Protein–RNA interactions for Protein: O00443

PIK3C2A, Phosphatidylinositol 4-phosphate 3-kinase C2 domain-containing subunit alpha, humanhuman

Predictions only

Length 1,686 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PIK3C2AO00443 SCARA5-204ENST00000524352 1945 ntTSL 1 (best) BASIC31.68■■■□□ 2.66
PIK3C2AO00443 KANSL2-215ENST00000553086 1830 ntTSL 5 BASIC31.67■■■□□ 2.66
PIK3C2AO00443 CCDC107-203ENST00000378407 899 ntAPPRIS ALT2 TSL 2 BASIC31.67■■■□□ 2.66
PIK3C2AO00443 NKAIN3-202ENST00000523211 1988 ntAPPRIS P1 TSL 2 BASIC31.67■■■□□ 2.66
PIK3C2AO00443 STEAP2-207ENST00000402625 1372 ntTSL 5 BASIC31.67■■■□□ 2.66
PIK3C2AO00443 AC131274.2-201ENST00000580697 1507 ntBASIC31.67■■■□□ 2.66
PIK3C2AO00443 AC004448.1-201ENST00000458332 883 ntBASIC31.67■■■□□ 2.66
PIK3C2AO00443 RPRD1A-207ENST00000588737 1264 ntTSL 2 BASIC31.67■■■□□ 2.66
PIK3C2AO00443 GADD45A-202ENST00000370986 1496 ntAPPRIS P1 TSL 1 (best) BASIC31.66■■■□□ 2.66
PIK3C2AO00443 THRA-204ENST00000546243 1909 ntAPPRIS P1 TSL 2 BASIC31.66■■■□□ 2.66
PIK3C2AO00443 SHISA5-201ENST00000296444 2369 ntTSL 1 (best) BASIC31.66■■■□□ 2.66
PIK3C2AO00443 RINL-202ENST00000591812 1910 ntAPPRIS ALT2 TSL 2 BASIC31.65■■■□□ 2.66
PIK3C2AO00443 DNPH1-201ENST00000230431 657 ntAPPRIS P1 TSL 1 (best) BASIC31.65■■■□□ 2.66
PIK3C2AO00443 CLPSL2-201ENST00000360454 488 ntAPPRIS ALT2 TSL 1 (best) BASIC31.65■■■□□ 2.66
PIK3C2AO00443 SERGEF-219ENST00000532265 1124 ntTSL 2 BASIC31.65■■■□□ 2.66
PIK3C2AO00443 FBXO33-202ENST00000554190 534 ntTSL 3 BASIC31.65■■■□□ 2.66
PIK3C2AO00443 AC135279.3-201ENST00000610945 1311 ntBASIC31.65■■■□□ 2.66
PIK3C2AO00443 CREB3L3-205ENST00000602257 1475 ntAPPRIS ALT2 TSL 1 (best) BASIC31.65■■■□□ 2.66
PIK3C2AO00443 UNC93B3-201ENST00000308076 687 ntBASIC31.64■■■□□ 2.66
PIK3C2AO00443 PBX2P1-201ENST00000493219 1291 ntBASIC31.64■■■□□ 2.66
PIK3C2AO00443 AL136162.1-201ENST00000607711 1078 ntBASIC31.64■■■□□ 2.66
PIK3C2AO00443 GRAMD1B-217ENST00000640939 1212 ntTSL 5 BASIC31.64■■■□□ 2.66
PIK3C2AO00443 AUH-201ENST00000303617 1490 ntTSL 1 (best) BASIC31.64■■■□□ 2.66
PIK3C2AO00443 CKB-201ENST00000348956 1709 ntAPPRIS P1 TSL 1 (best) BASIC31.64■■■□□ 2.66
PIK3C2AO00443 SRP68-202ENST00000539137 2386 ntTSL 2 BASIC31.64■■■□□ 2.66
PIK3C2AO00443 HTRA1-201ENST00000368984 2120 ntAPPRIS P1 TSL 1 (best) BASIC31.64■■■□□ 2.66
PIK3C2AO00443 CARD19-201ENST00000375464 855 ntAPPRIS P1 TSL 1 (best) BASIC31.64■■■□□ 2.65
PIK3C2AO00443 FOXB2-201ENST00000376708 1299 ntAPPRIS P1 BASIC31.64■■■□□ 2.65
PIK3C2AO00443 PARD6B-202ENST00000396039 522 ntTSL 1 (best) BASIC31.64■■■□□ 2.65
PIK3C2AO00443 AL359317.1-201ENST00000556316 578 ntTSL 4 BASIC31.64■■■□□ 2.65
PIK3C2AO00443 SNX24-201ENST00000261369 2158 ntAPPRIS P1 TSL 1 (best) BASIC31.63■■■□□ 2.65
PIK3C2AO00443 HADH-203ENST00000505878 1719 ntTSL 1 (best) BASIC31.63■■■□□ 2.65
