Protein–RNA interactions for Protein: A6NKQ9

CGB1, Choriogonadotropin subunit beta variant 1, humanhuman

Predictions only

Length 187 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CGB1A6NKQ9 MPC1-206ENST00000621630 977 ntAPPRIS ALT1 TSL 5 BASIC18.52■□□□□ 0.56
CGB1A6NKQ9 MPC1-207ENST00000621685 1192 ntTSL 5 BASIC18.52■□□□□ 0.56
CGB1A6NKQ9 MTERF3-204ENST00000523821 1529 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
CGB1A6NKQ9 MAP2K2-201ENST00000262948 1734 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.55
CGB1A6NKQ9 TMSB15B-202ENST00000436583 2186 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
CGB1A6NKQ9 AARD-201ENST00000378279 2299 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
CGB1A6NKQ9 FGF22-202ENST00000586042 1288 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
CGB1A6NKQ9 GNAS-AS1_1.1-201ENST00000621898 103 ntBASIC18.51■□□□□ 0.55
CGB1A6NKQ9 ARL4D-201ENST00000320033 1612 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
CGB1A6NKQ9 SUGCT-201ENST00000335693 1645 ntAPPRIS ALT2 TSL 1 (best) BASIC18.51■□□□□ 0.55
CGB1A6NKQ9 RBFOX2-209ENST00000438146 1356 ntAPPRIS P3 TSL 1 (best) BASIC18.51■□□□□ 0.55
CGB1A6NKQ9 HHEX-201ENST00000282728 1727 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
CGB1A6NKQ9 ADPRHL2-201ENST00000373178 1668 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
CGB1A6NKQ9 RNF19B-203ENST00000373456 2560 ntAPPRIS P3 TSL 1 (best) BASIC18.5■□□□□ 0.55
CGB1A6NKQ9 PRR35-201ENST00000409413 2216 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
CGB1A6NKQ9 TMEM150C-201ENST00000449862 1990 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
CGB1A6NKQ9 TTC9-201ENST00000256367 5217 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
CGB1A6NKQ9 CDYL-203ENST00000397588 2184 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
CGB1A6NKQ9 CKB-201ENST00000348956 1709 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
CGB1A6NKQ9 KRT18P60-201ENST00000312876 1297 ntBASIC18.5■□□□□ 0.55
CGB1A6NKQ9 TRIM52-AS1-202ENST00000507434 672 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
CGB1A6NKQ9 FAM222B-205ENST00000577682 549 ntTSL 4 BASIC18.5■□□□□ 0.55
CGB1A6NKQ9 AC129492.7-201ENST00000622992 756 ntBASIC18.5■□□□□ 0.55
CGB1A6NKQ9 C1QL2-201ENST00000272520 2043 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
CGB1A6NKQ9 CTSF-201ENST00000310325 2035 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
CGB1A6NKQ9 KDM3B-201ENST00000314358 6813 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
CGB1A6NKQ9 BRD3-202ENST00000371834 2529 ntAPPRIS ALT2 TSL 1 (best) BASIC18.5■□□□□ 0.55
CGB1A6NKQ9 CTBP1-203ENST00000382952 2467 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
CGB1A6NKQ9 YPEL1-202ENST00000403503 466 ntTSL 3 BASIC18.49■□□□□ 0.55
CGB1A6NKQ9 LINC01233-202ENST00000598832 568 ntTSL 2 BASIC18.49■□□□□ 0.55
CGB1A6NKQ9 FHL2-203ENST00000358129 1578 ntTSL 5 BASIC18.49■□□□□ 0.55
