Protein–RNA interactions for Protein: Q9UBY8

CLN8, Protein CLN8, humanhuman

Predictions only

Length 286 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLN8Q9UBY8 CTXND1-201ENST00000560778 6890 ntAPPRIS P1 TSL 3 BASIC13.21□□□□□ -0.3
CLN8Q9UBY8 NPY5R-203ENST00000515560 3183 ntAPPRIS P1 TSL 2 BASIC13.21□□□□□ -0.3
CLN8Q9UBY8 ASTN2-201ENST00000288520 2356 ntTSL 1 (best) BASIC13.21□□□□□ -0.3
CLN8Q9UBY8 ANXA4-202ENST00000409920 1414 ntTSL 1 (best) BASIC13.21□□□□□ -0.3
CLN8Q9UBY8 SLC43A1-204ENST00000528450 2358 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.3
CLN8Q9UBY8 PPP3CA-207ENST00000512215 4007 ntTSL 1 (best) BASIC13.21□□□□□ -0.3
CLN8Q9UBY8 TIPRL-202ENST00000367833 3032 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.3
CLN8Q9UBY8 CRLF2-203ENST00000400841 1639 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.3
CLN8Q9UBY8 RASA4B-207ENST00000541662 2794 ntAPPRIS P2 TSL 2 BASIC13.2□□□□□ -0.3
CLN8Q9UBY8 SLC39A8-202ENST00000394833 3238 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
CLN8Q9UBY8 DEGS2-201ENST00000305631 4352 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
CLN8Q9UBY8 CRK-201ENST00000300574 3880 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
CLN8Q9UBY8 SPATA20-201ENST00000006658 2719 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
CLN8Q9UBY8 DEPDC7-202ENST00000311388 2012 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
CLN8Q9UBY8 ARHGAP11B-210ENST00000622744 2042 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
CLN8Q9UBY8 LRRFIP1P1-201ENST00000498774 2246 ntBASIC13.2□□□□□ -0.3
CLN8Q9UBY8 MGAT1-202ENST00000333055 8863 ntAPPRIS P1 TSL 2 BASIC13.2□□□□□ -0.3
CLN8Q9UBY8 MAPT-215ENST00000574436 1326 ntAPPRIS ALT2 TSL 5 BASIC13.2□□□□□ -0.3
CLN8Q9UBY8 QRICH1-202ENST00000395443 3549 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
CLN8Q9UBY8 LTA-214ENST00000454783 1507 ntAPPRIS P1 TSL 2 BASIC13.2□□□□□ -0.3
CLN8Q9UBY8 GSPT1-202ENST00000434724 7105 ntAPPRIS P4 TSL 1 (best) BASIC13.2□□□□□ -0.3
CLN8Q9UBY8 SLC25A33-201ENST00000302692 3854 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
CLN8Q9UBY8 CYP51A1-201ENST00000003100 3210 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
CLN8Q9UBY8 CLEC16A-203ENST00000409790 6891 ntAPPRIS P1 TSL 5 BASIC13.2□□□□□ -0.3
CLN8Q9UBY8 TRAPPC8-201ENST00000283351 6226 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
CLN8Q9UBY8 CSNK1A1-202ENST00000377843 2559 ntAPPRIS ALT1 TSL 1 (best) BASIC13.2□□□□□ -0.3
CLN8Q9UBY8 MRPL55-201ENST00000295008 632 ntAPPRIS P1 TSL 2 BASIC13.2□□□□□ -0.3
CLN8Q9UBY8 MRPL16-201ENST00000300151 1182 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
CLN8Q9UBY8 MORN4-202ENST00000370635 419 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
CLN8Q9UBY8 FAM166B-201ENST00000399742 958 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
CLN8Q9UBY8 LINC00229-201ENST00000443783 500 ntTSL 2 BASIC13.2□□□□□ -0.3
CLN8Q9UBY8 SPTLC1P1-201ENST00000447199 261 ntBASIC13.2□□□□□ -0.3
