Protein–RNA interactions for Protein: O43508

TNFSF12, Tumor necrosis factor ligand superfamily member 12, humanhuman

Predictions only

Length 249 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TNFSF12O43508 FOXO6-202ENST00000641094 1476 ntAPPRIS P1 BASIC19.25■□□□□ 0.67
TNFSF12O43508 MIR6089-201ENST00000616698 64 ntBASIC19.25■□□□□ 0.67
TNFSF12O43508 PAPOLA-225ENST00000557471 1421 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
TNFSF12O43508 IQCJ-SCHIP1-201ENST00000412423 2067 ntAPPRIS ALT2 TSL 1 (best) BASIC19.24■□□□□ 0.67
TNFSF12O43508 FMR1-208ENST00000440235 4271 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
TNFSF12O43508 RBPMS2-201ENST00000300069 2008 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
TNFSF12O43508 CNTFR-201ENST00000351266 1910 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
TNFSF12O43508 RP9P-202ENST00000450133 1212 ntBASIC19.24■□□□□ 0.67
TNFSF12O43508 CPSF4-207ENST00000451876 1644 ntTSL 5 BASIC19.24■□□□□ 0.67
TNFSF12O43508 STIM2-204ENST00000467087 5154 ntAPPRIS ALT2 TSL 1 (best) BASIC19.24■□□□□ 0.67
TNFSF12O43508 CEBPB-AS1-201ENST00000613921 2648 ntTSL 3 BASIC19.23■□□□□ 0.67
TNFSF12O43508 KCNMA1-209ENST00000372443 5059 ntAPPRIS ALT2 TSL 5 BASIC19.23■□□□□ 0.67
TNFSF12O43508 CAPNS1-216ENST00000628306 1389 ntTSL 5 BASIC19.23■□□□□ 0.67
TNFSF12O43508 PRMT5-213ENST00000553897 1857 ntTSL 2 BASIC19.23■□□□□ 0.67
TNFSF12O43508 PVT1-219ENST00000523427 938 ntTSL 3 BASIC19.23■□□□□ 0.67
TNFSF12O43508 AC093536.1-201ENST00000569153 554 ntBASIC19.23■□□□□ 0.67
TNFSF12O43508 AC022413.1-201ENST00000624602 984 ntBASIC19.23■□□□□ 0.67
TNFSF12O43508 CCND3-223ENST00000616010 2047 ntTSL 5 BASIC19.23■□□□□ 0.67
TNFSF12O43508 DACT3-201ENST00000300875 2526 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
TNFSF12O43508 ARID1B-220ENST00000636930 8246 ntAPPRIS ALT2 TSL 2 BASIC19.23■□□□□ 0.67
TNFSF12O43508 WTAP-207ENST00000631126 1430 ntTSL 3 BASIC19.23■□□□□ 0.67
TNFSF12O43508 RNF223-201ENST00000453464 1902 ntAPPRIS P1 TSL 2 BASIC19.23■□□□□ 0.67
TNFSF12O43508 LTB4R2-205ENST00000543919 1560 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
TNFSF12O43508 C3orf80-201ENST00000326474 2718 ntAPPRIS P1 BASIC19.23■□□□□ 0.67
TNFSF12O43508 PCSK6-220ENST00000622483 3132 ntAPPRIS ALT2 TSL 1 (best) BASIC19.23■□□□□ 0.67
TNFSF12O43508 AC109460.3-201ENST00000569969 5296 ntTSL 2 BASIC19.22■□□□□ 0.67
TNFSF12O43508 SLC39A2-201ENST00000298681 1379 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
TNFSF12O43508 HLA-L-211ENST00000482052 1765 ntBASIC19.22■□□□□ 0.67
TNFSF12O43508 OBSL1-214ENST00000603926 5520 ntTSL 5 BASIC19.22■□□□□ 0.67
TNFSF12O43508 TMEM114-202ENST00000568335 899 ntTSL 3 BASIC19.22■□□□□ 0.67
TNFSF12O43508 ADARB1-205ENST00000437626 5032 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
TNFSF12O43508 HOXA10-206ENST00000613671 2175 ntTSL 5 BASIC19.22■□□□□ 0.67
TNFSF12O43508 ARSB-202ENST00000396151 2316 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
