Protein–RNA interactions for Protein: O14983

ATP2A1, Sarcoplasmic/endoplasmic reticulum calcium ATPase 1, humanhuman

Predictions only

Length 1,001 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATP2A1O14983 MROH6-210ENST00000533679 1921 ntAPPRIS ALT2 TSL 1 (best) BASIC26.78■■□□□ 1.88
ATP2A1O14983 CALM1-203ENST00000544280 1064 ntTSL 1 (best) BASIC26.78■■□□□ 1.88
ATP2A1O14983 UBALD1-201ENST00000283474 1413 ntAPPRIS P1 TSL 1 (best) BASIC26.78■■□□□ 1.88
ATP2A1O14983 ELOC-206ENST00000520242 1573 ntAPPRIS P1 TSL 1 (best) BASIC26.78■■□□□ 1.88
ATP2A1O14983 GYG2-205ENST00000398806 1956 ntAPPRIS ALT2 TSL 1 (best) BASIC26.78■■□□□ 1.88
ATP2A1O14983 RRAS2-201ENST00000256196 1516 ntAPPRIS P1 TSL 1 (best) BASIC26.77■■□□□ 1.88
ATP2A1O14983 HES5-201ENST00000378453 1306 ntAPPRIS P1 TSL 1 (best) BASIC26.77■■□□□ 1.88
ATP2A1O14983 AC110285.6-201ENST00000617652 491 ntBASIC26.77■■□□□ 1.88
ATP2A1O14983 GPX4-213ENST00000622390 1002 ntTSL 5 BASIC26.77■■□□□ 1.88
ATP2A1O14983 HADH-203ENST00000505878 1719 ntTSL 1 (best) BASIC26.76■■□□□ 1.88
ATP2A1O14983 AC004448.1-201ENST00000458332 883 ntBASIC26.76■■□□□ 1.87
ATP2A1O14983 PTH1R-206ENST00000430002 1947 ntAPPRIS P1 TSL 1 (best) BASIC26.76■■□□□ 1.87
ATP2A1O14983 MFSD7-202ENST00000347950 1599 ntTSL 2 BASIC26.75■■□□□ 1.87
ATP2A1O14983 IKBKG-211ENST00000615874 1460 ntTSL 5 BASIC26.75■■□□□ 1.87
ATP2A1O14983 IKBKG-215ENST00000619941 1463 ntTSL 5 BASIC26.75■■□□□ 1.87
ATP2A1O14983 DLX2-202ENST00000466293 1852 ntTSL 2 BASIC26.75■■□□□ 1.87
ATP2A1O14983 CRYAA-201ENST00000291554 1139 ntAPPRIS P1 TSL 1 (best) BASIC26.75■■□□□ 1.87
ATP2A1O14983 PTPMT1-205ENST00000534775 1611 ntTSL 1 (best) BASIC26.75■■□□□ 1.87
ATP2A1O14983 SERINC5-203ENST00000509193 1441 ntTSL 1 (best) BASIC26.74■■□□□ 1.87
ATP2A1O14983 HES4-201ENST00000304952 899 ntAPPRIS P1 TSL 1 (best) BASIC26.74■■□□□ 1.87
ATP2A1O14983 SSR2-210ENST00000480567 895 ntAPPRIS P1 TSL 2 BASIC26.74■■□□□ 1.87
ATP2A1O14983 ZNRF1-205ENST00000566250 1069 ntTSL 1 (best) BASIC26.74■■□□□ 1.87
ATP2A1O14983 ZNRF1-206ENST00000567962 1234 ntAPPRIS P1 TSL 1 (best) BASIC26.74■■□□□ 1.87
ATP2A1O14983 RALB-208ENST00000631312 311 ntTSL 5 BASIC26.74■■□□□ 1.87
ATP2A1O14983 NKAIN3-202ENST00000523211 1988 ntAPPRIS P1 TSL 2 BASIC26.74■■□□□ 1.87
ATP2A1O14983 CKB-201ENST00000348956 1709 ntAPPRIS P1 TSL 1 (best) BASIC26.73■■□□□ 1.87
ATP2A1O14983 STEAP2-207ENST00000402625 1372 ntTSL 5 BASIC26.73■■□□□ 1.87
ATP2A1O14983 AC012123.1-201ENST00000426194 1661 ntTSL 5 BASIC26.73■■□□□ 1.87
ATP2A1O14983 CHTF8-208ENST00000522091 863 ntTSL 2 BASIC26.73■■□□□ 1.87
ATP2A1O14983 DUSP8P4-201ENST00000399538 1761 ntBASIC26.73■■□□□ 1.87
ATP2A1O14983 SDSL-202ENST00000403593 1449 ntAPPRIS P1 TSL 1 (best) BASIC26.73■■□□□ 1.87
ATP2A1O14983 CCDC106-202ENST00000586790 2162 ntAPPRIS P1 TSL 1 (best) BASIC26.73■■□□□ 1.87
