Protein–RNA interactions for Protein: O00322

UPK1A, Uroplakin-1a, humanhuman

Predictions only

Length 258 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UPK1AO00322 AC087393.1-201ENST00000582896 145 ntBASIC22.05■■□□□ 1.12
UPK1AO00322 POLE2-201ENST00000216367 1776 ntAPPRIS P1 TSL 1 (best) BASIC22.04■■□□□ 1.12
UPK1AO00322 FOXO3B-201ENST00000395675 1928 ntBASIC22.04■■□□□ 1.12
UPK1AO00322 AC079834.2-201ENST00000609776 1949 ntBASIC22.04■■□□□ 1.12
UPK1AO00322 ZFAND4-205ENST00000374371 2283 ntTSL 5 BASIC22.04■■□□□ 1.12
UPK1AO00322 YWHAH-201ENST00000248975 1825 ntAPPRIS P1 TSL 1 (best) BASIC22.04■■□□□ 1.12
UPK1AO00322 DUSP8P5-201ENST00000422884 1815 ntBASIC22.04■■□□□ 1.12
UPK1AO00322 LMAN2-208ENST00000515209 1149 ntAPPRIS ALT2 TSL 3 BASIC22.04■■□□□ 1.12
UPK1AO00322 ZFP91-CNTF-201ENST00000389919 2319 ntAPPRIS P5 TSL 2 BASIC22.04■■□□□ 1.12
UPK1AO00322 SLC35A2-209ENST00000452555 1563 ntTSL 2 BASIC22.04■■□□□ 1.12
UPK1AO00322 PPP1R14A-201ENST00000301242 777 ntAPPRIS P1 TSL 1 (best) BASIC22.03■■□□□ 1.12
UPK1AO00322 AC018755.3-201ENST00000598755 664 ntTSL 2 BASIC22.03■■□□□ 1.12
UPK1AO00322 AC004812.2-201ENST00000611079 2094 ntBASIC22.03■■□□□ 1.12
UPK1AO00322 LTBP3-212ENST00000529189 1997 ntTSL 2 BASIC22.03■■□□□ 1.12
UPK1AO00322 ABHD17B-202ENST00000377041 1312 ntAPPRIS P4 TSL 1 (best) BASIC22.03■■□□□ 1.12
UPK1AO00322 GOLGA7-201ENST00000357743 2027 ntAPPRIS P1 TSL 1 (best) BASIC22.02■■□□□ 1.12
UPK1AO00322 JMJD8-201ENST00000412368 2038 ntAPPRIS P2 TSL 1 (best) BASIC22.02■■□□□ 1.12
UPK1AO00322 C7orf25-206ENST00000447342 1823 ntTSL 2 BASIC22.02■■□□□ 1.12
UPK1AO00322 STRBP-202ENST00000360998 2990 ntTSL 1 (best) BASIC22.02■■□□□ 1.12
UPK1AO00322 ARSB-206ENST00000565165 1772 ntTSL 1 (best) BASIC22.02■■□□□ 1.11
UPK1AO00322 WNT11-201ENST00000322563 1930 ntAPPRIS P1 TSL 1 (best) BASIC22.02■■□□□ 1.11
UPK1AO00322 ARHGEF9-210ENST00000623517 2143 ntTSL 2 BASIC22.01■■□□□ 1.11
UPK1AO00322 TCF3-203ENST00000395423 2779 ntTSL 5 BASIC22.01■■□□□ 1.11
UPK1AO00322 DAZAP1-201ENST00000233078 2160 ntAPPRIS P2 TSL 1 (best) BASIC22.01■■□□□ 1.11
UPK1AO00322 CYP4V2-201ENST00000378802 2042 ntAPPRIS P1 TSL 1 (best) BASIC22.01■■□□□ 1.11
UPK1AO00322 UBE2E3-202ENST00000410062 1570 ntAPPRIS P1 TSL 1 (best) BASIC22.01■■□□□ 1.11
UPK1AO00322 AC104002.3-202ENST00000557170 1100 ntTSL 3 BASIC22.01■■□□□ 1.11
UPK1AO00322 C16orf95-206ENST00000618367 974 ntAPPRIS ALT2 TSL 2 BASIC22.01■■□□□ 1.11
UPK1AO00322 DUSP22-201ENST00000344450 1485 ntTSL 1 (best) BASIC22.01■■□□□ 1.11
UPK1AO00322 CNTFR-201ENST00000351266 1910 ntAPPRIS P1 TSL 1 (best) BASIC22■■□□□ 1.11
UPK1AO00322 LTB4R2-205ENST00000543919 1560 ntAPPRIS P1 TSL 1 (best) BASIC22■■□□□ 1.11
UPK1AO00322 PSPH-201ENST00000275605 2131 ntAPPRIS P1 TSL 1 (best) BASIC22■■□□□ 1.11