CGB1A6NKQ9 HOMER2-201ENST00000304231 1990 ntAPPRIS P4 TSL 5 BASIC18.49■□□□□ 0.55
CGB1A6NKQ9 ZBTB45-205ENST00000600990 2159 ntAPPRIS P1 TSL 5 BASIC18.49■□□□□ 0.55
CGB1A6NKQ9 TRIOBP-203ENST00000403663 2324 ntAPPRIS ALT2 TSL 1 (best) BASIC18.49■□□□□ 0.55
CGB1A6NKQ9 SHD-204ENST00000599689 1729 ntTSL 5 BASIC18.49■□□□□ 0.55
CGB1A6NKQ9 ATP13A2-215ENST00000617114 1723 ntTSL 5 BASIC18.49■□□□□ 0.55
CGB1A6NKQ9 ATAD3A-203ENST00000378756 2492 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
CGB1A6NKQ9 PPM1J-201ENST00000309276 1863 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
CGB1A6NKQ9 HOMER3-201ENST00000221222 1384 ntAPPRIS ALT1 TSL 5 BASIC18.48■□□□□ 0.55
CGB1A6NKQ9 ABHD17C-201ENST00000258884 2368 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
CGB1A6NKQ9 ABCB10P4-201ENST00000566803 2184 ntBASIC18.48■□□□□ 0.55
CGB1A6NKQ9 NAGLU-201ENST00000225927 2544 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
CGB1A6NKQ9 SLC19A1-202ENST00000380010 1884 ntAPPRIS ALT2 TSL 1 (best) BASIC18.48■□□□□ 0.55
CGB1A6NKQ9 PRMT5-213ENST00000553897 1857 ntTSL 2 BASIC18.48■□□□□ 0.55
CGB1A6NKQ9 MPST-203ENST00000401419 1345 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
CGB1A6NKQ9 DLK2-202ENST00000372485 1572 ntAPPRIS ALT1 TSL 5 BASIC18.47■□□□□ 0.55
CGB1A6NKQ9 NR6A1-201ENST00000344523 1846 ntAPPRIS ALT2 TSL 5 BASIC18.47■□□□□ 0.55
CGB1A6NKQ9 SNX18-201ENST00000326277 2063 ntTSL 2 BASIC18.47■□□□□ 0.55
CGB1A6NKQ9 PTCH1-210ENST00000468211 1254 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
CGB1A6NKQ9 OXLD1-203ENST00000571503 803 ntTSL 2 BASIC18.47■□□□□ 0.55
CGB1A6NKQ9 BRD4-212ENST00000630599 726 ntTSL 2 BASIC18.47■□□□□ 0.55
CGB1A6NKQ9 EIF5A-211ENST00000576930 1439 ntAPPRIS P1 TSL 5 BASIC18.47■□□□□ 0.55
CGB1A6NKQ9 TTLL11-202ENST00000373776 2012 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
CGB1A6NKQ9 RARA-203ENST00000394086 2008 ntTSL 2 BASIC18.47■□□□□ 0.55
CGB1A6NKQ9 ARMC10-202ENST00000323716 2635 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
CGB1A6NKQ9 RNF223-201ENST00000453464 1902 ntAPPRIS P1 TSL 2 BASIC18.47■□□□□ 0.55
CGB1A6NKQ9 VDAC2-203ENST00000332211 1557 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
CGB1A6NKQ9 TRAP1-202ENST00000538171 2052 ntTSL 2 BASIC18.46■□□□□ 0.55
CGB1A6NKQ9 ZFP91-CNTF-201ENST00000389919 2319 ntAPPRIS P5 TSL 2 BASIC18.46■□□□□ 0.55
CGB1A6NKQ9 NKX2-3-202ENST00000622383 1986 ntTSL 5 BASIC18.46■□□□□ 0.55
CGB1A6NKQ9 PPP1CC-206ENST00000550991 1882 ntTSL 2 BASIC18.46■□□□□ 0.55
CGB1A6NKQ9 FAM83F-202ENST00000473717 1917 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
CGB1A6NKQ9 SLIT1-203ENST00000371041 1695 ntTSL 2 BASIC18.46■□□□□ 0.55
CGB1A6NKQ9 MED22-201ENST00000343730 1437 ntAPPRIS P4 TSL 1 (best) BASIC18.46■□□□□ 0.55
CGB1A6NKQ9 FAHD1-203ENST00000427358 1974 ntAPPRIS P1 BASIC18.46■□□□□ 0.55
CGB1A6NKQ9 NAB1-202ENST00000409581 2360 ntAPPRIS P3 TSL 2 BASIC18.46■□□□□ 0.55
CGB1A6NKQ9 ABHD17B-202ENST00000377041 1312 ntAPPRIS P4 TSL 1 (best) BASIC18.46■□□□□ 0.55