TNFSF12O43508 BDH1-207ENST00000441275 1605 ntTSL 5 BASIC19.22■□□□□ 0.67
TNFSF12O43508 CACTIN-AS1-201ENST00000592274 1913 ntTSL 2 BASIC19.21■□□□□ 0.67
TNFSF12O43508 AK8-201ENST00000298545 2072 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
TNFSF12O43508 C18orf65-201ENST00000622985 2076 ntTSL 2 BASIC19.21■□□□□ 0.67
TNFSF12O43508 YWHAH-201ENST00000248975 1825 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
TNFSF12O43508 ARHGAP5-203ENST00000396582 5786 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
TNFSF12O43508 PELI3-201ENST00000320740 2740 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
TNFSF12O43508 DAZAP1-201ENST00000233078 2160 ntAPPRIS P2 TSL 1 (best) BASIC19.21■□□□□ 0.67
TNFSF12O43508 NXNL1-201ENST00000301944 946 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
TNFSF12O43508 ECEL1P2-201ENST00000461596 1295 ntBASIC19.21■□□□□ 0.67
TNFSF12O43508 ANGPTL6-203ENST00000589181 1579 ntTSL 5 BASIC19.21■□□□□ 0.67
TNFSF12O43508 RANBP10-206ENST00000602677 2374 ntTSL 5 BASIC19.21■□□□□ 0.67
TNFSF12O43508 GGH-201ENST00000260118 1607 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
TNFSF12O43508 FGF2-201ENST00000264498 6775 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
TNFSF12O43508 DTNB-211ENST00000407661 2420 ntAPPRIS ALT1 TSL 1 (best) BASIC19.21■□□□□ 0.67
TNFSF12O43508 KRT72-203ENST00000537672 1813 ntAPPRIS P1 TSL 2 BASIC19.21■□□□□ 0.67
TNFSF12O43508 MYO10-205ENST00000507288 1677 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
TNFSF12O43508 MSRB1-206ENST00000622125 1363 ntAPPRIS ALT1 TSL 5 BASIC19.2■□□□□ 0.66
TNFSF12O43508 IRX5-201ENST00000320990 2061 ntAPPRIS ALT1 TSL 1 (best) BASIC19.2■□□□□ 0.66
TNFSF12O43508 AC068473.5-201ENST00000616428 2072 ntBASIC19.2■□□□□ 0.66
TNFSF12O43508 KDM2A-202ENST00000398645 6511 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
TNFSF12O43508 PKIG-207ENST00000372894 1191 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
TNFSF12O43508 CEP120-209ENST00000515110 606 ntTSL 3 BASIC19.2■□□□□ 0.66
TNFSF12O43508 RPS2-202ENST00000526522 924 ntTSL 2 BASIC19.2■□□□□ 0.66
TNFSF12O43508 DTNB-201ENST00000288642 2464 ntAPPRIS ALT2 TSL 2 BASIC19.2■□□□□ 0.66
TNFSF12O43508 DTNB-208ENST00000406818 2474 ntAPPRIS P4 TSL 1 (best) BASIC19.2■□□□□ 0.66
TNFSF12O43508 AL137002.2-201ENST00000639766 2238 ntTSL 5 BASIC19.2■□□□□ 0.66
TNFSF12O43508 HOXD9-201ENST00000249499 1870 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
TNFSF12O43508 RBMXL2-201ENST00000306904 1874 ntAPPRIS P1 BASIC19.2■□□□□ 0.66
TNFSF12O43508 LDHB-203ENST00000396076 1538 ntAPPRIS P1 TSL 5 BASIC19.2■□□□□ 0.66
TNFSF12O43508 FUT11-201ENST00000372841 2056 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
TNFSF12O43508 RNASET2-210ENST00000508775 1375 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
TNFSF12O43508 PTH1R-207ENST00000449590 2123 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
TNFSF12O43508 HOXD1-201ENST00000331462 1975 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