UPK1AO00322 FAM136A-202ENST00000430566 885 ntTSL 3 BASIC22■■□□□ 1.11
UPK1AO00322 C17orf49-201ENST00000439424 850 ntAPPRIS P3 TSL 1 (best) BASIC22■■□□□ 1.11
UPK1AO00322 FGF22-202ENST00000586042 1288 ntTSL 1 (best) BASIC22■■□□□ 1.11
UPK1AO00322 HOXD9-201ENST00000249499 1870 ntAPPRIS P1 TSL 1 (best) BASIC22■■□□□ 1.11
UPK1AO00322 TSPAN4-202ENST00000397396 1332 ntTSL 5 BASIC22■■□□□ 1.11
UPK1AO00322 KLC1-201ENST00000246489 2294 ntAPPRIS P1 TSL 5 BASIC22■■□□□ 1.11
UPK1AO00322 KLC1-224ENST00000557450 2265 ntTSL 5 BASIC22■■□□□ 1.11
UPK1AO00322 RBFOX2-209ENST00000438146 1356 ntAPPRIS P3 TSL 1 (best) BASIC21.99■■□□□ 1.11
UPK1AO00322 BFSP1-202ENST00000377873 2207 ntAPPRIS P1 TSL 1 (best) BASIC21.99■■□□□ 1.11
UPK1AO00322 RBMXL2-201ENST00000306904 1874 ntAPPRIS P1 BASIC21.99■■□□□ 1.11
UPK1AO00322 PEBP1-201ENST00000261313 1697 ntAPPRIS P1 TSL 1 (best) BASIC21.99■■□□□ 1.11
UPK1AO00322 HERC2P9-201ENST00000507787 1023 ntTSL 1 (best) BASIC21.99■■□□□ 1.11
UPK1AO00322 ELOC-207ENST00000522337 816 ntAPPRIS P1 TSL 2 BASIC21.99■■□□□ 1.11
UPK1AO00322 HOMER3-207ENST00000594794 903 ntTSL 5 BASIC21.99■■□□□ 1.11
UPK1AO00322 PDE10A-205ENST00000616273 2118 ntTSL 2 BASIC21.99■■□□□ 1.11
UPK1AO00322 GADD45A-205ENST00000617962 1142 ntTSL 1 (best) BASIC21.99■■□□□ 1.11
UPK1AO00322 TCEA1-213ENST00000640041 1171 ntTSL 5 BASIC21.99■■□□□ 1.11
UPK1AO00322 MTERF3-204ENST00000523821 1529 ntTSL 1 (best) BASIC21.99■■□□□ 1.11
UPK1AO00322 MPST-203ENST00000401419 1345 ntAPPRIS P1 TSL 1 (best) BASIC21.99■■□□□ 1.11
UPK1AO00322 LURAP1L-201ENST00000319264 1753 ntAPPRIS P1 TSL 1 (best) BASIC21.99■■□□□ 1.11
UPK1AO00322 ST3GAL5-214ENST00000638178 2034 ntTSL 5 BASIC21.99■■□□□ 1.11
UPK1AO00322 RAB20-201ENST00000267328 1518 ntAPPRIS P1 TSL 1 (best) BASIC21.98■■□□□ 1.11
UPK1AO00322 OXLD1-201ENST00000374741 620 ntAPPRIS P1 TSL 1 (best) BASIC21.98■■□□□ 1.11
UPK1AO00322 AL121899.1-202ENST00000411839 536 ntTSL 5 BASIC21.98■■□□□ 1.11
UPK1AO00322 ESR2-202ENST00000341099 2060 ntAPPRIS P1 TSL 1 (best) BASIC21.98■■□□□ 1.11
UPK1AO00322 PITX2-209ENST00000557119 1889 ntTSL 2 BASIC21.98■■□□□ 1.11
UPK1AO00322 ME2-208ENST00000638937 2471 ntTSL 5 BASIC21.98■■□□□ 1.11
UPK1AO00322 GPR160-201ENST00000355897 2039 ntAPPRIS P1 TSL 1 (best) BASIC21.97■■□□□ 1.11
UPK1AO00322 LRRC73-201ENST00000372441 2121 ntAPPRIS P1 TSL 1 (best) BASIC21.97■■□□□ 1.11
UPK1AO00322 DOK3-205ENST00000501403 1872 ntAPPRIS P1 TSL 5 BASIC21.97■■□□□ 1.11
UPK1AO00322 DUX4L18-201ENST00000553347 1267 ntBASIC21.97■■□□□ 1.11
UPK1AO00322 MIR6089-201ENST00000616698 64 ntBASIC21.97■■□□□ 1.11
UPK1AO00322 TSPAN4-203ENST00000397397 1423 ntAPPRIS P1 TSL 1 (best) BASIC21.97■■□□□ 1.11
UPK1AO00322 GNPTG-201ENST00000204679 1983 ntAPPRIS P1 TSL 1 (best) BASIC21.96■■□□□ 1.11
UPK1AO00322 INPP5J-206ENST00000404453 1613 ntTSL 1 (best) BASIC21.96■■□□□ 1.11
