Protein–RNA interactions for Protein: A0A0K0K1D8

TRBV6-1, T-cell receptor beta variable 6-1 (Fragment), humanhuman

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRBV6-1A0A0K0K1D8 LSR-202ENST00000354900 2105 ntAPPRIS ALT2 TSL 1 (best) BASIC17.41■□□□□ 0.38
TRBV6-1A0A0K0K1D8 KCNK13-201ENST00000282146 2522 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
TRBV6-1A0A0K0K1D8 DLK2-202ENST00000372485 1572 ntAPPRIS ALT1 TSL 5 BASIC17.4■□□□□ 0.38
TRBV6-1A0A0K0K1D8 SPSB3-208ENST00000566339 1784 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
TRBV6-1A0A0K0K1D8 MRGBP-201ENST00000370487 2781 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
TRBV6-1A0A0K0K1D8 CORO1A-201ENST00000219150 1803 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
TRBV6-1A0A0K0K1D8 POLR2H-208ENST00000456318 1802 ntAPPRIS P1 TSL 5 BASIC17.4■□□□□ 0.38
TRBV6-1A0A0K0K1D8 FUT11-201ENST00000372841 2056 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
TRBV6-1A0A0K0K1D8 CHST6-202ENST00000390664 2093 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
TRBV6-1A0A0K0K1D8 DHH-201ENST00000266991 1936 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
TRBV6-1A0A0K0K1D8 CYP2A13-201ENST00000330436 1739 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
TRBV6-1A0A0K0K1D8 ZNF837-202ENST00000597582 1969 ntAPPRIS P1 TSL 2 BASIC17.4■□□□□ 0.38
TRBV6-1A0A0K0K1D8 LRIG1-202ENST00000383703 5283 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
TRBV6-1A0A0K0K1D8 WDR38-202ENST00000613760 1323 ntAPPRIS ALT2 TSL 1 (best) BASIC17.4■□□□□ 0.38
TRBV6-1A0A0K0K1D8 B3GALNT2-202ENST00000366600 2015 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
TRBV6-1A0A0K0K1D8 PTGER1-201ENST00000292513 1421 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.38
TRBV6-1A0A0K0K1D8 PAPOLA-225ENST00000557471 1421 ntTSL 1 (best) BASIC17.39■□□□□ 0.38
TRBV6-1A0A0K0K1D8 PTX3-201ENST00000295927 1940 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
TRBV6-1A0A0K0K1D8 GRIN2D-201ENST00000263269 5093 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
TRBV6-1A0A0K0K1D8 PFKFB3-201ENST00000317350 1999 ntAPPRIS ALT1 TSL 5 BASIC17.39■□□□□ 0.37
TRBV6-1A0A0K0K1D8 LTC4S-205ENST00000486713 496 ntTSL 2 BASIC17.39■□□□□ 0.37
TRBV6-1A0A0K0K1D8 ZNF706-207ENST00000519882 959 ntAPPRIS P1 TSL 3 BASIC17.39■□□□□ 0.37
TRBV6-1A0A0K0K1D8 ZNF706-213ENST00000521272 732 ntAPPRIS P1 TSL 5 BASIC17.39■□□□□ 0.37
TRBV6-1A0A0K0K1D8 MIR1-1HG-202ENST00000624914 1220 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
TRBV6-1A0A0K0K1D8 ARHGAP27-207ENST00000528273 2319 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
TRBV6-1A0A0K0K1D8 AC233723.2-201ENST00000623798 2106 ntBASIC17.39■□□□□ 0.37
TRBV6-1A0A0K0K1D8 TCF3-203ENST00000395423 2779 ntTSL 5 BASIC17.39■□□□□ 0.37
TRBV6-1A0A0K0K1D8 AC092068.2-201ENST00000590491 1708 ntBASIC17.38■□□□□ 0.37
TRBV6-1A0A0K0K1D8 GNG10-201ENST00000374293 1491 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
TRBV6-1A0A0K0K1D8 DUSP8P3-201ENST00000399571 1760 ntBASIC17.38■□□□□ 0.37
TRBV6-1A0A0K0K1D8 ANOS2P-203ENST00000472227 1816 ntBASIC17.38■□□□□ 0.37
TRBV6-1A0A0K0K1D8 KRT18P10-201ENST00000388836 1287 ntBASIC17.38■□□□□ 0.37
