Protein–RNA interactions for Protein: O15522

NKX2-8, Homeobox protein Nkx-2.8, humanhuman

Predictions only

Length 239 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NKX2-8O15522 FAM174B-207ENST00000555748 866 ntAPPRIS ALT2 TSL 3 BASIC21.67■■□□□ 1.06
NKX2-8O15522 SLC25A6-201ENST00000381401 2062 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
NKX2-8O15522 LINC00588-201ENST00000521663 1875 ntTSL 2 BASIC21.66■■□□□ 1.06
NKX2-8O15522 RCCD1-203ENST00000555155 1871 ntAPPRIS ALT1 TSL 5 BASIC21.66■■□□□ 1.06
NKX2-8O15522 TRIM14-203ENST00000375098 1792 ntAPPRIS P1 TSL 2 BASIC21.66■■□□□ 1.06
NKX2-8O15522 FBXL6-202ENST00000455319 1727 ntAPPRIS ALT2 TSL 1 (best) BASIC21.66■■□□□ 1.06
NKX2-8O15522 GMPPB-202ENST00000308388 1582 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
NKX2-8O15522 SYT8-201ENST00000341958 1556 ntAPPRIS ALT2 TSL 5 BASIC21.66■■□□□ 1.06
NKX2-8O15522 ADGRB2-204ENST00000398542 5176 ntTSL 5 BASIC21.66■■□□□ 1.06
NKX2-8O15522 IKBKG-211ENST00000615874 1460 ntTSL 5 BASIC21.65■■□□□ 1.06
NKX2-8O15522 IKBKG-215ENST00000619941 1463 ntTSL 5 BASIC21.65■■□□□ 1.06
NKX2-8O15522 DACT2-202ENST00000366796 2028 ntAPPRIS ALT2 TSL 1 (best) BASIC21.65■■□□□ 1.06
NKX2-8O15522 EVA1C-201ENST00000300255 1998 ntAPPRIS P3 TSL 1 (best) BASIC21.65■■□□□ 1.06
NKX2-8O15522 CCDC107-205ENST00000421582 1324 ntAPPRIS ALT2 TSL 2 BASIC21.65■■□□□ 1.06
NKX2-8O15522 P2RX4-203ENST00000359949 1836 ntTSL 5 BASIC21.65■■□□□ 1.06
NKX2-8O15522 FAIM-203ENST00000393034 927 ntAPPRIS P3 TSL 2 BASIC21.65■■□□□ 1.06
NKX2-8O15522 CROT-202ENST00000412227 1213 ntTSL 1 (best) BASIC21.65■■□□□ 1.06
NKX2-8O15522 AC004448.1-201ENST00000458332 883 ntBASIC21.65■■□□□ 1.06
NKX2-8O15522 KAT8-202ENST00000448516 1789 ntTSL 1 (best) BASIC21.65■■□□□ 1.06
NKX2-8O15522 MAPKAP1-207ENST00000394060 1586 ntTSL 1 (best) BASIC21.65■■□□□ 1.06
NKX2-8O15522 PNCK-215ENST00000447676 1585 ntTSL 2 BASIC21.65■■□□□ 1.06
NKX2-8O15522 C6orf89-201ENST00000355190 1309 ntAPPRIS P3 TSL 1 (best) BASIC21.64■■□□□ 1.05
NKX2-8O15522 STX10-202ENST00000343587 1128 ntTSL 1 (best) BASIC21.64■■□□□ 1.05
NKX2-8O15522 AC105265.2-201ENST00000467189 838 ntBASIC21.64■■□□□ 1.05
NKX2-8O15522 GRAMD4P4-201ENST00000613563 1115 ntBASIC21.64■■□□□ 1.05
NKX2-8O15522 AL136967.2-201ENST00000623968 743 ntBASIC21.64■■□□□ 1.05
NKX2-8O15522 SAC3D1-201ENST00000398846 1566 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.05
NKX2-8O15522 GADD45A-202ENST00000370986 1496 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.05
NKX2-8O15522 TWF2-201ENST00000305533 1718 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
NKX2-8O15522 REST-212ENST00000640343 1352 ntTSL 1 (best) BASIC21.63■■□□□ 1.05
NKX2-8O15522 AF213884.3-201ENST00000563833 479 ntBASIC21.63■■□□□ 1.05
NKX2-8O15522 TGFBR3L-202ENST00000565886 1260 ntAPPRIS P1 TSL 5 BASIC21.63■■□□□ 1.05
