Protein–RNA interactions for Protein: A0A0K0K1C4

TRBV27, T-cell receptor beta variable 27 (Fragment), humanhuman

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRBV27A0A0K0K1C4 CMC4-202ENST00000369484 1107 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
TRBV27A0A0K0K1C4 ZNRF2P2-203ENST00000454624 420 ntBASIC16.4■□□□□ 0.22
TRBV27A0A0K0K1C4 TBX2-AS1-202ENST00000589814 539 ntTSL 3 BASIC16.4■□□□□ 0.22
TRBV27A0A0K0K1C4 ARX-201ENST00000379044 2876 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
TRBV27A0A0K0K1C4 CDR2-201ENST00000268383 2702 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
TRBV27A0A0K0K1C4 MAPKAPK5-AS1-201ENST00000428207 2290 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
TRBV27A0A0K0K1C4 MFSD7-201ENST00000322224 2123 ntAPPRIS P3 TSL 1 (best) BASIC16.4■□□□□ 0.22
TRBV27A0A0K0K1C4 NIPSNAP2-201ENST00000322090 1999 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
TRBV27A0A0K0K1C4 WDR38-202ENST00000613760 1323 ntAPPRIS ALT2 TSL 1 (best) BASIC16.4■□□□□ 0.22
TRBV27A0A0K0K1C4 PPIL6-203ENST00000440797 1693 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
TRBV27A0A0K0K1C4 CCDC9-201ENST00000221922 2093 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
TRBV27A0A0K0K1C4 ASF1B-201ENST00000263382 2059 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
TRBV27A0A0K0K1C4 AC098864.1-205ENST00000315302 2260 ntTSL 2 BASIC16.39■□□□□ 0.21
TRBV27A0A0K0K1C4 TSEN54-201ENST00000333213 1944 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
TRBV27A0A0K0K1C4 SEPT4-205ENST00000426861 1906 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
TRBV27A0A0K0K1C4 HSPBP1-202ENST00000433386 1572 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
TRBV27A0A0K0K1C4 CADPS-219ENST00000612439 5455 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
TRBV27A0A0K0K1C4 LURAP1L-201ENST00000319264 1753 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
TRBV27A0A0K0K1C4 CMPK2-202ENST00000404168 2042 ntAPPRIS ALT2 TSL 1 (best) BASIC16.39■□□□□ 0.21
TRBV27A0A0K0K1C4 ELOA-201ENST00000418390 5154 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
TRBV27A0A0K0K1C4 HACD1-202ENST00000361271 2237 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
TRBV27A0A0K0K1C4 ARRDC1-AS1-203ENST00000623970 2210 ntTSL 5 BASIC16.39■□□□□ 0.21
TRBV27A0A0K0K1C4 TSSK1B-201ENST00000390666 2478 ntAPPRIS P1 BASIC16.39■□□□□ 0.21
TRBV27A0A0K0K1C4 AKT1-201ENST00000349310 2866 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
TRBV27A0A0K0K1C4 SLC25A29-201ENST00000359232 2385 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
TRBV27A0A0K0K1C4 CDC16-203ENST00000356221 2203 ntAPPRIS P3 TSL 1 (best) BASIC16.38■□□□□ 0.21
TRBV27A0A0K0K1C4 B3GALNT2-202ENST00000366600 2015 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
TRBV27A0A0K0K1C4 PKIG-205ENST00000372891 1443 ntAPPRIS P1 TSL 2 BASIC16.38■□□□□ 0.21
TRBV27A0A0K0K1C4 DTNB-210ENST00000407186 2275 ntTSL 5 BASIC16.38■□□□□ 0.21
TRBV27A0A0K0K1C4 ACSF2-207ENST00000504392 1881 ntTSL 2 BASIC16.38■□□□□ 0.21
TRBV27A0A0K0K1C4 SMPD5-203ENST00000639008 1464 ntBASIC16.38■□□□□ 0.21