TRBV6-1A0A0K0K1D8 TRAM2-AS1-201ENST00000453216 664 ntTSL 3 BASIC17.38■□□□□ 0.37
TRBV6-1A0A0K0K1D8 MTMR1-214ENST00000542156 1227 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
TRBV6-1A0A0K0K1D8 FOXO3B-201ENST00000395675 1928 ntBASIC17.38■□□□□ 0.37
TRBV6-1A0A0K0K1D8 TANGO2-201ENST00000327374 2273 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
TRBV6-1A0A0K0K1D8 DTNB-210ENST00000407186 2275 ntTSL 5 BASIC17.38■□□□□ 0.37
TRBV6-1A0A0K0K1D8 ZBTB22-208ENST00000431845 2651 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
TRBV6-1A0A0K0K1D8 PDIA6-207ENST00000540494 2509 ntAPPRIS ALT1 TSL 2 BASIC17.38■□□□□ 0.37
TRBV6-1A0A0K0K1D8 CDC16-203ENST00000356221 2203 ntAPPRIS P3 TSL 1 (best) BASIC17.37■□□□□ 0.37
TRBV6-1A0A0K0K1D8 MAGI2-208ENST00000522391 4878 ntAPPRIS ALT2 TSL 5 BASIC17.37■□□□□ 0.37
TRBV6-1A0A0K0K1D8 ZNF174-202ENST00000344823 1557 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
TRBV6-1A0A0K0K1D8 TAF10-201ENST00000299424 1215 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
TRBV6-1A0A0K0K1D8 HOXD-AS2-201ENST00000426965 927 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
TRBV6-1A0A0K0K1D8 CLEC3B-202ENST00000428034 752 ntTSL 2 BASIC17.37■□□□□ 0.37
TRBV6-1A0A0K0K1D8 RPARP-AS1-205ENST00000596045 431 ntTSL 3 BASIC17.37■□□□□ 0.37
TRBV6-1A0A0K0K1D8 TNFRSF10B-202ENST00000347739 1723 ntAPPRIS ALT2 TSL 1 (best) BASIC17.37■□□□□ 0.37
TRBV6-1A0A0K0K1D8 SLC25A29-201ENST00000359232 2385 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
TRBV6-1A0A0K0K1D8 OSCAR-209ENST00000616215 2016 ntAPPRIS ALT2 TSL 5 BASIC17.37■□□□□ 0.37
TRBV6-1A0A0K0K1D8 CNN3-201ENST00000370206 2165 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
TRBV6-1A0A0K0K1D8 C11orf95-202ENST00000433688 5716 ntAPPRIS P1 TSL 5 BASIC17.36■□□□□ 0.37
TRBV6-1A0A0K0K1D8 PON2-202ENST00000433091 1726 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
TRBV6-1A0A0K0K1D8 GNAS-201ENST00000265620 1866 ntAPPRIS P3 TSL 1 (best) BASIC17.36■□□□□ 0.37
TRBV6-1A0A0K0K1D8 MRPL38-201ENST00000309352 1888 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
TRBV6-1A0A0K0K1D8 P2RX2-203ENST00000350048 1344 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
TRBV6-1A0A0K0K1D8 DONSON-202ENST00000303113 2028 ntTSL 5 BASIC17.36■□□□□ 0.37
TRBV6-1A0A0K0K1D8 PKIG-205ENST00000372891 1443 ntAPPRIS P1 TSL 2 BASIC17.36■□□□□ 0.37
TRBV6-1A0A0K0K1D8 KCNAB3-201ENST00000303790 2458 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
TRBV6-1A0A0K0K1D8 CDIPT-207ENST00000566113 1671 ntTSL 2 BASIC17.36■□□□□ 0.37
TRBV6-1A0A0K0K1D8 IL17RE-201ENST00000383814 2704 ntAPPRIS P2 TSL 1 (best) BASIC17.35■□□□□ 0.37
TRBV6-1A0A0K0K1D8 NKAIN3-202ENST00000523211 1988 ntAPPRIS P1 TSL 2 BASIC17.35■□□□□ 0.37
TRBV6-1A0A0K0K1D8 POU2F3-206ENST00000543440 1953 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
TRBV6-1A0A0K0K1D8 DNAAF3-203ENST00000524407 2059 ntAPPRIS ALT2 TSL 1 (best) BASIC17.35■□□□□ 0.37
TRBV6-1A0A0K0K1D8 P2RX5-201ENST00000225328 2309 ntAPPRIS P3 TSL 1 (best) BASIC17.35■□□□□ 0.37
TRBV6-1A0A0K0K1D8 AC016910.1-201ENST00000422799 1046 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
TRBV6-1A0A0K0K1D8 CAPNS1-217ENST00000629983 799 ntTSL 5 BASIC17.35■□□□□ 0.37