CLN8Q9UBY8 AL033519.3-201ENST00000450618 595 ntTSL 5 BASIC13.2□□□□□ -0.3
CLN8Q9UBY8 SLC35B4-204ENST00000470969 1033 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
CLN8Q9UBY8 DOC2GP-202ENST00000514950 1163 ntBASIC13.2□□□□□ -0.3
CLN8Q9UBY8 SYBU-219ENST00000528647 2995 ntAPPRIS P4 TSL 2 BASIC13.2□□□□□ -0.3
CLN8Q9UBY8 AL928654.4-206ENST00000551180 980 ntAPPRIS ALT2 TSL 5 BASIC13.2□□□□□ -0.3
CLN8Q9UBY8 NDUFA4L2-206ENST00000556732 883 ntTSL 3 BASIC13.2□□□□□ -0.3
CLN8Q9UBY8 AC026471.2-201ENST00000569782 655 ntTSL 2 BASIC13.2□□□□□ -0.3
CLN8Q9UBY8 AC129507.1-201ENST00000570711 1013 ntTSL 2 BASIC13.2□□□□□ -0.3
CLN8Q9UBY8 AC138207.8-201ENST00000579692 739 ntTSL 3 BASIC13.2□□□□□ -0.3
CLN8Q9UBY8 AC004461.2-201ENST00000629517 803 ntBASIC13.2□□□□□ -0.3
CLN8Q9UBY8 GRAMD2B-201ENST00000285689 3175 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
CLN8Q9UBY8 RNASE4-203ENST00000555835 2520 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
CLN8Q9UBY8 DIXDC1-201ENST00000440460 5897 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
CLN8Q9UBY8 GTF2IRD1-205ENST00000476977 5868 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
CLN8Q9UBY8 PARP16-201ENST00000261888 2731 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
CLN8Q9UBY8 TNRC18P2-201ENST00000417666 2714 ntBASIC13.2□□□□□ -0.3
CLN8Q9UBY8 PITX2-204ENST00000394595 1693 ntTSL 5 BASIC13.2□□□□□ -0.3
CLN8Q9UBY8 ESR2-209ENST00000555278 1883 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
CLN8Q9UBY8 RASGEF1C-206ENST00000522500 2055 ntTSL 2 BASIC13.2□□□□□ -0.3
CLN8Q9UBY8 ABCG5-202ENST00000405322 2896 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
CLN8Q9UBY8 POLR1D-207ENST00000621089 1606 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
CLN8Q9UBY8 LOX-206ENST00000639739 1626 ntTSL 5 BASIC13.2□□□□□ -0.3
CLN8Q9UBY8 SLC5A7-202ENST00000409059 2032 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
CLN8Q9UBY8 ACP2-201ENST00000256997 2203 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
CLN8Q9UBY8 ZNF451-201ENST00000357489 4998 ntAPPRIS P3 TSL 1 (best) BASIC13.2□□□□□ -0.3
CLN8Q9UBY8 INTS4P1-202ENST00000587624 2985 ntTSL 5 BASIC13.2□□□□□ -0.3
CLN8Q9UBY8 ISLR-201ENST00000249842 2371 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
CLN8Q9UBY8 ACOX3-202ENST00000413009 2374 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
CLN8Q9UBY8 SLC22A6-203ENST00000421062 1560 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
CLN8Q9UBY8 AKAP9-205ENST00000394564 1356 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
CLN8Q9UBY8 BRF1-203ENST00000379937 3314 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
CLN8Q9UBY8 CDCP2-201ENST00000371330 2723 ntAPPRIS P2 TSL 2 BASIC13.19□□□□□ -0.3
CLN8Q9UBY8 UROC1-202ENST00000383579 2735 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
CLN8Q9UBY8 MTA1-202ENST00000405646 2709 ntAPPRIS ALT2 TSL 5 BASIC13.19□□□□□ -0.3
