Protein–RNA interactions for Protein: A0A1B0GVQ3

LINC00854, Long intergenic non-protein coding RNA 854, humanhuman

Predictions only

Length 168 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00854A0A1B0GVQ3 AC099805.1-201ENST00000523987 1797 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
LINC00854A0A1B0GVQ3 AC110285.7-201ENST00000624417 1536 ntBASIC20.33■□□□□ 0.85
LINC00854A0A1B0GVQ3 PRODH-203ENST00000357068 2462 ntAPPRIS P3 TSL 1 (best) BASIC20.33■□□□□ 0.85
LINC00854A0A1B0GVQ3 AL391121.1-201ENST00000607967 1349 ntBASIC20.33■□□□□ 0.85
LINC00854A0A1B0GVQ3 RCE1-201ENST00000309657 1485 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
LINC00854A0A1B0GVQ3 TAZ-216ENST00000613002 1485 ntTSL 1 (best) BASIC20.33■□□□□ 0.85
LINC00854A0A1B0GVQ3 TERF2-207ENST00000567296 1129 ntTSL 1 (best) BASIC20.33■□□□□ 0.85
LINC00854A0A1B0GVQ3 UBE2S-203ENST00000589978 496 ntTSL 5 BASIC20.33■□□□□ 0.85
LINC00854A0A1B0GVQ3 CDC16-203ENST00000356221 2203 ntAPPRIS P3 TSL 1 (best) BASIC20.33■□□□□ 0.84
LINC00854A0A1B0GVQ3 SOX4-201ENST00000244745 5852 ntAPPRIS P1 BASIC20.32■□□□□ 0.84
LINC00854A0A1B0GVQ3 DNAJB11-201ENST00000265028 1688 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
LINC00854A0A1B0GVQ3 ARL2BP-201ENST00000219204 2130 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
LINC00854A0A1B0GVQ3 ITGB1BP1-203ENST00000359712 2126 ntTSL 2 BASIC20.32■□□□□ 0.84
LINC00854A0A1B0GVQ3 INPP5J-206ENST00000404453 1613 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
LINC00854A0A1B0GVQ3 CHKA-202ENST00000356135 1755 ntAPPRIS ALT2 TSL 1 (best) BASIC20.32■□□□□ 0.84
LINC00854A0A1B0GVQ3 SMOX-203ENST00000339123 2074 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
LINC00854A0A1B0GVQ3 RPS2-209ENST00000529806 993 ntTSL 3 BASIC20.32■□□□□ 0.84
LINC00854A0A1B0GVQ3 SETD8P1-201ENST00000623146 1180 ntBASIC20.32■□□□□ 0.84
LINC00854A0A1B0GVQ3 ARRDC1-AS1-203ENST00000623970 2210 ntTSL 5 BASIC20.32■□□□□ 0.84
LINC00854A0A1B0GVQ3 LINC01140-202ENST00000467438 2375 ntTSL 2 BASIC20.32■□□□□ 0.84
LINC00854A0A1B0GVQ3 MEIS2-207ENST00000557796 2666 ntTSL 5 BASIC20.32■□□□□ 0.84
LINC00854A0A1B0GVQ3 EYA2-203ENST00000357410 2465 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
LINC00854A0A1B0GVQ3 SMARCD2-201ENST00000225742 1800 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
LINC00854A0A1B0GVQ3 MPPED1-203ENST00000443721 2507 ntAPPRIS P1 TSL 2 BASIC20.31■□□□□ 0.84
LINC00854A0A1B0GVQ3 ADGRA2-201ENST00000315215 6270 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
LINC00854A0A1B0GVQ3 CPNE2-201ENST00000290776 2645 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
LINC00854A0A1B0GVQ3 TRIM67-203ENST00000449018 2166 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
LINC00854A0A1B0GVQ3 C14orf80-203ENST00000354560 1553 ntAPPRIS ALT2 TSL 1 (best) BASIC20.31■□□□□ 0.84
LINC00854A0A1B0GVQ3 ZNF843-201ENST00000315678 2137 ntAPPRIS P2 TSL 2 BASIC20.31■□□□□ 0.84
LINC00854A0A1B0GVQ3 GSX2-202ENST00000503800 1181 ntTSL 5 BASIC20.31■□□□□ 0.84
LINC00854A0A1B0GVQ3 AKT1S1-201ENST00000344175 1760 ntAPPRIS P1 TSL 3 BASIC20.31■□□□□ 0.84
LINC00854A0A1B0GVQ3 FKBP1A-204ENST00000400137 1622 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
LINC00854A0A1B0GVQ3 EEF1D-256ENST00000618139 2238 ntTSL 5 BASIC20.3■□□□□ 0.84
