Protein–RNA interactions for Protein: A0A0B4J1Z2

IGKV1D-43, Immunoglobulin kappa variable 1D-43, humanhuman

Predictions only

Length 117 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
IGKV1D-43A0A0B4J1Z2 NFU1-203ENST00000410022 1467 ntAPPRIS P3 TSL 1 (best) BASIC20.59■□□□□ 0.89
IGKV1D-43A0A0B4J1Z2 KCTD5-202ENST00000564195 774 ntTSL 5 BASIC20.59■□□□□ 0.89
IGKV1D-43A0A0B4J1Z2 EME2-205ENST00000568449 1234 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
IGKV1D-43A0A0B4J1Z2 BHLHE23-202ENST00000612929 1109 ntBASIC20.59■□□□□ 0.89
IGKV1D-43A0A0B4J1Z2 AC012354.3-201ENST00000623734 483 ntBASIC20.59■□□□□ 0.89
IGKV1D-43A0A0B4J1Z2 ATAD3B-201ENST00000308647 2448 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
IGKV1D-43A0A0B4J1Z2 KLC3-202ENST00000470402 1820 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
IGKV1D-43A0A0B4J1Z2 SLC9A3-201ENST00000264938 2584 ntAPPRIS P3 TSL 1 (best) BASIC20.59■□□□□ 0.89
IGKV1D-43A0A0B4J1Z2 PCSK6-218ENST00000619160 3093 ntAPPRIS ALT2 TSL 1 (best) BASIC20.59■□□□□ 0.89
IGKV1D-43A0A0B4J1Z2 RAX2-202ENST00000555978 2145 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
IGKV1D-43A0A0B4J1Z2 ZNF444-211ENST00000592949 1906 ntAPPRIS ALT2 TSL 1 (best) BASIC20.59■□□□□ 0.89
IGKV1D-43A0A0B4J1Z2 MAP2K2-201ENST00000262948 1734 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
IGKV1D-43A0A0B4J1Z2 PRRX2-201ENST00000372469 1311 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
IGKV1D-43A0A0B4J1Z2 KAT5-208ENST00000530446 1697 ntTSL 1 (best) BASIC20.58■□□□□ 0.89
IGKV1D-43A0A0B4J1Z2 AL033527.3-201ENST00000566366 1196 ntBASIC20.58■□□□□ 0.89
IGKV1D-43A0A0B4J1Z2 AC010980.1-201ENST00000587192 1142 ntBASIC20.58■□□□□ 0.89
IGKV1D-43A0A0B4J1Z2 AC019171.1-201ENST00000601251 1056 ntBASIC20.58■□□□□ 0.89
IGKV1D-43A0A0B4J1Z2 RBM33-201ENST00000287912 1404 ntTSL 2 BASIC20.58■□□□□ 0.88
IGKV1D-43A0A0B4J1Z2 HSD11B2-201ENST00000326152 1900 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
IGKV1D-43A0A0B4J1Z2 SEPT2-205ENST00000401990 1734 ntTSL 1 (best) BASIC20.58■□□□□ 0.88
IGKV1D-43A0A0B4J1Z2 SLC35B2-204ENST00000537814 1715 ntTSL 2 BASIC20.58■□□□□ 0.88
IGKV1D-43A0A0B4J1Z2 BEX3-202ENST00000372634 753 ntTSL 2 BASIC20.57■□□□□ 0.88
IGKV1D-43A0A0B4J1Z2 IDNK-201ENST00000376417 511 ntTSL 5 BASIC20.57■□□□□ 0.88
IGKV1D-43A0A0B4J1Z2 IDNK-202ENST00000376419 692 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
IGKV1D-43A0A0B4J1Z2 ZSCAN1-202ENST00000391700 952 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
IGKV1D-43A0A0B4J1Z2 C5orf38-202ENST00000397835 681 ntAPPRIS ALT2 TSL 5 BASIC20.57■□□□□ 0.88
IGKV1D-43A0A0B4J1Z2 MTX2-204ENST00000443241 799 ntTSL 3 BASIC20.57■□□□□ 0.88
IGKV1D-43A0A0B4J1Z2 FAHD1-203ENST00000427358 1974 ntAPPRIS P1 BASIC20.57■□□□□ 0.88
IGKV1D-43A0A0B4J1Z2 R3HDM4-201ENST00000361574 1815 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
IGKV1D-43A0A0B4J1Z2 AC145124.1-201ENST00000528514 1361 ntTSL 2 BASIC20.57■□□□□ 0.88
IGKV1D-43A0A0B4J1Z2 SUGCT-201ENST00000335693 1645 ntAPPRIS ALT2 TSL 1 (best) BASIC20.56■□□□□ 0.88
IGKV1D-43A0A0B4J1Z2 DYRK3-203ENST00000367109 2163 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