TRBV27A0A0K0K1C4 KLHL21-203ENST00000463043 667 ntTSL 5 BASIC16.38■□□□□ 0.21
TRBV27A0A0K0K1C4 FOXO3B-201ENST00000395675 1928 ntBASIC16.38■□□□□ 0.21
TRBV27A0A0K0K1C4 NRG3-201ENST00000372141 2158 ntAPPRIS P3 TSL 1 (best) BASIC16.38■□□□□ 0.21
TRBV27A0A0K0K1C4 SLC25A29-202ENST00000392908 2242 ntTSL 2 BASIC16.38■□□□□ 0.21
TRBV27A0A0K0K1C4 DLK2-202ENST00000372485 1572 ntAPPRIS ALT1 TSL 5 BASIC16.38■□□□□ 0.21
TRBV27A0A0K0K1C4 TMEM8B-203ENST00000377996 2473 ntTSL 2 BASIC16.38■□□□□ 0.21
TRBV27A0A0K0K1C4 PKM-201ENST00000319622 2717 ntAPPRIS P5 TSL 2 BASIC16.38■□□□□ 0.21
TRBV27A0A0K0K1C4 ITM2C-202ENST00000326427 2078 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
TRBV27A0A0K0K1C4 NAT8L-202ENST00000423729 5870 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
TRBV27A0A0K0K1C4 MYH7B-209ENST00000618182 6197 ntAPPRIS ALT2 TSL 5 BASIC16.37■□□□□ 0.21
TRBV27A0A0K0K1C4 SPAG7-205ENST00000573366 1668 ntTSL 3 BASIC16.37■□□□□ 0.21
TRBV27A0A0K0K1C4 MAPK12-211ENST00000622558 1779 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
TRBV27A0A0K0K1C4 HSD11B1L-206ENST00000423665 1525 ntAPPRIS ALT2 TSL 1 (best) BASIC16.37■□□□□ 0.21
TRBV27A0A0K0K1C4 KRT18P10-201ENST00000388836 1287 ntBASIC16.37■□□□□ 0.21
TRBV27A0A0K0K1C4 MOB2-207ENST00000614710 705 ntTSL 5 BASIC16.37■□□□□ 0.21
TRBV27A0A0K0K1C4 KCTD8-201ENST00000360029 2587 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
TRBV27A0A0K0K1C4 CHST6-202ENST00000390664 2093 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
TRBV27A0A0K0K1C4 GALC-202ENST00000393568 2054 ntTSL 2 BASIC16.37■□□□□ 0.21
TRBV27A0A0K0K1C4 CLDN5-201ENST00000403084 2357 ntBASIC16.37■□□□□ 0.21
TRBV27A0A0K0K1C4 PDIA6-207ENST00000540494 2509 ntAPPRIS ALT1 TSL 2 BASIC16.37■□□□□ 0.21
TRBV27A0A0K0K1C4 KCNAB3-201ENST00000303790 2458 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
TRBV27A0A0K0K1C4 UBE2S-201ENST00000264552 2548 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
TRBV27A0A0K0K1C4 NKAIN3-202ENST00000523211 1988 ntAPPRIS P1 TSL 2 BASIC16.36■□□□□ 0.21
TRBV27A0A0K0K1C4 ZNF837-202ENST00000597582 1969 ntAPPRIS P1 TSL 2 BASIC16.36■□□□□ 0.21
TRBV27A0A0K0K1C4 MPST-206ENST00000429360 1331 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
TRBV27A0A0K0K1C4 P2RX5-201ENST00000225328 2309 ntAPPRIS P3 TSL 1 (best) BASIC16.36■□□□□ 0.21
TRBV27A0A0K0K1C4 ZBTB22-208ENST00000431845 2651 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
TRBV27A0A0K0K1C4 LIMD2-205ENST00000578402 1534 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
TRBV27A0A0K0K1C4 DHH-201ENST00000266991 1936 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
TRBV27A0A0K0K1C4 BOP1-205ENST00000569669 2303 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
TRBV27A0A0K0K1C4 OSCAR-209ENST00000616215 2016 ntAPPRIS ALT2 TSL 5 BASIC16.35■□□□□ 0.21
TRBV27A0A0K0K1C4 CPSF4-207ENST00000451876 1644 ntTSL 5 BASIC16.35■□□□□ 0.21
TRBV27A0A0K0K1C4 CHODL-201ENST00000299295 2548 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
TRBV27A0A0K0K1C4 MCCD1-201ENST00000376191 955 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
TRBV27A0A0K0K1C4 HS3ST6-201ENST00000454677 1273 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
