Protein–RNA interactions for Protein: O00400

SLC33A1, Acetyl-coenzyme A transporter 1, humanhuman

Predicted RBP Predictions only

Length 549 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC33A1O00400 RNPEP-202ENST00000367286 2282 ntTSL 5 BASIC19.69■□□□□ 0.74
SLC33A1O00400 NPEPL1-201ENST00000356091 2378 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
SLC33A1O00400 PTPN2-202ENST00000327283 1706 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
SLC33A1O00400 THRA-201ENST00000264637 2538 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
SLC33A1O00400 ADAM22-209ENST00000439864 2576 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
SLC33A1O00400 LURAP1L-201ENST00000319264 1753 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
SLC33A1O00400 RPS2P7-201ENST00000447334 885 ntBASIC19.68■□□□□ 0.74
SLC33A1O00400 ANO8-204ENST00000630631 1905 ntTSL 5 BASIC19.68■□□□□ 0.74
SLC33A1O00400 CCZ1B-201ENST00000316731 2885 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
SLC33A1O00400 CCND3-223ENST00000616010 2047 ntTSL 5 BASIC19.68■□□□□ 0.74
SLC33A1O00400 RBM42-205ENST00000589871 1487 ntTSL 5 BASIC19.67■□□□□ 0.74
SLC33A1O00400 CPOX-201ENST00000264193 2825 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
SLC33A1O00400 LDHB-203ENST00000396076 1538 ntAPPRIS P1 TSL 5 BASIC19.67■□□□□ 0.74
SLC33A1O00400 GP1BB-201ENST00000366425 1553 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
SLC33A1O00400 INPP5J-206ENST00000404453 1613 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
SLC33A1O00400 C20orf24-201ENST00000342422 896 ntTSL 2 BASIC19.67■□□□□ 0.74
SLC33A1O00400 C20orf24-202ENST00000344795 1114 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
SLC33A1O00400 LIME1-206ENST00000487026 805 ntAPPRIS ALT2 TSL 5 BASIC19.67■□□□□ 0.74
SLC33A1O00400 U85056.1-201ENST00000616429 682 ntBASIC19.67■□□□□ 0.74
SLC33A1O00400 RHOBTB3-206ENST00000506817 1432 ntTSL 2 BASIC19.67■□□□□ 0.74
SLC33A1O00400 PCOLCE2-201ENST00000295992 2021 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
SLC33A1O00400 ABHD8-201ENST00000247706 2090 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
SLC33A1O00400 UXS1-201ENST00000283148 2099 ntAPPRIS ALT1 TSL 2 BASIC19.66■□□□□ 0.74
SLC33A1O00400 SRXN1-201ENST00000381962 2698 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
SLC33A1O00400 GNAS-AS1_1.1-201ENST00000621898 103 ntBASIC19.66■□□□□ 0.74
SLC33A1O00400 RPS6KA2-201ENST00000265678 5824 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
SLC33A1O00400 CAPN10-207ENST00000391984 2644 ntAPPRIS P2 TSL 1 (best) BASIC19.66■□□□□ 0.74
SLC33A1O00400 AC006455.5-202ENST00000615248 2284 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
SLC33A1O00400 ID4-201ENST00000378700 2344 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
SLC33A1O00400 NAB1-202ENST00000409581 2360 ntAPPRIS P3 TSL 2 BASIC19.65■□□□□ 0.74
SLC33A1O00400 AGAP3-201ENST00000335367 2675 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
SLC33A1O00400 LINC01578-209ENST00000557682 2683 ntTSL 2 BASIC19.65■□□□□ 0.74
SLC33A1O00400 MEIS3-201ENST00000331559 2104 ntAPPRIS ALT2 TSL 5 BASIC19.65■□□□□ 0.74
SLC33A1O00400 DUX4L9-201ENST00000449051 1259 ntBASIC19.65■□□□□ 0.74
SLC33A1O00400 FAM222B-205ENST00000577682 549 ntTSL 4 BASIC19.65■□□□□ 0.74
SLC33A1O00400 ROR1-202ENST00000371080 2305 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
SLC33A1O00400 LINC00543-201ENST00000567234 1845 ntBASIC19.65■□□□□ 0.74
SLC33A1O00400 TMEM51-205ENST00000434578 1861 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
SLC33A1O00400 JMJD8-201ENST00000412368 2038 ntAPPRIS P2 TSL 1 (best) BASIC19.64■□□□□ 0.74
SLC33A1O00400 CPLX1-201ENST00000304062 2181 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.74
SLC33A1O00400 TMEM191C-206ENST00000432134 1129 ntAPPRIS ALT2 TSL 5 BASIC19.64■□□□□ 0.73
SLC33A1O00400 MIR6765-201ENST00000614092 87 ntBASIC19.64■□□□□ 0.73
SLC33A1O00400 BRD4-212ENST00000630599 726 ntTSL 2 BASIC19.64■□□□□ 0.73
SLC33A1O00400 TSPAN4-203ENST00000397397 1423 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
SLC33A1O00400 SHISA8-202ENST00000621082 1405 ntAPPRIS P2 TSL 5 BASIC19.64■□□□□ 0.73
SLC33A1O00400 RAB20-201ENST00000267328 1518 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
SLC33A1O00400 RFC2-201ENST00000055077 1695 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
SLC33A1O00400 TMED2-201ENST00000262225 2560 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
SLC33A1O00400 PARD3-210ENST00000374794 5669 ntAPPRIS ALT2 TSL 1 (best) BASIC19.64■□□□□ 0.73
SLC33A1O00400 MAP3K21-203ENST00000366624 5809 ntAPPRIS P2 TSL 1 (best) BASIC19.64■□□□□ 0.73