TNFSF12O43508 ZBTB25-202ENST00000555220 1440 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
TNFSF12O43508 ATG16L2-205ENST00000534905 1614 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
TNFSF12O43508 FNDC11-204ENST00000615526 2954 ntAPPRIS P1 BASIC19.19■□□□□ 0.66
TNFSF12O43508 C16orf52-207ENST00000569656 1257 ntTSL 5 BASIC19.19■□□□□ 0.66
TNFSF12O43508 FAM43A-201ENST00000329759 2494 ntAPPRIS P1 BASIC19.19■□□□□ 0.66
TNFSF12O43508 SHD-204ENST00000599689 1729 ntTSL 5 BASIC19.19■□□□□ 0.66
TNFSF12O43508 WBP1-202ENST00000393972 1325 ntTSL 2 BASIC19.19■□□□□ 0.66
TNFSF12O43508 MMP24-201ENST00000246186 4414 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
TNFSF12O43508 RCCD1-206ENST00000556618 1556 ntAPPRIS P2 TSL 5 BASIC19.19■□□□□ 0.66
TNFSF12O43508 LSR-204ENST00000361790 2210 ntAPPRIS P4 TSL 1 (best) BASIC19.19■□□□□ 0.66
TNFSF12O43508 ZNF503-AS2-201ENST00000425916 2026 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
TNFSF12O43508 KLF9-201ENST00000377126 5175 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
TNFSF12O43508 KAT5-208ENST00000530446 1697 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
TNFSF12O43508 ALG1L9P-201ENST00000508969 2165 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
TNFSF12O43508 RPS6KA2-201ENST00000265678 5824 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
TNFSF12O43508 FAM107B-211ENST00000468747 2633 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
TNFSF12O43508 PFN2-210ENST00000481767 1620 ntTSL 2 BASIC19.18■□□□□ 0.66
TNFSF12O43508 KCNS1-202ENST00000537075 2136 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
TNFSF12O43508 CECR2-202ENST00000342247 6178 ntAPPRIS ALT2 TSL 5 BASIC19.18■□□□□ 0.66
TNFSF12O43508 ZSCAN18-212ENST00000600404 1934 ntAPPRIS ALT2 TSL 2 BASIC19.17■□□□□ 0.66
TNFSF12O43508 HOMER2-201ENST00000304231 1990 ntAPPRIS P4 TSL 5 BASIC19.17■□□□□ 0.66
TNFSF12O43508 ADSSL1-202ENST00000332972 1969 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
TNFSF12O43508 SLC39A3-201ENST00000269740 1502 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
TNFSF12O43508 DUSP8P5-201ENST00000422884 1815 ntBASIC19.17■□□□□ 0.66
TNFSF12O43508 MIR639-201ENST00000384974 98 ntBASIC19.17■□□□□ 0.66
TNFSF12O43508 VIPR2-204ENST00000421760 717 ntTSL 3 BASIC19.17■□□□□ 0.66
TNFSF12O43508 PKD1P6-201ENST00000343738 4769 ntBASIC19.16■□□□□ 0.66
TNFSF12O43508 KMT2B-201ENST00000420124 8469 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
TNFSF12O43508 CEBPD-201ENST00000408965 2178 ntAPPRIS P1 BASIC19.16■□□□□ 0.66
TNFSF12O43508 RYK-208ENST00000620660 2942 ntAPPRIS P3 TSL 1 (best) BASIC19.16■□□□□ 0.66
TNFSF12O43508 LTBP3-201ENST00000301873 4443 ntAPPRIS ALT2 TSL 2 BASIC19.16■□□□□ 0.66
TNFSF12O43508 CNNM1-201ENST00000356713 5959 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
TNFSF12O43508 ARL6IP4-208ENST00000439686 796 ntAPPRIS ALT2 TSL 3 BASIC19.16■□□□□ 0.66
Retrieved 100 of 98,524 protein–RNA pairs in 41.2 ms