF12O43508 KLF9-201ENST00000377126 5175 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
TNFSF12O43508 KAT5-208ENST00000530446 1697 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
TNFSF12O43508 ALG1L9P-201ENST00000508969 2165 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
TNFSF12O43508 RPS6KA2-201ENST00000265678 5824 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
TNFSF12O43508 FAM107B-211ENST00000468747 2633 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
TNFSF12O43508 PFN2-210ENST00000481767 1620 ntTSL 2 BASIC19.18■□□□□ 0.66
TNFSF12O43508 KCNS1-202ENST00000537075 2136 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
TNFSF12O43508 CECR2-202ENST00000342247 6178 ntAPPRIS ALT2 TSL 5 BASIC19.18■□□□□ 0.66
TNFSF12O43508 ZSCAN18-212ENST00000600404 1934 ntAPPRIS ALT2 TSL 2 BASIC19.17■□□□□ 0.66
TNFSF12O43508 HOMER2-201ENST00000304231 1990 ntAPPRIS P4 TSL 5 BASIC19.17■□□□□ 0.66
TNFSF12O43508 ADSSL1-202ENST00000332972 1969 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
TNFSF12O43508 SLC39A3-201ENST00000269740 1502 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
TNFSF12O43508 DUSP8P5-201ENST00000422884 1815 ntBASIC19.17■□□□□ 0.66
TNFSF12O43508 MIR639-201ENST00000384974 98 ntBASIC19.17■□□□□ 0.66
TNFSF12O43508 VIPR2-204ENST00000421760 717 ntTSL 3 BASIC19.17■□□□□ 0.66
TNFSF12O43508 PKD1P6-201ENST00000343738 4769 ntBASIC19.16■□□□□ 0.66
TNFSF12O43508 KMT2B-201ENST00000420124 8469 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
TNFSF12O43508 CEBPD-201ENST00000408965 2178 ntAPPRIS P1 BASIC19.16■□□□□ 0.66
TNFSF12O43508 RYK-208ENST00000620660 2942 ntAPPRIS P3 TSL 1 (best) BASIC19.16■□□□□ 0.66
TNFSF12O43508 LTBP3-201ENST00000301873 4443 ntAPPRIS ALT2 TSL 2 BASIC19.16■□□□□ 0.66
TNFSF12O43508 CNNM1-201ENST00000356713 5959 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
TNFSF12O43508 ARL6IP4-208ENST00000439686 796 ntAPPRIS ALT2 TSL 3 BASIC19.16■□□□□ 0.66
Retrieved 100 of 98,524 protein–RNA pairs in 16.5 ms