PIK3C2AO00443 FRAT2-201ENST00000371019 2213 ntAPPRIS P1 BASIC31.63■■■□□ 2.65
PIK3C2AO00443 C1QTNF12-201ENST00000330388 1036 ntAPPRIS P1 TSL 1 (best) BASIC31.63■■■□□ 2.65
PIK3C2AO00443 AC024257.2-201ENST00000549699 147 ntBASIC31.63■■■□□ 2.65
PIK3C2AO00443 BICDL2-203ENST00000572449 1984 ntAPPRIS P1 TSL 5 BASIC31.63■■■□□ 2.65
PIK3C2AO00443 WFDC1-201ENST00000219454 1534 ntAPPRIS P1 TSL 1 (best) BASIC31.62■■■□□ 2.65
PIK3C2AO00443 KAZALD1-201ENST00000370200 1913 ntAPPRIS P1 TSL 1 (best) BASIC31.62■■■□□ 2.65
PIK3C2AO00443 TMEM170A-206ENST00000569276 609 ntTSL 2 BASIC31.62■■■□□ 2.65
PIK3C2AO00443 CCND3-223ENST00000616010 2047 ntTSL 5 BASIC31.62■■■□□ 2.65
PIK3C2AO00443 C19orf60-201ENST00000358607 839 ntAPPRIS P3 TSL 1 (best) BASIC31.61■■■□□ 2.65
PIK3C2AO00443 AC026271.2-201ENST00000428091 497 ntBASIC31.61■■■□□ 2.65
PIK3C2AO00443 C19orf60-202ENST00000450195 702 ntAPPRIS ALT2 TSL 1 (best) BASIC31.61■■■□□ 2.65
PIK3C2AO00443 RASGEF1B-208ENST00000510780 539 ntTSL 3 BASIC31.61■■■□□ 2.65
PIK3C2AO00443 RASGEF1B-209ENST00000512343 498 ntTSL 3 BASIC31.61■■■□□ 2.65
PIK3C2AO00443 GMPPB-202ENST00000308388 1582 ntAPPRIS P1 TSL 1 (best) BASIC31.61■■■□□ 2.65
PIK3C2AO00443 GATA4-209ENST00000622443 1982 ntTSL 5 BASIC31.61■■■□□ 2.65
PIK3C2AO00443 VIPR2-203ENST00000402066 1926 ntAPPRIS ALT2 TSL 5 BASIC31.61■■■□□ 2.65
PIK3C2AO00443 AC092803.2-201ENST00000564287 1899 ntBASIC31.61■■■□□ 2.65
PIK3C2AO00443 CDKN2D-201ENST00000335766 1086 ntAPPRIS P1 TSL 1 (best) BASIC31.6■■■□□ 2.65
PIK3C2AO00443 AL355987.3-201ENST00000456614 735 ntAPPRIS P1 TSL 4 BASIC31.6■■■□□ 2.65
PIK3C2AO00443 CDKN2A-206ENST00000494262 989 ntTSL 3 BASIC31.6■■■□□ 2.65
PIK3C2AO00443 KAT8-206ENST00000543774 1846 ntAPPRIS P1 TSL 5 BASIC31.6■■■□□ 2.65
PIK3C2AO00443 LYPD2-201ENST00000359228 594 ntAPPRIS P1 TSL 1 (best) BASIC31.6■■■□□ 2.65
PIK3C2AO00443 CHAC1-201ENST00000444189 1204 ntTSL 1 (best) BASIC31.6■■■□□ 2.65
PIK3C2AO00443 AC142381.2-201ENST00000566120 298 ntBASIC31.6■■■□□ 2.65
PIK3C2AO00443 MATK-204ENST00000585778 1994 ntAPPRIS ALT2 TSL 1 (best) BASIC31.59■■■□□ 2.65
PIK3C2AO00443 CCDC107-205ENST00000421582 1324 ntAPPRIS ALT2 TSL 2 BASIC31.59■■■□□ 2.65
PIK3C2AO00443 GATM-206ENST00000558336 1522 ntTSL 2 BASIC31.59■■■□□ 2.65
PIK3C2AO00443 RBMXL2-201ENST00000306904 1874 ntAPPRIS P1 BASIC31.59■■■□□ 2.65
PIK3C2AO00443 AC009097.2-201ENST00000562763 465 ntTSL 2 BASIC31.59■■■□□ 2.65
PIK3C2AO00443 VRK2-202ENST00000412104 1916 ntTSL 1 (best) BASIC31.59■■■□□ 2.65
PIK3C2AO00443 RCE1-202ENST00000524506 1379 ntTSL 5 BASIC31.59■■■□□ 2.65
PIK3C2AO00443 ZNF641-205ENST00000547026 1823 ntAPPRIS P1 TSL 1 (best) BASIC31.58■■■□□ 2.65
PIK3C2AO00443 AP006621.3-202ENST00000530083 765 ntTSL 3 BASIC31.58■■■□□ 2.65
PIK3C2AO00443 CCDC189-211ENST00000545825 1046 ntTSL 1 (best) BASIC31.58■■■□□ 2.65