LINC00854A0A1B0GVQ3 MISP3-201ENST00000269720 1424 ntAPPRIS ALT2 TSL 5 BASIC20.3■□□□□ 0.84
LINC00854A0A1B0GVQ3 AC007375.3-201ENST00000600936 2314 ntBASIC20.3■□□□□ 0.84
LINC00854A0A1B0GVQ3 PEX7-203ENST00000541292 945 ntTSL 5 BASIC20.3■□□□□ 0.84
LINC00854A0A1B0GVQ3 GFI1-203ENST00000427103 2693 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
LINC00854A0A1B0GVQ3 UPF1-207ENST00000599848 5311 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
LINC00854A0A1B0GVQ3 KAT5-201ENST00000341318 2296 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
LINC00854A0A1B0GVQ3 LRRC14-201ENST00000292524 5328 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
LINC00854A0A1B0GVQ3 RNF39-201ENST00000244360 2206 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
LINC00854A0A1B0GVQ3 CCR10-203ENST00000591765 1942 ntTSL 3 BASIC20.29■□□□□ 0.84
LINC00854A0A1B0GVQ3 ANKRD9-205ENST00000560748 1413 ntAPPRIS P1 TSL 2 BASIC20.29■□□□□ 0.84
LINC00854A0A1B0GVQ3 KCNQ5-201ENST00000342056 6688 ntAPPRIS ALT1 TSL 5 BASIC20.29■□□□□ 0.84
LINC00854A0A1B0GVQ3 FIZ1-201ENST00000221665 2660 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
LINC00854A0A1B0GVQ3 HOMER2-201ENST00000304231 1990 ntAPPRIS P4 TSL 5 BASIC20.29■□□□□ 0.84
LINC00854A0A1B0GVQ3 CEND1-201ENST00000330106 1649 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
LINC00854A0A1B0GVQ3 AC012629.2-201ENST00000606513 377 ntTSL 5 BASIC20.29■□□□□ 0.84
LINC00854A0A1B0GVQ3 SLC35D2-203ENST00000375259 1361 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
LINC00854A0A1B0GVQ3 SORCS2-203ENST00000507866 6152 ntAPPRIS P2 TSL 1 (best) BASIC20.29■□□□□ 0.84
LINC00854A0A1B0GVQ3 PCSK6-214ENST00000611716 4409 ntAPPRIS P4 TSL 1 (best) BASIC20.29■□□□□ 0.84
LINC00854A0A1B0GVQ3 LOXL1-201ENST00000261921 2351 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
LINC00854A0A1B0GVQ3 MARK2-204ENST00000402010 4728 ntAPPRIS ALT2 TSL 1 (best) BASIC20.28■□□□□ 0.84
LINC00854A0A1B0GVQ3 CTDP1-208ENST00000613122 5866 ntAPPRIS P3 TSL 1 (best) BASIC20.28■□□□□ 0.84
LINC00854A0A1B0GVQ3 C1orf229-201ENST00000623686 2258 ntBASIC20.28■□□□□ 0.84
LINC00854A0A1B0GVQ3 SCLY-201ENST00000254663 2562 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
LINC00854A0A1B0GVQ3 IRX4-201ENST00000231357 2221 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
LINC00854A0A1B0GVQ3 HS3ST3A1-201ENST00000284110 2527 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
LINC00854A0A1B0GVQ3 IRX2-202ENST00000382611 2630 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
LINC00854A0A1B0GVQ3 TCF7-201ENST00000342854 3045 ntAPPRIS P2 TSL 1 (best) BASIC20.28■□□□□ 0.84
LINC00854A0A1B0GVQ3 DRD2-202ENST00000362072 2789 ntAPPRIS P2 TSL 1 (best) BASIC20.28■□□□□ 0.84
LINC00854A0A1B0GVQ3 FAM120A-201ENST00000277165 5118 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
LINC00854A0A1B0GVQ3 COL23A1-201ENST00000390654 3061 ntAPPRIS P2 TSL 5 BASIC20.28■□□□□ 0.84
LINC00854A0A1B0GVQ3 ANKHD1-204ENST00000394722 2035 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
LINC00854A0A1B0GVQ3 SOX8-201ENST00000293894 3049 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
LINC00854A0A1B0GVQ3 NIPA2-203ENST00000398013 2280 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
