Protein–RNA interactions for Protein: A0A1B0GVV1

SMIM35, Small integral membrane protein 35, humanhuman

Predictions only

Length 85 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMIM35A0A1B0GVV1 CCKBR-201ENST00000334619 2121 ntAPPRIS P1 TSL 1 (best) BASIC25.66■■□□□ 1.7
SMIM35A0A1B0GVV1 ARPC5L-202ENST00000353214 2507 ntAPPRIS P1 TSL 2 BASIC25.66■■□□□ 1.7
SMIM35A0A1B0GVV1 TMCO6-201ENST00000252100 1834 ntTSL 1 (best) BASIC25.66■■□□□ 1.7
SMIM35A0A1B0GVV1 AC004448.1-201ENST00000458332 883 ntBASIC25.66■■□□□ 1.7
SMIM35A0A1B0GVV1 AL139246.5-201ENST00000606645 996 ntBASIC25.66■■□□□ 1.7
SMIM35A0A1B0GVV1 AC091060.1-201ENST00000623524 1766 ntBASIC25.66■■□□□ 1.7
SMIM35A0A1B0GVV1 IKBKG-211ENST00000615874 1460 ntTSL 5 BASIC25.66■■□□□ 1.7
SMIM35A0A1B0GVV1 IKBKG-215ENST00000619941 1463 ntTSL 5 BASIC25.66■■□□□ 1.7
SMIM35A0A1B0GVV1 ABL2-203ENST00000392043 2140 ntTSL 1 (best) BASIC25.65■■□□□ 1.7
SMIM35A0A1B0GVV1 PCGF3-202ENST00000400151 1175 ntTSL 2 BASIC25.65■■□□□ 1.7
SMIM35A0A1B0GVV1 NALT1-201ENST00000429224 738 ntTSL 5 BASIC25.65■■□□□ 1.7
SMIM35A0A1B0GVV1 SENCR-201ENST00000526269 1298 ntTSL 1 (best) BASIC25.65■■□□□ 1.7
SMIM35A0A1B0GVV1 RASSF1-AS1-201ENST00000629828 790 ntBASIC25.65■■□□□ 1.7
SMIM35A0A1B0GVV1 FAM107B-205ENST00000378467 2374 ntAPPRIS P1 TSL 1 (best) BASIC25.64■■□□□ 1.7
SMIM35A0A1B0GVV1 PPM1B-202ENST00000345249 1713 ntTSL 1 (best) BASIC25.64■■□□□ 1.7
SMIM35A0A1B0GVV1 MIR638-201ENST00000385237 100 ntBASIC25.64■■□□□ 1.7
SMIM35A0A1B0GVV1 TMEM80-201ENST00000397510 1094 ntAPPRIS P2 TSL 5 BASIC25.64■■□□□ 1.7
SMIM35A0A1B0GVV1 MIR17HG-201ENST00000400282 931 ntTSL 1 (best) BASIC25.64■■□□□ 1.7
SMIM35A0A1B0GVV1 GPX4-213ENST00000622390 1002 ntTSL 5 BASIC25.64■■□□□ 1.7
SMIM35A0A1B0GVV1 MFSD7-202ENST00000347950 1599 ntTSL 2 BASIC25.64■■□□□ 1.69
SMIM35A0A1B0GVV1 DLK2-202ENST00000372485 1572 ntAPPRIS ALT1 TSL 5 BASIC25.64■■□□□ 1.69
SMIM35A0A1B0GVV1 PNCK-215ENST00000447676 1585 ntTSL 2 BASIC25.64■■□□□ 1.69
SMIM35A0A1B0GVV1 E2F5-202ENST00000416274 1728 ntAPPRIS P4 TSL 1 (best) BASIC25.63■■□□□ 1.69
SMIM35A0A1B0GVV1 CRYAA-201ENST00000291554 1139 ntAPPRIS P1 TSL 1 (best) BASIC25.63■■□□□ 1.69