IGKV1D-43A0A0B4J1Z2 FAM57A-202ENST00000308278 2412 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
IGKV1D-43A0A0B4J1Z2 MAZ-201ENST00000219782 2698 ntAPPRIS P4 TSL 1 (best) BASIC20.56■□□□□ 0.88
IGKV1D-43A0A0B4J1Z2 SNX10-207ENST00000446848 2613 ntAPPRIS P2 TSL 1 (best) BASIC20.56■□□□□ 0.88
IGKV1D-43A0A0B4J1Z2 FAM162B-201ENST00000368557 1036 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
IGKV1D-43A0A0B4J1Z2 SSSCA1-AS1-201ENST00000567594 614 ntBASIC20.56■□□□□ 0.88
IGKV1D-43A0A0B4J1Z2 MMP25-AS1-209ENST00000576250 779 ntTSL 5 BASIC20.56■□□□□ 0.88
IGKV1D-43A0A0B4J1Z2 MROH6-202ENST00000524906 1794 ntAPPRIS ALT2 TSL 3 BASIC20.56■□□□□ 0.88
IGKV1D-43A0A0B4J1Z2 RAB11FIP1-203ENST00000522727 1866 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
IGKV1D-43A0A0B4J1Z2 HHEX-201ENST00000282728 1727 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
IGKV1D-43A0A0B4J1Z2 FJX1-201ENST00000317811 2450 ntAPPRIS P1 BASIC20.55■□□□□ 0.88
IGKV1D-43A0A0B4J1Z2 CSNK1G3-207ENST00000512718 1569 ntTSL 2 BASIC20.55■□□□□ 0.88
IGKV1D-43A0A0B4J1Z2 FAM83F-202ENST00000473717 1917 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
IGKV1D-43A0A0B4J1Z2 ADPRHL2-201ENST00000373178 1668 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
IGKV1D-43A0A0B4J1Z2 CST6-201ENST00000312134 759 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
IGKV1D-43A0A0B4J1Z2 ILDR2-208ENST00000529387 1238 ntTSL 5 BASIC20.55■□□□□ 0.88
IGKV1D-43A0A0B4J1Z2 SNF8-202ENST00000502492 2319 ntAPPRIS P3 TSL 1 (best) BASIC20.55■□□□□ 0.88
IGKV1D-43A0A0B4J1Z2 ABCB10P4-201ENST00000566803 2184 ntBASIC20.55■□□□□ 0.88
IGKV1D-43A0A0B4J1Z2 CDIPT-207ENST00000566113 1671 ntTSL 2 BASIC20.54■□□□□ 0.88
IGKV1D-43A0A0B4J1Z2 TMEM171-202ENST00000454765 1535 ntAPPRIS P3 TSL 1 (best) BASIC20.54■□□□□ 0.88
IGKV1D-43A0A0B4J1Z2 H2AFY-204ENST00000423969 924 ntTSL 2 BASIC20.54■□□□□ 0.88
IGKV1D-43A0A0B4J1Z2 FAM120C-203ENST00000477084 1140 ntAPPRIS ALT2 TSL 1 (best) BASIC20.54■□□□□ 0.88
IGKV1D-43A0A0B4J1Z2 QDPR-208ENST00000513615 1188 ntTSL 2 BASIC20.54■□□□□ 0.88
IGKV1D-43A0A0B4J1Z2 PPP1R26-201ENST00000356818 4932 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
IGKV1D-43A0A0B4J1Z2 KLC3-201ENST00000391946 1780 ntAPPRIS P2 TSL 1 (best) BASIC20.54■□□□□ 0.88
IGKV1D-43A0A0B4J1Z2 OSCAR-205ENST00000359649 1892 ntAPPRIS P4 TSL 2 BASIC20.54■□□□□ 0.88
IGKV1D-43A0A0B4J1Z2 FAM21EP-202ENST00000456967 2177 ntTSL 2 BASIC20.53■□□□□ 0.88
IGKV1D-43A0A0B4J1Z2 MADCAM1-202ENST00000346144 1309 ntAPPRIS ALT2 TSL 1 (best) BASIC20.53■□□□□ 0.88
IGKV1D-43A0A0B4J1Z2 EGFL8-220ENST00000395512 1312 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
IGKV1D-43A0A0B4J1Z2 ERGIC1-202ENST00000393784 2881 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
IGKV1D-43A0A0B4J1Z2 LINC02043-201ENST00000419745 1832 ntTSL 2 BASIC20.53■□□□□ 0.88
IGKV1D-43A0A0B4J1Z2 ATXN3-252ENST00000620536 1044 ntTSL 5 BASIC20.53■□□□□ 0.88
IGKV1D-43A0A0B4J1Z2 ATXN3-253ENST00000621269 936 ntTSL 5 BASIC20.53■□□□□ 0.88
IGKV1D-43A0A0B4J1Z2 ATP5A1-220ENST00000593152 2258 ntTSL 2 BASIC20.53■□□□□ 0.88
IGKV1D-43A0A0B4J1Z2 ROR1-202ENST00000371080 2305 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