LINC00854A0A1B0GVQ3 TSEN15-201ENST00000361641 1960 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
LINC00854A0A1B0GVQ3 AC068152.1-210ENST00000574741 836 ntTSL 3 BASIC20.27■□□□□ 0.84
LINC00854A0A1B0GVQ3 DUSP7-202ENST00000495880 3340 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
LINC00854A0A1B0GVQ3 AKT1S1-204ENST00000391832 1911 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
LINC00854A0A1B0GVQ3 VAX1-202ENST00000369206 1723 ntAPPRIS P1 TSL 5 BASIC20.27■□□□□ 0.83
LINC00854A0A1B0GVQ3 SHD-204ENST00000599689 1729 ntTSL 5 BASIC20.27■□□□□ 0.83
LINC00854A0A1B0GVQ3 USP25-202ENST00000285681 5216 ntTSL 1 (best) BASIC20.27■□□□□ 0.83
LINC00854A0A1B0GVQ3 FAM193B-217ENST00000514747 2913 ntAPPRIS P1 TSL 5 BASIC20.26■□□□□ 0.83
LINC00854A0A1B0GVQ3 VGLL2-201ENST00000326274 2212 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
LINC00854A0A1B0GVQ3 TAZ-201ENST00000369776 1596 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
LINC00854A0A1B0GVQ3 HOMER3-202ENST00000392351 1557 ntAPPRIS P3 TSL 1 (best) BASIC20.26■□□□□ 0.83
LINC00854A0A1B0GVQ3 SPTBN4-201ENST00000338932 8686 ntAPPRIS ALT1 TSL 5 BASIC20.26■□□□□ 0.83
LINC00854A0A1B0GVQ3 PHOX2B-201ENST00000226382 3030 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
LINC00854A0A1B0GVQ3 UPF3A-202ENST00000375299 2387 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
LINC00854A0A1B0GVQ3 ZNF664-207ENST00000539644 5108 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
LINC00854A0A1B0GVQ3 MFSD7-201ENST00000322224 2123 ntAPPRIS P3 TSL 1 (best) BASIC20.26■□□□□ 0.83
LINC00854A0A1B0GVQ3 TERT-206ENST00000508104 2486 ntTSL 5 BASIC20.26■□□□□ 0.83
LINC00854A0A1B0GVQ3 TMEM251-202ENST00000415050 1303 ntTSL 2 BASIC20.26■□□□□ 0.83
LINC00854A0A1B0GVQ3 CABP1-202ENST00000316803 1658 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
LINC00854A0A1B0GVQ3 CRACR2B-201ENST00000450448 1663 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
LINC00854A0A1B0GVQ3 SCRT1-201ENST00000569446 3779 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
LINC00854A0A1B0GVQ3 SMIM10L2A-201ENST00000417443 5230 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
LINC00854A0A1B0GVQ3 PNMA6A-201ENST00000421798 2209 ntAPPRIS P1 TSL 2 BASIC20.25■□□□□ 0.83
LINC00854A0A1B0GVQ3 P4HA3-202ENST00000427714 2248 ntTSL 2 BASIC20.25■□□□□ 0.83
LINC00854A0A1B0GVQ3 RARRES2P7-201ENST00000567349 469 ntBASIC20.25■□□□□ 0.83
LINC00854A0A1B0GVQ3 FBXO25-203ENST00000352684 2360 ntTSL 5 BASIC20.25■□□□□ 0.83
LINC00854A0A1B0GVQ3 SLC25A29-201ENST00000359232 2385 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
LINC00854A0A1B0GVQ3 AKT2-234ENST00000579047 2029 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
LINC00854A0A1B0GVQ3 LRIG1-201ENST00000273261 5273 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
LINC00854A0A1B0GVQ3 WWC2-AS2-201ENST00000578387 2183 ntBASIC20.25■□□□□ 0.83
LINC00854A0A1B0GVQ3 TRIP13-201ENST00000166345 2672 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
LINC00854A0A1B0GVQ3 ULK2-202ENST00000395544 6010 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
LINC00854A0A1B0GVQ3 CCDC47-204ENST00000582252 1719 ntTSL 2 BASIC20.24■□□□□ 0.83
LINC00854A0A1B0GVQ3 ZNF668-205ENST00000426488 2282 ntTSL 5 BASIC20.24■□□□□ 0.83
Retrieved 100 of 98,524 protein–RNA pairs in 13.4 ms