SMIM35A0A1B0GVV1 CDKN2A-208ENST00000498124 880 ntTSL 1 (best) BASIC25.63■■□□□ 1.69
SMIM35A0A1B0GVV1 CA9-204ENST00000617161 1374 ntTSL 1 (best) BASIC25.63■■□□□ 1.69
SMIM35A0A1B0GVV1 AC012123.1-201ENST00000426194 1661 ntTSL 5 BASIC25.63■■□□□ 1.69
SMIM35A0A1B0GVV1 RARA-AS1-201ENST00000581080 1790 ntTSL 1 (best) BASIC25.63■■□□□ 1.69
SMIM35A0A1B0GVV1 SNTB1-202ENST00000517992 2273 ntAPPRIS P1 TSL 1 (best) BASIC25.63■■□□□ 1.69
SMIM35A0A1B0GVV1 AC145676.1-201ENST00000514988 2004 ntBASIC25.63■■□□□ 1.69
SMIM35A0A1B0GVV1 HOMER3-205ENST00000542541 1607 ntAPPRIS P3 TSL 1 (best) BASIC25.63■■□□□ 1.69
SMIM35A0A1B0GVV1 FBXL8-201ENST00000258200 1658 ntAPPRIS P1 TSL 1 (best) BASIC25.62■■□□□ 1.69
SMIM35A0A1B0GVV1 PFKFB4-204ENST00000416568 1575 ntTSL 1 (best) BASIC25.62■■□□□ 1.69
SMIM35A0A1B0GVV1 C1QTNF12-201ENST00000330388 1036 ntAPPRIS P1 TSL 1 (best) BASIC25.62■■□□□ 1.69
SMIM35A0A1B0GVV1 TOLLIP-208ENST00000527938 549 ntTSL 4 BASIC25.62■■□□□ 1.69
SMIM35A0A1B0GVV1 ZNRF1-205ENST00000566250 1069 ntTSL 1 (best) BASIC25.62■■□□□ 1.69
SMIM35A0A1B0GVV1 ZNRF1-206ENST00000567962 1234 ntAPPRIS P1 TSL 1 (best) BASIC25.62■■□□□ 1.69
SMIM35A0A1B0GVV1 C14orf80-204ENST00000392522 1630 ntAPPRIS P4 TSL 5 BASIC25.62■■□□□ 1.69
SMIM35A0A1B0GVV1 PKMYT1-211ENST00000573944 1891 ntAPPRIS P1 TSL 5 BASIC25.62■■□□□ 1.69
SMIM35A0A1B0GVV1 HES5-201ENST00000378453 1306 ntAPPRIS P1 TSL 1 (best) BASIC25.62■■□□□ 1.69
SMIM35A0A1B0GVV1 ACSS1-202ENST00000376726 2244 ntTSL 2 BASIC25.61■■□□□ 1.69
SMIM35A0A1B0GVV1 MIR6089-201ENST00000616698 64 ntBASIC25.61■■□□□ 1.69
SMIM35A0A1B0GVV1 VDAC2-203ENST00000332211 1557 ntAPPRIS P1 TSL 1 (best) BASIC25.61■■□□□ 1.69
SMIM35A0A1B0GVV1 CALM1-203ENST00000544280 1064 ntTSL 1 (best) BASIC25.6■■□□□ 1.69
SMIM35A0A1B0GVV1 PLPPR3-201ENST00000359894 2387 ntAPPRIS P3 TSL 1 (best) BASIC25.6■■□□□ 1.69
SMIM35A0A1B0GVV1 STMN4-201ENST00000265770 1250 ntAPPRIS P1 TSL 1 (best) BASIC25.59■■□□□ 1.69
SMIM35A0A1B0GVV1 ZIC2-201ENST00000376335 2983 ntAPPRIS P1 TSL 1 (best) BASIC25.59■■□□□ 1.69
SMIM35A0A1B0GVV1 CD63-202ENST00000420846 981 ntAPPRIS P1 TSL 5 BASIC25.59■■□□□ 1.69
SMIM35A0A1B0GVV1 RALB-208ENST00000631312 311 ntTSL 5 BASIC25.59■■□□□ 1.69