IGKV1D-43A0A0B4J1Z2 TMEM44-202ENST00000347147 2245 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
IGKV1D-43A0A0B4J1Z2 GBX2-201ENST00000306318 2123 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
IGKV1D-43A0A0B4J1Z2 POLR2H-208ENST00000456318 1802 ntAPPRIS P1 TSL 5 BASIC20.53■□□□□ 0.88
IGKV1D-43A0A0B4J1Z2 SHD-204ENST00000599689 1729 ntTSL 5 BASIC20.53■□□□□ 0.88
IGKV1D-43A0A0B4J1Z2 PROSER2-202ENST00000379200 1232 ntAPPRIS ALT2 BASIC20.52■□□□□ 0.88
IGKV1D-43A0A0B4J1Z2 VSTM2A-202ENST00000402613 1076 ntTSL 2 BASIC20.52■□□□□ 0.88
IGKV1D-43A0A0B4J1Z2 HAGHL-205ENST00000561546 1041 ntTSL 2 BASIC20.52■□□□□ 0.88
IGKV1D-43A0A0B4J1Z2 NDEL1-219ENST00000585098 454 ntTSL 3 BASIC20.52■□□□□ 0.88
IGKV1D-43A0A0B4J1Z2 BTBD6-201ENST00000327471 1948 ntAPPRIS ALT2 TSL 2 BASIC20.51■□□□□ 0.87
IGKV1D-43A0A0B4J1Z2 CT47A7-201ENST00000434883 1288 ntAPPRIS P1 TSL 2 BASIC20.51■□□□□ 0.87
IGKV1D-43A0A0B4J1Z2 C9orf147-202ENST00000457681 561 ntTSL 2 BASIC20.51■□□□□ 0.87
IGKV1D-43A0A0B4J1Z2 DSG2-202ENST00000585206 1081 ntTSL 2 BASIC20.51■□□□□ 0.87
IGKV1D-43A0A0B4J1Z2 MATK-204ENST00000585778 1994 ntAPPRIS ALT2 TSL 1 (best) BASIC20.51■□□□□ 0.87
IGKV1D-43A0A0B4J1Z2 PAOX-206ENST00000480071 1324 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
IGKV1D-43A0A0B4J1Z2 CBWD2-201ENST00000259199 1812 ntAPPRIS P3 TSL 1 (best) BASIC20.5■□□□□ 0.87
IGKV1D-43A0A0B4J1Z2 ZFP91-CNTF-201ENST00000389919 2319 ntAPPRIS P5 TSL 2 BASIC20.5■□□□□ 0.87
IGKV1D-43A0A0B4J1Z2 PXK-201ENST00000302779 1974 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
IGKV1D-43A0A0B4J1Z2 HOMER2-201ENST00000304231 1990 ntAPPRIS P4 TSL 5 BASIC20.5■□□□□ 0.87
IGKV1D-43A0A0B4J1Z2 PRMT5-213ENST00000553897 1857 ntTSL 2 BASIC20.5■□□□□ 0.87
IGKV1D-43A0A0B4J1Z2 NAGLU-201ENST00000225927 2544 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
IGKV1D-43A0A0B4J1Z2 C1QL2-201ENST00000272520 2043 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
IGKV1D-43A0A0B4J1Z2 HNRNPUL1-221ENST00000617305 1018 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
IGKV1D-43A0A0B4J1Z2 AC074183.2-201ENST00000623112 922 ntBASIC20.5■□□□□ 0.87
IGKV1D-43A0A0B4J1Z2 TMSB15B-202ENST00000436583 2186 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
IGKV1D-43A0A0B4J1Z2 SLC35A2-201ENST00000247138 1672 ntAPPRIS P3 TSL 1 (best) BASIC20.5■□□□□ 0.87
IGKV1D-43A0A0B4J1Z2 BOP1-205ENST00000569669 2303 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
IGKV1D-43A0A0B4J1Z2 ZNF205-201ENST00000219091 1947 ntAPPRIS P1 TSL 5 BASIC20.49■□□□□ 0.87
IGKV1D-43A0A0B4J1Z2 PPP2R2C-203ENST00000382599 1807 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
IGKV1D-43A0A0B4J1Z2 ZNF606-203ENST00000547121 1196 ntTSL 2 BASIC20.49■□□□□ 0.87
IGKV1D-43A0A0B4J1Z2 MOB4-204ENST00000409360 1447 ntTSL 5 BASIC20.49■□□□□ 0.87
IGKV1D-43A0A0B4J1Z2 CTSF-201ENST00000310325 2035 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
IGKV1D-43A0A0B4J1Z2 RNF223-201ENST00000453464 1902 ntAPPRIS P1 TSL 2 BASIC20.49■□□□□ 0.87
IGKV1D-43A0A0B4J1Z2 FOXA2-201ENST00000377115 2401 ntAPPRIS P3 TSL 1 (best) BASIC20.48■□□□□ 0.87
IGKV1D-43A0A0B4J1Z2 MZT2B-201ENST00000281871 933 ntAPPRIS P3 TSL 1 (best) BASIC20.48■□□□□ 0.87
Retrieved 100 of 98,524 protein–RNA pairs in 15.8 ms