NKX2-8O15522 WFDC1-201ENST00000219454 1534 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
NKX2-8O15522 HMCES-204ENST00000502878 1952 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
NKX2-8O15522 NPHS2-202ENST00000367616 1670 ntTSL 1 (best) BASIC21.63■■□□□ 1.05
NKX2-8O15522 DNMT3A-206ENST00000406659 1775 ntTSL 1 (best) BASIC21.62■■□□□ 1.05
NKX2-8O15522 LAMTOR1-201ENST00000278671 1179 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
NKX2-8O15522 CCDC189-211ENST00000545825 1046 ntTSL 1 (best) BASIC21.62■■□□□ 1.05
NKX2-8O15522 MIR5787-201ENST00000611784 55 ntBASIC21.62■■□□□ 1.05
NKX2-8O15522 RASSF5-204ENST00000580449 1932 ntTSL 1 (best) BASIC21.61■■□□□ 1.05
NKX2-8O15522 HSPE1-203ENST00000409729 478 ntTSL 2 BASIC21.61■■□□□ 1.05
NKX2-8O15522 DPP10-AS1-201ENST00000432658 730 ntTSL 1 (best) BASIC21.61■■□□□ 1.05
NKX2-8O15522 SERGEF-219ENST00000532265 1124 ntTSL 2 BASIC21.61■■□□□ 1.05
NKX2-8O15522 GJD3-201ENST00000578689 885 ntAPPRIS P1 BASIC21.61■■□□□ 1.05
NKX2-8O15522 UBL7-202ENST00000395081 1427 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
NKX2-8O15522 AC112229.4-201ENST00000488671 1528 ntTSL 2 BASIC21.6■■□□□ 1.05
NKX2-8O15522 AC005703.6-201ENST00000623265 1329 ntBASIC21.6■■□□□ 1.05
NKX2-8O15522 FNDC4-201ENST00000264703 1657 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
NKX2-8O15522 GSX2-205ENST00000611459 1262 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
NKX2-8O15522 CHST13-201ENST00000319340 1789 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
NKX2-8O15522 MROH6-211ENST00000534459 1789 ntAPPRIS ALT2 TSL 2 BASIC21.6■■□□□ 1.05
NKX2-8O15522 PFKFB4-204ENST00000416568 1575 ntTSL 1 (best) BASIC21.6■■□□□ 1.05
NKX2-8O15522 MARCH2-201ENST00000215555 1376 ntAPPRIS P1 TSL 5 BASIC21.6■■□□□ 1.05
NKX2-8O15522 SDSL-201ENST00000345635 1397 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
NKX2-8O15522 ST6GALNAC6-203ENST00000373142 2448 ntTSL 1 (best) BASIC21.59■■□□□ 1.05
NKX2-8O15522 SIRT3-204ENST00000525319 1475 ntAPPRIS ALT2 TSL 2 BASIC21.59■■□□□ 1.05
NKX2-8O15522 SDS-201ENST00000257549 1606 ntAPPRIS P1 TSL 2 BASIC21.59■■□□□ 1.05
NKX2-8O15522 AKAP8L-208ENST00000595465 1933 ntTSL 2 BASIC21.59■■□□□ 1.05
NKX2-8O15522 SERF1A-202ENST00000354833 1889 ntTSL 1 (best) BASIC21.59■■□□□ 1.05
NKX2-8O15522 SERF1B-201ENST00000380750 1889 ntTSL 1 (best) BASIC21.59■■□□□ 1.05
NKX2-8O15522 GATA2-AS1-201ENST00000464242 1163 ntTSL 2 BASIC21.59■■□□□ 1.05
NKX2-8O15522 SERINC5-203ENST00000509193 1441 ntTSL 1 (best) BASIC21.59■■□□□ 1.05
NKX2-8O15522 STOX2-205ENST00000513034 807 ntTSL 3 BASIC21.59■■□□□ 1.05
NKX2-8O15522 AC104564.3-201ENST00000582367 638 ntBASIC21.59■■□□□ 1.05
NKX2-8O15522 TMIE-201ENST00000326431 1824 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
NKX2-8O15522 YRDC-201ENST00000373044 1826 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