SMIM35A0A1B0GVV1 TMEM179-204ENST00000556573 1430 ntAPPRIS P1 TSL 3 BASIC25.59■■□□□ 1.69
SMIM35A0A1B0GVV1 GTPBP3-202ENST00000358792 1951 ntAPPRIS P4 TSL 2 BASIC25.58■■□□□ 1.69
SMIM35A0A1B0GVV1 SDSL-202ENST00000403593 1449 ntAPPRIS P1 TSL 1 (best) BASIC25.58■■□□□ 1.69
SMIM35A0A1B0GVV1 AL357078.1-201ENST00000448344 310 ntTSL 4 BASIC25.58■■□□□ 1.69
SMIM35A0A1B0GVV1 SSR2-210ENST00000480567 895 ntAPPRIS P1 TSL 2 BASIC25.58■■□□□ 1.69
SMIM35A0A1B0GVV1 LY6H-205ENST00000615409 980 ntAPPRIS P3 TSL 1 (best) BASIC25.58■■□□□ 1.69
SMIM35A0A1B0GVV1 PICSAR-201ENST00000615826 733 ntTSL 1 (best) BASIC25.58■■□□□ 1.69
SMIM35A0A1B0GVV1 AC110285.6-201ENST00000617652 491 ntBASIC25.58■■□□□ 1.69
SMIM35A0A1B0GVV1 NPB-202ENST00000573081 2154 ntAPPRIS ALT2 BASIC25.58■■□□□ 1.68
SMIM35A0A1B0GVV1 ARRB2-210ENST00000572457 1660 ntTSL 5 BASIC25.58■■□□□ 1.68
SMIM35A0A1B0GVV1 ST3GAL5-214ENST00000638178 2034 ntTSL 5 BASIC25.58■■□□□ 1.68
SMIM35A0A1B0GVV1 ZDHHC20-203ENST00000400590 1869 ntAPPRIS ALT2 TSL 5 BASIC25.57■■□□□ 1.68
SMIM35A0A1B0GVV1 TSPAN13-201ENST00000262067 2093 ntAPPRIS P1 TSL 1 (best) BASIC25.57■■□□□ 1.68
SMIM35A0A1B0GVV1 MSANTD2-201ENST00000239614 2495 ntTSL 2 BASIC25.57■■□□□ 1.68
SMIM35A0A1B0GVV1 UBALD1-201ENST00000283474 1413 ntAPPRIS P1 TSL 1 (best) BASIC25.57■■□□□ 1.68
SMIM35A0A1B0GVV1 HES4-201ENST00000304952 899 ntAPPRIS P1 TSL 1 (best) BASIC25.57■■□□□ 1.68
SMIM35A0A1B0GVV1 CHAC1-201ENST00000444189 1204 ntTSL 1 (best) BASIC25.57■■□□□ 1.68
SMIM35A0A1B0GVV1 C6orf89-201ENST00000355190 1309 ntAPPRIS P3 TSL 1 (best) BASIC25.57■■□□□ 1.68
SMIM35A0A1B0GVV1 KLC1-225ENST00000557575 2188 ntTSL 5 BASIC25.56■■□□□ 1.68
SMIM35A0A1B0GVV1 PLPPR3-204ENST00000520876 2328 ntAPPRIS ALT2 TSL 1 (best) BASIC25.56■■□□□ 1.68
SMIM35A0A1B0GVV1 CHTF8-208ENST00000522091 863 ntTSL 2 BASIC25.56■■□□□ 1.68
SMIM35A0A1B0GVV1 AC136475.3-202ENST00000534742 812 ntTSL 2 BASIC25.56■■□□□ 1.68
SMIM35A0A1B0GVV1 CTBP1-201ENST00000290921 2297 ntTSL 1 (best) BASIC25.56■■□□□ 1.68
SMIM35A0A1B0GVV1 ATG16L2-205ENST00000534905 1614 ntTSL 1 (best) BASIC25.55■■□□□ 1.68
SMIM35A0A1B0GVV1 ALG2-203ENST00000476832 1880 ntAPPRIS P1 TSL 1 (best) BASIC25.55■■□□□ 1.68
SMIM35A0A1B0GVV1 CEBPA-AS1-201ENST00000592982 2198 ntBASIC25.55■■□□□ 1.68