ATP2A1O14983 PNCK-215ENST00000447676 1585 ntTSL 2 BASIC26.72■■□□□ 1.87
ATP2A1O14983 LDHB-203ENST00000396076 1538 ntAPPRIS P1 TSL 5 BASIC26.72■■□□□ 1.87
ATP2A1O14983 PGR-AS1-202ENST00000632820 1545 ntTSL 1 (best) BASIC26.72■■□□□ 1.87
ATP2A1O14983 MATK-204ENST00000585778 1994 ntAPPRIS ALT2 TSL 1 (best) BASIC26.72■■□□□ 1.87
ATP2A1O14983 LY6H-205ENST00000615409 980 ntAPPRIS P3 TSL 1 (best) BASIC26.72■■□□□ 1.87
ATP2A1O14983 PICSAR-201ENST00000615826 733 ntTSL 1 (best) BASIC26.72■■□□□ 1.87
ATP2A1O14983 AL357078.1-201ENST00000448344 310 ntTSL 4 BASIC26.71■■□□□ 1.87
ATP2A1O14983 CCND3-223ENST00000616010 2047 ntTSL 5 BASIC26.71■■□□□ 1.87
ATP2A1O14983 HOMER3-205ENST00000542541 1607 ntAPPRIS P3 TSL 1 (best) BASIC26.71■■□□□ 1.87
ATP2A1O14983 ZNF692-201ENST00000306601 1931 ntAPPRIS P3 TSL 1 (best) BASIC26.71■■□□□ 1.87
ATP2A1O14983 NAPA-201ENST00000263354 1839 ntAPPRIS P1 TSL 1 (best) BASIC26.7■■□□□ 1.87
ATP2A1O14983 TAZ-216ENST00000613002 1485 ntTSL 1 (best) BASIC26.7■■□□□ 1.87
ATP2A1O14983 C14orf80-204ENST00000392522 1630 ntAPPRIS P4 TSL 5 BASIC26.7■■□□□ 1.86
ATP2A1O14983 C1QTNF12-201ENST00000330388 1036 ntAPPRIS P1 TSL 1 (best) BASIC26.7■■□□□ 1.86
ATP2A1O14983 AC096631.2-201ENST00000436136 790 ntBASIC26.7■■□□□ 1.86
ATP2A1O14983 AC133561.4-201ENST00000566112 224 ntBASIC26.7■■□□□ 1.86
ATP2A1O14983 PPP1R14A-204ENST00000591291 433 ntTSL 5 BASIC26.7■■□□□ 1.86
ATP2A1O14983 ZNF584-205ENST00000596281 575 ntTSL 2 BASIC26.7■■□□□ 1.86
ATP2A1O14983 LINC01632-201ENST00000615763 496 ntTSL 3 BASIC26.7■■□□□ 1.86
ATP2A1O14983 TANGO2-204ENST00000401833 1920 ntTSL 5 BASIC26.7■■□□□ 1.86
ATP2A1O14983 SLC6A10P-202ENST00000431994 2058 ntBASIC26.7■■□□□ 1.86
ATP2A1O14983 KAT8-206ENST00000543774 1846 ntAPPRIS P1 TSL 5 BASIC26.69■■□□□ 1.86
ATP2A1O14983 CHSY1-201ENST00000254190 4550 ntAPPRIS P1 TSL 1 (best) BASIC26.69■■□□□ 1.86
ATP2A1O14983 ZDHHC20-203ENST00000400590 1869 ntAPPRIS ALT2 TSL 5 BASIC26.69■■□□□ 1.86
ATP2A1O14983 KDELR3-202ENST00000409006 931 ntTSL 1 (best) BASIC26.69■■□□□ 1.86
ATP2A1O14983 PFKFB4-204ENST00000416568 1575 ntTSL 1 (best) BASIC26.69■■□□□ 1.86
ATP2A1O14983 CHAC1-201ENST00000444189 1204 ntTSL 1 (best) BASIC26.69■■□□□ 1.86
ATP2A1O14983 POLR2F-211ENST00000488684 564 ntTSL 2 BASIC26.69■■□□□ 1.86
ATP2A1O14983 PABPN1-207ENST00000556821 1220 ntTSL 2 BASIC26.69■■□□□ 1.86
ATP2A1O14983 RAB40C-204ENST00000538492 2569 ntAPPRIS P1 TSL 2 BASIC26.69■■□□□ 1.86
ATP2A1O14983 RARA-AS1-201ENST00000581080 1790 ntTSL 1 (best) BASIC26.69■■□□□ 1.86
ATP2A1O14983 C9orf40-201ENST00000376854 2327 ntAPPRIS P1 TSL 1 (best) BASIC26.68■■□□□ 1.86
ATP2A1O14983 FCRLB-205ENST00000367948 1977 ntAPPRIS P1 TSL 1 (best) BASIC26.68■■□□□ 1.86
ATP2A1O14983 TMEM179-204ENST00000556573 1430 ntAPPRIS P1 TSL 3 BASIC26.68■■□□□ 1.86
ATP2A1O14983 DCTPP1-201ENST00000319285 1222 ntAPPRIS P1 TSL 1 (best) BASIC26.68■■□□□ 1.86