NKX2-8O15522 ZNF747-203ENST00000568028 1511 ntAPPRIS P1 TSL 2 BASIC21.59■■□□□ 1.05
NKX2-8O15522 GLRX3-201ENST00000331244 1302 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.05
NKX2-8O15522 SHISA5-201ENST00000296444 2369 ntTSL 1 (best) BASIC21.58■■□□□ 1.05
NKX2-8O15522 MEIS1-AS3-201ENST00000454167 707 ntTSL 4 BASIC21.58■■□□□ 1.05
NKX2-8O15522 CAMTA1-208ENST00000473578 567 ntTSL 1 (best) BASIC21.58■■□□□ 1.05
NKX2-8O15522 DUX4L19-201ENST00000557448 1267 ntBASIC21.58■■□□□ 1.05
NKX2-8O15522 ARHGDIA-217ENST00000584461 886 ntTSL 2 BASIC21.58■■□□□ 1.05
NKX2-8O15522 BAG1-212ENST00000641048 1038 ntAPPRIS P3 BASIC21.58■■□□□ 1.05
NKX2-8O15522 HSF4-225ENST00000584272 1549 ntTSL 1 (best) BASIC21.58■■□□□ 1.04
NKX2-8O15522 LLGL2-202ENST00000375227 1374 ntTSL 1 (best) BASIC21.58■■□□□ 1.04
NKX2-8O15522 AUH-201ENST00000303617 1490 ntTSL 1 (best) BASIC21.58■■□□□ 1.04
NKX2-8O15522 EPCAM-201ENST00000263735 1724 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.04
NKX2-8O15522 PRADC1-201ENST00000258083 1083 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
NKX2-8O15522 MIR939-201ENST00000401314 82 ntBASIC21.57■■□□□ 1.04
NKX2-8O15522 RNF19B-201ENST00000235150 2334 ntAPPRIS ALT2 TSL 1 (best) BASIC21.57■■□□□ 1.04
NKX2-8O15522 DAZAP1-202ENST00000336761 2290 ntTSL 5 BASIC21.57■■□□□ 1.04
NKX2-8O15522 SYT6-210ENST00000641643 1587 ntBASIC21.57■■□□□ 1.04
NKX2-8O15522 NKAIN3-202ENST00000523211 1988 ntAPPRIS P1 TSL 2 BASIC21.56■■□□□ 1.04
NKX2-8O15522 STOML2-201ENST00000356493 1278 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
NKX2-8O15522 LBX2-202ENST00000377566 1186 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
NKX2-8O15522 EPDR1-202ENST00000423717 638 ntTSL 1 (best) BASIC21.56■■□□□ 1.04
NKX2-8O15522 VAMP2-204ENST00000488857 874 ntAPPRIS ALT1 TSL 3 BASIC21.56■■□□□ 1.04
NKX2-8O15522 AP001330.3-201ENST00000520123 633 ntBASIC21.56■■□□□ 1.04
NKX2-8O15522 TMEM218-209ENST00000529583 848 ntAPPRIS P1 TSL 3 BASIC21.56■■□□□ 1.04
NKX2-8O15522 ZNF641-205ENST00000547026 1823 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
NKX2-8O15522 RTN2-208ENST00000590526 2357 ntTSL 5 BASIC21.56■■□□□ 1.04
NKX2-8O15522 FZD2-201ENST00000315323 2112 ntAPPRIS P1 BASIC21.56■■□□□ 1.04
NKX2-8O15522 PKM-203ENST00000389093 2279 ntTSL 5 BASIC21.55■■□□□ 1.04
NKX2-8O15522 HADH-203ENST00000505878 1719 ntTSL 1 (best) BASIC21.55■■□□□ 1.04
NKX2-8O15522 BIN1-211ENST00000409400 2143 ntTSL 1 (best) BASIC21.55■■□□□ 1.04
NKX2-8O15522 BAD-203ENST00000394532 1157 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
NKX2-8O15522 RBM38-205ENST00000440234 686 ntTSL 2 BASIC21.55■■□□□ 1.04
NKX2-8O15522 FAM222B-213ENST00000583522 556 ntTSL 2 BASIC21.55■■□□□ 1.04
NKX2-8O15522 HOMER3-205ENST00000542541 1607 ntAPPRIS P3 TSL 1 (best) BASIC21.55■■□□□ 1.04
Retrieved 100 of 98,524 protein–RNA pairs in 35.8 ms