TRBV6-1A0A0K0K1D8 PPP2R2D-201ENST00000455566 5738 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
TRBV6-1A0A0K0K1D8 SMPD5-203ENST00000639008 1464 ntBASIC17.35■□□□□ 0.37
TRBV6-1A0A0K0K1D8 DXO-201ENST00000337523 1628 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
TRBV6-1A0A0K0K1D8 USP36-218ENST00000590546 1771 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
TRBV6-1A0A0K0K1D8 HAR1A-201ENST00000433161 1882 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
TRBV6-1A0A0K0K1D8 C6orf136-201ENST00000293604 1978 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
TRBV6-1A0A0K0K1D8 DES-201ENST00000373960 2248 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
TRBV6-1A0A0K0K1D8 GPIHBP1-201ENST00000622500 2282 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
TRBV6-1A0A0K0K1D8 KCTD8-201ENST00000360029 2587 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
TRBV6-1A0A0K0K1D8 PKM-201ENST00000319622 2717 ntAPPRIS P5 TSL 2 BASIC17.34■□□□□ 0.37
TRBV6-1A0A0K0K1D8 BAX-202ENST00000345358 793 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
TRBV6-1A0A0K0K1D8 DOK1-203ENST00000409429 1955 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
TRBV6-1A0A0K0K1D8 NKIRAS2-208ENST00000462043 585 ntTSL 4 BASIC17.34■□□□□ 0.37
TRBV6-1A0A0K0K1D8 STMN4-204ENST00000519997 1623 ntTSL 2 BASIC17.34■□□□□ 0.37
TRBV6-1A0A0K0K1D8 RCCD1-206ENST00000556618 1556 ntAPPRIS P2 TSL 5 BASIC17.34■□□□□ 0.37
TRBV6-1A0A0K0K1D8 HACD3-205ENST00000562901 1797 ntTSL 5 BASIC17.34■□□□□ 0.37
TRBV6-1A0A0K0K1D8 RNF166-209ENST00000567844 633 ntTSL 5 BASIC17.34■□□□□ 0.37
TRBV6-1A0A0K0K1D8 TBX2-AS1-202ENST00000589814 539 ntTSL 3 BASIC17.34■□□□□ 0.37
TRBV6-1A0A0K0K1D8 AL161729.1-201ENST00000604104 1402 ntBASIC17.34■□□□□ 0.37
TRBV6-1A0A0K0K1D8 CACNA1H-201ENST00000348261 8208 ntAPPRIS P4 TSL 1 (best) BASIC17.34■□□□□ 0.37
TRBV6-1A0A0K0K1D8 TMEM102-202ENST00000396568 1962 ntAPPRIS P1 TSL 2 BASIC17.33■□□□□ 0.37
TRBV6-1A0A0K0K1D8 SLC19A1-202ENST00000380010 1884 ntAPPRIS ALT2 TSL 1 (best) BASIC17.33■□□□□ 0.37
TRBV6-1A0A0K0K1D8 SMARCB1-201ENST00000263121 1690 ntAPPRIS P3 TSL 1 (best) BASIC17.33■□□□□ 0.37
TRBV6-1A0A0K0K1D8 CPSF4-207ENST00000451876 1644 ntTSL 5 BASIC17.33■□□□□ 0.37
TRBV6-1A0A0K0K1D8 KLHL21-203ENST00000463043 667 ntTSL 5 BASIC17.33■□□□□ 0.36
TRBV6-1A0A0K0K1D8 MOB2-207ENST00000614710 705 ntTSL 5 BASIC17.33■□□□□ 0.36
TRBV6-1A0A0K0K1D8 UBE2S-201ENST00000264552 2548 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
TRBV6-1A0A0K0K1D8 AC127496.7-201ENST00000625110 1798 ntBASIC17.33■□□□□ 0.36
TRBV6-1A0A0K0K1D8 SHMT1-201ENST00000316694 2464 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
TRBV6-1A0A0K0K1D8 CR559946.2-201ENST00000623684 991 ntBASIC17.32■□□□□ 0.36
TRBV6-1A0A0K0K1D8 CDIPT-201ENST00000219789 2353 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
TRBV6-1A0A0K0K1D8 FAM83D-202ENST00000619850 2361 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
TRBV6-1A0A0K0K1D8 BOP1-205ENST00000569669 2303 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
TRBV6-1A0A0K0K1D8 C7orf25-205ENST00000438029 1743 ntAPPRIS P1 TSL 2 BASIC17.32■□□□□ 0.36
Retrieved 100 of 98,524 protein–RNA pairs in 54.2 ms