PIK3C2AO00443 BAG1-212ENST00000641048 1038 ntAPPRIS P3 BASIC31.58■■■□□ 2.65
PIK3C2AO00443 AC105935.1-201ENST00000424174 422 ntTSL 3 BASIC31.57■■■□□ 2.65
PIK3C2AO00443 BCAP31-207ENST00000458587 1810 ntTSL 1 (best) BASIC31.57■■■□□ 2.64
PIK3C2AO00443 SYT8-201ENST00000341958 1556 ntAPPRIS ALT2 TSL 5 BASIC31.57■■■□□ 2.64
PIK3C2AO00443 SMIM29-205ENST00000468145 903 ntTSL 2 BASIC31.57■■■□□ 2.64
PIK3C2AO00443 SMIM29-207ENST00000481533 1053 ntAPPRIS P1 TSL 1 (best) BASIC31.57■■■□□ 2.64
PIK3C2AO00443 AC112229.4-201ENST00000488671 1528 ntTSL 2 BASIC31.57■■■□□ 2.64
PIK3C2AO00443 ZDHHC16-206ENST00000370854 1798 ntAPPRIS P4 TSL 1 (best) BASIC31.57■■■□□ 2.64
PIK3C2AO00443 PRSS22-201ENST00000161006 1386 ntAPPRIS P1 TSL 1 (best) BASIC31.56■■■□□ 2.64
PIK3C2AO00443 RABEP2-203ENST00000544477 1645 ntTSL 2 BASIC31.56■■■□□ 2.64
PIK3C2AO00443 FADD-201ENST00000301838 1841 ntAPPRIS P1 TSL 1 (best) BASIC31.56■■■□□ 2.64
PIK3C2AO00443 LGR4-203ENST00000480977 492 ntTSL 2 BASIC31.56■■■□□ 2.64
PIK3C2AO00443 COL13A1-203ENST00000398969 2267 ntAPPRIS ALT2 TSL 5 BASIC31.55■■■□□ 2.64
PIK3C2AO00443 SRD5A1P1-201ENST00000442297 786 ntBASIC31.55■■■□□ 2.64
PIK3C2AO00443 VAMP2-204ENST00000488857 874 ntAPPRIS ALT1 TSL 3 BASIC31.55■■■□□ 2.64
PIK3C2AO00443 AP001330.3-201ENST00000520123 633 ntBASIC31.55■■■□□ 2.64
PIK3C2AO00443 BAMBI-201ENST00000375533 1877 ntAPPRIS P1 TSL 1 (best) BASIC31.55■■■□□ 2.64
PIK3C2AO00443 GNAL-201ENST00000269162 1722 ntAPPRIS P1 TSL 2 BASIC31.55■■■□□ 2.64
PIK3C2AO00443 MIR6089-201ENST00000616698 64 ntBASIC31.54■■■□□ 2.64
PIK3C2AO00443 CAMKK1-201ENST00000158166 2459 ntTSL 1 (best) BASIC31.54■■■□□ 2.64
PIK3C2AO00443 MROH6-210ENST00000533679 1921 ntAPPRIS ALT2 TSL 1 (best) BASIC31.54■■■□□ 2.64
PIK3C2AO00443 FBXL20-203ENST00000577399 1620 ntTSL 5 BASIC31.54■■■□□ 2.64
PIK3C2AO00443 TMEM125-202ENST00000439858 1786 ntAPPRIS P1 TSL 2 BASIC31.54■■■□□ 2.64
PIK3C2AO00443 MARCH2-201ENST00000215555 1376 ntAPPRIS P1 TSL 5 BASIC31.53■■■□□ 2.64
PIK3C2AO00443 EDA-201ENST00000338901 1233 ntBASIC31.53■■■□□ 2.64
PIK3C2AO00443 TMEM147-203ENST00000392205 767 ntTSL 2 BASIC31.53■■■□□ 2.64
PIK3C2AO00443 MEIS1-AS3-201ENST00000454167 707 ntTSL 4 BASIC31.53■■■□□ 2.64
PIK3C2AO00443 ACBD4-216ENST00000619916 1276 ntTSL 5 BASIC31.53■■■□□ 2.64
PIK3C2AO00443 C14orf80-204ENST00000392522 1630 ntAPPRIS P4 TSL 5 BASIC31.53■■■□□ 2.64
PIK3C2AO00443 AP2S1-201ENST00000263270 935 ntAPPRIS P3 TSL 1 (best) BASIC31.52■■■□□ 2.64
PIK3C2AO00443 NAA38-201ENST00000333775 999 ntTSL 1 (best) BASIC31.52■■■□□ 2.64
PIK3C2AO00443 ELOC-206ENST00000520242 1573 ntAPPRIS P1 TSL 1 (best) BASIC31.52■■■□□ 2.64
PIK3C2AO00443 PRKAR1B-203ENST00000403562 1917 ntAPPRIS P1 TSL 1 (best) BASIC31.52■■■□□ 2.64
PIK3C2AO00443 CD63-202ENST00000420846 981 ntAPPRIS P1 TSL 5 BASIC31.51■■■□□ 2.64
Retrieved 100 of 98,524 protein–RNA pairs in 15.4 ms