SLC33A1O00400 WRNIP1-205ENST00000618555 2651 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
SLC33A1O00400 KLF15-201ENST00000296233 2574 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
SLC33A1O00400 RAX2-202ENST00000555978 2145 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
SLC33A1O00400 GPR160-201ENST00000355897 2039 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
SLC33A1O00400 RCC2-201ENST00000375433 2030 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
SLC33A1O00400 PARD3-208ENST00000374789 6005 ntAPPRIS P3 TSL 1 (best) BASIC19.63■□□□□ 0.73
SLC33A1O00400 NOCT-201ENST00000280614 1952 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
SLC33A1O00400 AP000802.1-201ENST00000500537 1934 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
SLC33A1O00400 RARA-AS1-201ENST00000581080 1790 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
SLC33A1O00400 RRAD-201ENST00000299759 1569 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
SLC33A1O00400 DUSP22-201ENST00000344450 1485 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
SLC33A1O00400 IDNK-203ENST00000405990 629 ntTSL 2 BASIC19.63■□□□□ 0.73
SLC33A1O00400 LINC01233-202ENST00000598832 568 ntTSL 2 BASIC19.63■□□□□ 0.73
SLC33A1O00400 CNNM1-201ENST00000356713 5959 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
SLC33A1O00400 ALDH16A1-203ENST00000540132 2174 ntTSL 2 BASIC19.63■□□□□ 0.73
SLC33A1O00400 GOLGA7-201ENST00000357743 2027 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
SLC33A1O00400 TXNRD2-201ENST00000334363 1893 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
SLC33A1O00400 RYK-209ENST00000623711 2934 ntAPPRIS ALT2 TSL 1 (best) BASIC19.62■□□□□ 0.73
SLC33A1O00400 BMP6-201ENST00000283147 2780 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
SLC33A1O00400 ATG16L2-205ENST00000534905 1614 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
SLC33A1O00400 CBARP-202ENST00000382477 2453 ntAPPRIS ALT2 TSL 5 BASIC19.62■□□□□ 0.73
SLC33A1O00400 BIN1-205ENST00000351659 2365 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
SLC33A1O00400 CACNA1A-218ENST00000635895 8657 ntAPPRIS ALT2 TSL 5 BASIC19.62■□□□□ 0.73
SLC33A1O00400 CACNA1A-257ENST00000638009 8665 ntAPPRIS ALT2 TSL 1 (best) BASIC19.62■□□□□ 0.73
SLC33A1O00400 FAM136A-202ENST00000430566 885 ntTSL 3 BASIC19.62■□□□□ 0.73
SLC33A1O00400 UBE2I-213ENST00000566587 1098 ntAPPRIS P1 TSL 2 BASIC19.62■□□□□ 0.73
SLC33A1O00400 AC087393.1-201ENST00000582896 145 ntBASIC19.62■□□□□ 0.73
SLC33A1O00400 SNX10-207ENST00000446848 2613 ntAPPRIS P2 TSL 1 (best) BASIC19.62■□□□□ 0.73
SLC33A1O00400 ZFYVE28-202ENST00000503000 1874 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
SLC33A1O00400 INPPL1-201ENST00000298229 4733 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
SLC33A1O00400 BSPRY-201ENST00000374183 2339 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
SLC33A1O00400 AC141586.4-201ENST00000624558 1573 ntBASIC19.61■□□□□ 0.73
SLC33A1O00400 LAMC3-202ENST00000361069 6133 ntAPPRIS P1 TSL 2 BASIC19.61■□□□□ 0.73
SLC33A1O00400 NKAIN3-202ENST00000523211 1988 ntAPPRIS P1 TSL 2 BASIC19.61■□□□□ 0.73
SLC33A1O00400 DOK3-205ENST00000501403 1872 ntAPPRIS P1 TSL 5 BASIC19.61■□□□□ 0.73
SLC33A1O00400 TMEM202-AS1-202ENST00000565181 2325 ntBASIC19.61■□□□□ 0.73
SLC33A1O00400 PSMG4-207ENST00000451246 824 ntTSL 3 BASIC19.61■□□□□ 0.73
SLC33A1O00400 CTF1-201ENST00000279804 1664 ntAPPRIS P3 TSL 1 (best) BASIC19.61■□□□□ 0.73
SLC33A1O00400 BDH1-207ENST00000441275 1605 ntTSL 5 BASIC19.61■□□□□ 0.73
SLC33A1O00400 ESR2-202ENST00000341099 2060 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
SLC33A1O00400 ID2-201ENST00000234091 2041 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
SLC33A1O00400 LGR4-202ENST00000389858 5163 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
SLC33A1O00400 BIN1-203ENST00000346226 2401 ntAPPRIS ALT2 TSL 1 (best) BASIC19.61■□□□□ 0.73
SLC33A1O00400 TARSL2-207ENST00000615656 2356 ntAPPRIS ALT2 TSL 5 BASIC19.61■□□□□ 0.73
SLC33A1O00400 GRIN1-208ENST00000371561 5149 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
SLC33A1O00400 KRT18P60-201ENST00000312876 1297 ntBASIC19.6■□□□□ 0.73
SLC33A1O00400 FGF22-202ENST00000586042 1288 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
SLC33A1O00400 AC129492.7-201ENST00000622992 756 ntBASIC19.6■□□□□ 0.73
SLC33A1O00400 HNRNPD-203ENST00000353341 1585 ntAPPRIS ALT1 TSL 1 (best) BASIC19.6■□□□□ 0.73
SLC33A1O00400 UBE2E3-202ENST00000410062 1570 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Retrieved 100 of 98,524 protein–RNA pairs in 86.6 ms