CGB1A6NKQ9 ARRDC2-202ENST00000379656 2528 ntTSL 2 BASIC18.46■□□□□ 0.55
CGB1A6NKQ9 CLEC14A-201ENST00000342213 2267 ntAPPRIS P1 BASIC18.46■□□□□ 0.54
CGB1A6NKQ9 SLC4A3-203ENST00000358055 4454 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
CGB1A6NKQ9 HORMAD2-201ENST00000336726 2187 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
CGB1A6NKQ9 GABBR2-201ENST00000259455 5788 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
CGB1A6NKQ9 TMUB1-203ENST00000462940 1549 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
CGB1A6NKQ9 FKBP1A-211ENST00000618612 1518 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
CGB1A6NKQ9 VPS53-211ENST00000571805 2356 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
CGB1A6NKQ9 C17orf49-201ENST00000439424 850 ntAPPRIS P3 TSL 1 (best) BASIC18.45■□□□□ 0.54
CGB1A6NKQ9 FBXO7-206ENST00000452138 1535 ntTSL 2 BASIC18.44■□□□□ 0.54
CGB1A6NKQ9 HOXD9-201ENST00000249499 1870 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
CGB1A6NKQ9 AC090877.2-201ENST00000558441 1738 ntBASIC18.44■□□□□ 0.54
CGB1A6NKQ9 HMG20B-202ENST00000333651 1596 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
CGB1A6NKQ9 C20orf24-203ENST00000373852 1059 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
CGB1A6NKQ9 LONRF2P2-201ENST00000439212 571 ntBASIC18.44■□□□□ 0.54
CGB1A6NKQ9 HERC2P9-201ENST00000507787 1023 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
CGB1A6NKQ9 TCEA1-213ENST00000640041 1171 ntTSL 5 BASIC18.44■□□□□ 0.54
CGB1A6NKQ9 ZNF205-201ENST00000219091 1947 ntAPPRIS P1 TSL 5 BASIC18.44■□□□□ 0.54
CGB1A6NKQ9 LSM8-203ENST00000422760 1920 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
CGB1A6NKQ9 POLE2-201ENST00000216367 1776 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
CGB1A6NKQ9 POLR2H-208ENST00000456318 1802 ntAPPRIS P1 TSL 5 BASIC18.44■□□□□ 0.54
CGB1A6NKQ9 CDIPT-207ENST00000566113 1671 ntTSL 2 BASIC18.44■□□□□ 0.54
CGB1A6NKQ9 RARA-204ENST00000394089 2024 ntAPPRIS P1 TSL 2 BASIC18.44■□□□□ 0.54
CGB1A6NKQ9 SLC25A1-202ENST00000451283 1514 ntTSL 2 BASIC18.44■□□□□ 0.54
CGB1A6NKQ9 BIN1-205ENST00000351659 2365 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
CGB1A6NKQ9 LSR-201ENST00000347609 1880 ntAPPRIS ALT2 TSL 1 (best) BASIC18.43■□□□□ 0.54
CGB1A6NKQ9 ARFIP2-202ENST00000396777 1868 ntAPPRIS P1 TSL 2 BASIC18.43■□□□□ 0.54
CGB1A6NKQ9 LSR-213ENST00000605618 1885 ntAPPRIS ALT2 TSL 1 (best) BASIC18.43■□□□□ 0.54
CGB1A6NKQ9 KCNQ5-205ENST00000370398 6345 ntAPPRIS P3 TSL 1 (best) BASIC18.43■□□□□ 0.54
CGB1A6NKQ9 C21orf2-202ENST00000339818 2233 ntAPPRIS P3 TSL 1 (best) BASIC18.43■□□□□ 0.54
CGB1A6NKQ9 IFI30-201ENST00000407280 1134 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
CGB1A6NKQ9 AL590677.1-201ENST00000438431 380 ntTSL 5 BASIC18.43■□□□□ 0.54
CGB1A6NKQ9 CASK-201ENST00000378154 2494 ntTSL 5 BASIC18.43■□□□□ 0.54
Retrieved 100 of 98,524 protein–RNA pairs in 14.6 ms