CLN8Q9UBY8 CYB561D1-201ENST00000310611 5009 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
CLN8Q9UBY8 HOXA3-202ENST00000396352 3263 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
CLN8Q9UBY8 CHRFAM7A-203ENST00000401522 1913 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
CLN8Q9UBY8 DKFZP434H168-201ENST00000567381 1905 ntBASIC13.19□□□□□ -0.3
CLN8Q9UBY8 GOLGA2P7-202ENST00000400817 2850 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
CLN8Q9UBY8 ANKMY1-207ENST00000403283 2874 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
CLN8Q9UBY8 CNKSR1-214ENST00000531191 2673 ntTSL 5 BASIC13.19□□□□□ -0.3
CLN8Q9UBY8 FKBP6-202ENST00000413573 1507 ntTSL 5 BASIC13.19□□□□□ -0.3
CLN8Q9UBY8 DIP2A-201ENST00000400274 7023 ntAPPRIS ALT2 TSL 5 BASIC13.19□□□□□ -0.3
CLN8Q9UBY8 MARVELD1-201ENST00000285605 3221 ntAPPRIS P1 TSL 2 BASIC13.19□□□□□ -0.3
CLN8Q9UBY8 CES4A-207ENST00000540947 2284 ntAPPRIS P2 TSL 2 BASIC13.19□□□□□ -0.3
CLN8Q9UBY8 FAM192A-201ENST00000309137 2848 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
CLN8Q9UBY8 CCDC144A-202ENST00000340621 2214 ntTSL 2 BASIC13.19□□□□□ -0.3
CLN8Q9UBY8 ITSN1-212ENST00000399367 5722 ntAPPRIS ALT1 TSL 1 (best) BASIC13.19□□□□□ -0.3
CLN8Q9UBY8 PIMREG-201ENST00000250056 1473 ntAPPRIS ALT2 TSL 1 (best) BASIC13.19□□□□□ -0.3
CLN8Q9UBY8 FUT7-201ENST00000314412 2584 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
CLN8Q9UBY8 PPP1R21-201ENST00000281394 3137 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
CLN8Q9UBY8 JAKMIP1-204ENST00000409831 2371 ntAPPRIS P1 TSL 2 BASIC13.19□□□□□ -0.3
CLN8Q9UBY8 NPM2-201ENST00000289820 1100 ntAPPRIS P2 TSL 1 (best) BASIC13.19□□□□□ -0.3
CLN8Q9UBY8 ZSCAN2-203ENST00000334141 993 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
CLN8Q9UBY8 SPDYE19P-201ENST00000338590 713 ntBASIC13.19□□□□□ -0.3
CLN8Q9UBY8 SFT2D1-201ENST00000361731 1079 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
CLN8Q9UBY8 LCE1E-201ENST00000368770 1180 ntAPPRIS P2 TSL 1 (best) BASIC13.19□□□□□ -0.3
CLN8Q9UBY8 LCE3E-201ENST00000368789 611 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
CLN8Q9UBY8 AGER-204ENST00000375067 1250 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
CLN8Q9UBY8 MAP9-202ENST00000379248 1165 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
CLN8Q9UBY8 IDH3B-202ENST00000380851 1230 ntAPPRIS ALT1 TSL 1 (best) BASIC13.19□□□□□ -0.3
CLN8Q9UBY8 NPM2-202ENST00000381530 925 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
CLN8Q9UBY8 NUDT1-205ENST00000397048 783 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
CLN8Q9UBY8 RASL12-203ENST00000434605 982 ntTSL 2 BASIC13.19□□□□□ -0.3
CLN8Q9UBY8 LEPROTL1-202ENST00000442880 908 ntTSL 2 BASIC13.19□□□□□ -0.3
CLN8Q9UBY8 APOA1-AS-201ENST00000444200 563 ntTSL 4 BASIC13.19□□□□□ -0.3
CLN8Q9UBY8 TMPRSS11CP-201ENST00000453277 683 ntBASIC13.19□□□□□ -0.3
CLN8Q9UBY8 AC091133.3-201ENST00000504865 432 ntTSL 5 BASIC13.19□□□□□ -0.3
Retrieved 100 of 98,524 protein–RNA pairs in 78.4 ms