ATP2A1O14983 MYL5-208ENST00000511290 781 ntTSL 1 (best) BASIC26.68■■□□□ 1.86
ATP2A1O14983 FEZ1-205ENST00000524435 750 ntTSL 2 BASIC26.68■■□□□ 1.86
ATP2A1O14983 SLC9A3R2-201ENST00000424542 2194 ntAPPRIS P1 TSL 1 (best) BASIC26.68■■□□□ 1.86
ATP2A1O14983 VDAC2-203ENST00000332211 1557 ntAPPRIS P1 TSL 1 (best) BASIC26.67■■□□□ 1.86
ATP2A1O14983 STMN4-201ENST00000265770 1250 ntAPPRIS P1 TSL 1 (best) BASIC26.67■■□□□ 1.86
ATP2A1O14983 CD63-202ENST00000420846 981 ntAPPRIS P1 TSL 5 BASIC26.67■■□□□ 1.86
ATP2A1O14983 AC136475.3-202ENST00000534742 812 ntTSL 2 BASIC26.67■■□□□ 1.86
ATP2A1O14983 MIR6089-201ENST00000616698 64 ntBASIC26.67■■□□□ 1.86
ATP2A1O14983 SUMF1-202ENST00000383843 1447 ntTSL 2 BASIC26.66■■□□□ 1.86
ATP2A1O14983 HOXA11-AS1_1.1-201ENST00000613939 98 ntBASIC26.66■■□□□ 1.86
ATP2A1O14983 HAND2-201ENST00000359562 2780 ntAPPRIS P1 TSL 1 (best) BASIC26.66■■□□□ 1.86
ATP2A1O14983 DLK2-202ENST00000372485 1572 ntAPPRIS ALT1 TSL 5 BASIC26.66■■□□□ 1.86
ATP2A1O14983 NXPH3-201ENST00000328741 2179 ntAPPRIS P1 TSL 1 (best) BASIC26.65■■□□□ 1.86
ATP2A1O14983 SNHG7-204ENST00000447221 2157 ntTSL 2 BASIC26.65■■□□□ 1.86
ATP2A1O14983 C6orf89-201ENST00000355190 1309 ntAPPRIS P3 TSL 1 (best) BASIC26.65■■□□□ 1.86
ATP2A1O14983 TMCO6-201ENST00000252100 1834 ntTSL 1 (best) BASIC26.65■■□□□ 1.86
ATP2A1O14983 PRKAR1B-203ENST00000403562 1917 ntAPPRIS P1 TSL 1 (best) BASIC26.65■■□□□ 1.86
ATP2A1O14983 PEX7-201ENST00000318471 1464 ntAPPRIS P1 TSL 1 (best) BASIC26.65■■□□□ 1.86
ATP2A1O14983 RFLNA-205ENST00000546355 2354 ntAPPRIS ALT1 TSL 1 (best) BASIC26.65■■□□□ 1.86
ATP2A1O14983 HOXB3-201ENST00000311626 2642 ntAPPRIS P1 TSL 1 (best) BASIC26.65■■□□□ 1.86
ATP2A1O14983 E2F5-202ENST00000416274 1728 ntAPPRIS P4 TSL 1 (best) BASIC26.65■■□□□ 1.86
ATP2A1O14983 UBL7-202ENST00000395081 1427 ntAPPRIS P1 TSL 1 (best) BASIC26.65■■□□□ 1.86
ATP2A1O14983 SLC16A11-202ENST00000447225 1779 ntAPPRIS ALT2 TSL 5 BASIC26.63■■□□□ 1.85
ATP2A1O14983 TCFL5-201ENST00000217162 2453 ntAPPRIS ALT2 TSL 1 (best) BASIC26.63■■□□□ 1.85
ATP2A1O14983 TCFL5-202ENST00000335351 2456 ntAPPRIS P2 TSL 1 (best) BASIC26.63■■□□□ 1.85
ATP2A1O14983 AC079305.3-201ENST00000455416 218 ntTSL 5 BASIC26.63■■□□□ 1.85
ATP2A1O14983 AC005837.3-201ENST00000612163 286 ntBASIC26.63■■□□□ 1.85
ATP2A1O14983 SRRM2-231ENST00000630499 1207 ntTSL 1 (best) BASIC26.63■■□□□ 1.85
ATP2A1O14983 MTMR1-202ENST00000370390 2755 ntAPPRIS P1 TSL 1 (best) BASIC26.63■■□□□ 1.85
ATP2A1O14983 AUH-201ENST00000303617 1490 ntTSL 1 (best) BASIC26.62■■□□□ 1.85
ATP2A1O14983 PPM1B-202ENST00000345249 1713 ntTSL 1 (best) BASIC26.62■■□□□ 1.85
ATP2A1O14983 PKMYT1-211ENST00000573944 1891 ntAPPRIS P1 TSL 5 BASIC26.62■■□□□ 1.85
ATP2A1O14983 TMEM121-202ENST00000431372 1519 ntAPPRIS P1 TSL 5 BASIC26.62■■□□□ 1.85
Retrieved 100 of 98,524 protein–RNA pairs in 20.4 ms