TRBV27A0A0K0K1C4 NKIRAS2-208ENST00000462043 585 ntTSL 4 BASIC16.35■□□□□ 0.21
TRBV27A0A0K0K1C4 RAB6B-203ENST00000469959 500 ntTSL 3 BASIC16.35■□□□□ 0.21
TRBV27A0A0K0K1C4 UBA52-204ENST00000595158 743 ntAPPRIS P1 TSL 3 BASIC16.35■□□□□ 0.21
TRBV27A0A0K0K1C4 TMED4-205ENST00000481238 1755 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
TRBV27A0A0K0K1C4 NIPSNAP1-201ENST00000216121 2237 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
TRBV27A0A0K0K1C4 NKX2-4-201ENST00000351817 2238 ntAPPRIS P1 TSL 5 BASIC16.35■□□□□ 0.21
TRBV27A0A0K0K1C4 ADARB2-202ENST00000381310 1810 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
TRBV27A0A0K0K1C4 POLR2H-208ENST00000456318 1802 ntAPPRIS P1 TSL 5 BASIC16.35■□□□□ 0.21
TRBV27A0A0K0K1C4 TMEM268-202ENST00000374049 4578 ntAPPRIS ALT1 TSL 5 BASIC16.35■□□□□ 0.21
TRBV27A0A0K0K1C4 PTX3-201ENST00000295927 1940 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
TRBV27A0A0K0K1C4 PMS1-220ENST00000618056 1468 ntTSL 5 BASIC16.35■□□□□ 0.21
TRBV27A0A0K0K1C4 NRG2-201ENST00000289409 2535 ntAPPRIS ALT2 TSL 5 BASIC16.35■□□□□ 0.21
TRBV27A0A0K0K1C4 PHACTR2-208ENST00000440869 2569 ntAPPRIS ALT2 TSL 2 BASIC16.34■□□□□ 0.21
TRBV27A0A0K0K1C4 RCCD1-206ENST00000556618 1556 ntAPPRIS P2 TSL 5 BASIC16.34■□□□□ 0.21
TRBV27A0A0K0K1C4 MTMR14-202ENST00000351233 2105 ntAPPRIS ALT2 TSL 1 (best) BASIC16.34■□□□□ 0.21
TRBV27A0A0K0K1C4 SRSF11-203ENST00000370951 2385 ntAPPRIS ALT2 TSL 1 (best) BASIC16.34■□□□□ 0.21
TRBV27A0A0K0K1C4 SHMT1-201ENST00000316694 2464 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
TRBV27A0A0K0K1C4 AC016910.1-201ENST00000422799 1046 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
TRBV27A0A0K0K1C4 LINC01918-201ENST00000436841 797 ntTSL 2 BASIC16.34■□□□□ 0.21
TRBV27A0A0K0K1C4 RPS2P35-201ENST00000443417 897 ntBASIC16.34■□□□□ 0.21
TRBV27A0A0K0K1C4 RPS20-211ENST00000524349 752 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
TRBV27A0A0K0K1C4 AC060814.1-201ENST00000554326 538 ntBASIC16.34■□□□□ 0.21
TRBV27A0A0K0K1C4 AKT1S1-204ENST00000391832 1911 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
TRBV27A0A0K0K1C4 REST-210ENST00000638187 1334 ntTSL 5 BASIC16.34■□□□□ 0.21
TRBV27A0A0K0K1C4 NCK2-201ENST00000233154 2683 ntAPPRIS P1 TSL 5 BASIC16.34■□□□□ 0.21
TRBV27A0A0K0K1C4 TM9SF3-201ENST00000371142 6141 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
TRBV27A0A0K0K1C4 AC233723.2-201ENST00000623798 2106 ntBASIC16.34■□□□□ 0.21
TRBV27A0A0K0K1C4 MEIOB-202ENST00000397344 1792 ntTSL 5 BASIC16.33■□□□□ 0.21
TRBV27A0A0K0K1C4 ANXA8-204ENST00000583911 1874 ntTSL 2 BASIC16.33■□□□□ 0.21
TRBV27A0A0K0K1C4 PFKFB3-201ENST00000317350 1999 ntAPPRIS ALT1 TSL 5 BASIC16.33■□□□□ 0.21
TRBV27A0A0K0K1C4 POU2F3-206ENST00000543440 1953 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.21
TRBV27A0A0K0K1C4 ACTL10-201ENST00000330271 2028 ntAPPRIS P1 BASIC16.33■□□□□ 0.21
TRBV27A0A0K0K1C4 DNAAF3-203ENST00000524407 2059 ntAPPRIS ALT2 TSL 1 (best) BASIC16.33■□□□□ 0.21
TRBV27A0A0K0K1C4 ARHGAP27-207ENST00000528273 2319 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
Retrieved 100 of 98,524 protein–RNA pairs in 15.7 ms