UPK1AO00322 SYNDIG1-201ENST00000376862 2522 ntAPPRIS P1 TSL 1 (best) BASIC21.96■■□□□ 1.11
UPK1AO00322 LY6H-201ENST00000342752 951 ntAPPRIS ALT2 TSL 1 (best) BASIC21.96■■□□□ 1.11
UPK1AO00322 LY6H-202ENST00000414417 1056 ntAPPRIS ALT2 TSL 1 (best) BASIC21.96■■□□□ 1.11
UPK1AO00322 LY6H-203ENST00000430474 925 ntAPPRIS P3 TSL 3 BASIC21.96■■□□□ 1.11
UPK1AO00322 SNX5-219ENST00000606602 885 ntTSL 1 (best) BASIC21.96■■□□□ 1.11
UPK1AO00322 LDB1-201ENST00000361198 2285 ntAPPRIS P1 TSL 1 (best) BASIC21.96■■□□□ 1.11
UPK1AO00322 CAPNS1-216ENST00000628306 1389 ntTSL 5 BASIC21.96■■□□□ 1.11
UPK1AO00322 RNF223-201ENST00000453464 1902 ntAPPRIS P1 TSL 2 BASIC21.96■■□□□ 1.11
UPK1AO00322 HIRA-202ENST00000340170 3395 ntTSL 1 (best) BASIC21.96■■□□□ 1.11
UPK1AO00322 RIOX1-201ENST00000304061 2429 ntAPPRIS P1 BASIC21.96■■□□□ 1.11
UPK1AO00322 SLC9A3-203ENST00000514375 2504 ntAPPRIS ALT2 TSL 1 (best) BASIC21.96■■□□□ 1.11
UPK1AO00322 FAM86JP-203ENST00000485843 2012 ntTSL 1 (best) BASIC21.96■■□□□ 1.11
UPK1AO00322 RRAD-201ENST00000299759 1569 ntAPPRIS P1 TSL 1 (best) BASIC21.95■■□□□ 1.11
UPK1AO00322 PTH1R-207ENST00000449590 2123 ntAPPRIS P1 TSL 1 (best) BASIC21.95■■□□□ 1.11
UPK1AO00322 LSR-205ENST00000427250 1606 ntTSL 2 BASIC21.95■■□□□ 1.1
UPK1AO00322 SLC39A4-202ENST00000301305 2174 ntAPPRIS P1 TSL 1 (best) BASIC21.95■■□□□ 1.1
UPK1AO00322 RPL13-202ENST00000393099 2385 ntAPPRIS P1 TSL 1 (best) BASIC21.95■■□□□ 1.1
UPK1AO00322 AC004987.1-201ENST00000428627 508 ntBASIC21.95■■□□□ 1.1
UPK1AO00322 SMKR1-201ENST00000462322 1035 ntAPPRIS P1 TSL 1 (best) BASIC21.95■■□□□ 1.1
UPK1AO00322 OXLD1-203ENST00000571503 803 ntTSL 2 BASIC21.95■■□□□ 1.1
UPK1AO00322 NAPRT-204ENST00000449291 1965 ntAPPRIS P1 TSL 1 (best) BASIC21.95■■□□□ 1.1
UPK1AO00322 BCKDHB-202ENST00000356489 1514 ntAPPRIS P1 TSL 1 (best) BASIC21.95■■□□□ 1.1
UPK1AO00322 LDHB-203ENST00000396076 1538 ntAPPRIS P1 TSL 5 BASIC21.95■■□□□ 1.1
UPK1AO00322 FKBP1A-211ENST00000618612 1518 ntTSL 1 (best) BASIC21.95■■□□□ 1.1
UPK1AO00322 PCMT1-202ENST00000367380 1628 ntTSL 2 BASIC21.95■■□□□ 1.1
UPK1AO00322 PCMT1-211ENST00000544496 1628 ntTSL 2 BASIC21.95■■□□□ 1.1
UPK1AO00322 GNPTAB-201ENST00000299314 5701 ntAPPRIS P1 TSL 1 (best) BASIC21.95■■□□□ 1.1
UPK1AO00322 CTF1-201ENST00000279804 1664 ntAPPRIS P3 TSL 1 (best) BASIC21.95■■□□□ 1.1
UPK1AO00322 HTATSF1-201ENST00000218364 2775 ntAPPRIS P1 TSL 1 (best) BASIC21.94■■□□□ 1.1
UPK1AO00322 LONRF2P2-201ENST00000439212 571 ntBASIC21.94■■□□□ 1.1
UPK1AO00322 DNAJB11-201ENST00000265028 1688 ntAPPRIS P1 TSL 1 (best) BASIC21.94■■□□□ 1.1
UPK1AO00322 CCND3-223ENST00000616010 2047 ntTSL 5 BASIC21.94■■□□□ 1.1
UPK1AO00322 CDKN3-202ENST00000335183 893 ntAPPRIS P2 TSL 1 (best) BASIC21.93■■□□□ 1.1
Retrieved 100 of 98,524 protein–RNA pairs in 65.3 ms