SMIM35A0A1B0GVV1 AUH-201ENST00000303617 1490 ntTSL 1 (best) BASIC25.55■■□□□ 1.68
SMIM35A0A1B0GVV1 AC096631.2-201ENST00000436136 790 ntBASIC25.55■■□□□ 1.68
SMIM35A0A1B0GVV1 SMOX-203ENST00000339123 2074 ntTSL 1 (best) BASIC25.55■■□□□ 1.68
SMIM35A0A1B0GVV1 YWHAH-202ENST00000397492 1879 ntTSL 3 BASIC25.54■■□□□ 1.68
SMIM35A0A1B0GVV1 RFNG-201ENST00000310496 1828 ntAPPRIS P1 TSL 2 BASIC25.53■■□□□ 1.68
SMIM35A0A1B0GVV1 AC131274.2-201ENST00000580697 1507 ntBASIC25.53■■□□□ 1.68
SMIM35A0A1B0GVV1 CNN3-202ENST00000394202 1974 ntTSL 2 BASIC25.53■■□□□ 1.68
SMIM35A0A1B0GVV1 RPUSD1-201ENST00000007264 2050 ntAPPRIS P1 TSL 2 BASIC25.53■■□□□ 1.68
SMIM35A0A1B0GVV1 KDELR3-202ENST00000409006 931 ntTSL 1 (best) BASIC25.53■■□□□ 1.68
SMIM35A0A1B0GVV1 PABPN1-207ENST00000556821 1220 ntTSL 2 BASIC25.53■■□□□ 1.68
SMIM35A0A1B0GVV1 C7orf25-206ENST00000447342 1823 ntTSL 2 BASIC25.53■■□□□ 1.68
SMIM35A0A1B0GVV1 MARCH2-201ENST00000215555 1376 ntAPPRIS P1 TSL 5 BASIC25.53■■□□□ 1.68
SMIM35A0A1B0GVV1 SUMF1-202ENST00000383843 1447 ntTSL 2 BASIC25.53■■□□□ 1.68
SMIM35A0A1B0GVV1 ZKSCAN7-206ENST00000431636 1692 ntTSL 1 (best) BASIC25.52■■□□□ 1.68
SMIM35A0A1B0GVV1 SNHG12-212ENST00000531126 719 ntTSL 1 (best) BASIC25.52■■□□□ 1.68
SMIM35A0A1B0GVV1 ZNF584-205ENST00000596281 575 ntTSL 2 BASIC25.52■■□□□ 1.68
SMIM35A0A1B0GVV1 C19orf12-204ENST00000392276 1912 ntTSL 1 (best) BASIC25.52■■□□□ 1.68
SMIM35A0A1B0GVV1 PXK-201ENST00000302779 1974 ntTSL 1 (best) BASIC25.52■■□□□ 1.68
SMIM35A0A1B0GVV1 PEX7-201ENST00000318471 1464 ntAPPRIS P1 TSL 1 (best) BASIC25.52■■□□□ 1.68
SMIM35A0A1B0GVV1 HSF4-225ENST00000584272 1549 ntTSL 1 (best) BASIC25.52■■□□□ 1.68
SMIM35A0A1B0GVV1 FUT11-202ENST00000394790 2175 ntTSL 1 (best) BASIC25.51■■□□□ 1.67
SMIM35A0A1B0GVV1 SPIRE1-202ENST00000409402 5665 ntAPPRIS ALT2 TSL 1 (best) BASIC25.51■■□□□ 1.67
SMIM35A0A1B0GVV1 DCTPP1-201ENST00000319285 1222 ntAPPRIS P1 TSL 1 (best) BASIC25.51■■□□□ 1.67
SMIM35A0A1B0GVV1 HOXA11-AS1_1.1-201ENST00000613939 98 ntBASIC25.51■■□□□ 1.67
SMIM35A0A1B0GVV1 NKX6-3-201ENST00000518699 1352 ntAPPRIS P1 TSL 5 BASIC25.51■■□□□ 1.67
Retrieved 100 of 98,524 protein–RNA pairs in 17.2 ms