Protein–RNA interactions for Protein: Q9HBX3

SND1-IT1, Uncharacterized protein encoded by SND1-IT1, humanhuman

Predictions only

Length 110 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SND1-IT1Q9HBX3 SEZ6-201ENST00000317338 4471 ntAPPRIS P4 TSL 1 (best) BASIC10.49□□□□□ -0.73
SND1-IT1Q9HBX3 GTF2IRD1-203ENST00000455841 3315 ntTSL 1 (best) BASIC10.49□□□□□ -0.73
SND1-IT1Q9HBX3 TGFBR3-201ENST00000212355 6465 ntAPPRIS P3 TSL 1 (best) BASIC10.49□□□□□ -0.73
SND1-IT1Q9HBX3 MARVELD3-204ENST00000565261 1351 ntAPPRIS ALT2 TSL 1 (best) BASIC10.49□□□□□ -0.73
SND1-IT1Q9HBX3 SPATC1-202ENST00000447830 1795 ntAPPRIS ALT2 TSL 1 (best) BASIC10.49□□□□□ -0.73
SND1-IT1Q9HBX3 MAP2K7-201ENST00000397979 3361 ntAPPRIS P3 TSL 1 (best) BASIC10.49□□□□□ -0.73
SND1-IT1Q9HBX3 MIRLET7BHG-201ENST00000360737 4560 ntTSL 2 BASIC10.49□□□□□ -0.73
SND1-IT1Q9HBX3 ESS2-201ENST00000252137 5392 ntAPPRIS P1 TSL 1 (best) BASIC10.49□□□□□ -0.73
SND1-IT1Q9HBX3 LINC01230-201ENST00000625222 3017 ntBASIC10.49□□□□□ -0.73
SND1-IT1Q9HBX3 ZDHHC3-201ENST00000296127 3101 ntTSL 1 (best) BASIC10.49□□□□□ -0.73
SND1-IT1Q9HBX3 FAM98B-202ENST00000397609 4388 ntAPPRIS P2 TSL 5 BASIC10.49□□□□□ -0.73
SND1-IT1Q9HBX3 PPP1R13L-202ENST00000418234 3118 ntAPPRIS P1 TSL 1 (best) BASIC10.49□□□□□ -0.73
SND1-IT1Q9HBX3 DUS2-207ENST00000565263 2310 ntAPPRIS P1 TSL 1 (best) BASIC10.49□□□□□ -0.73
SND1-IT1Q9HBX3 ERN2-202ENST00000457008 3169 ntAPPRIS ALT2 TSL 1 (best) BASIC10.49□□□□□ -0.73
SND1-IT1Q9HBX3 TMEM92-201ENST00000300433 2767 ntAPPRIS P1 TSL 1 (best) BASIC10.48□□□□□ -0.73
SND1-IT1Q9HBX3 MAN1B1-202ENST00000371589 2769 ntAPPRIS P1 TSL 1 (best) BASIC10.48□□□□□ -0.73
SND1-IT1Q9HBX3 CALR-201ENST00000316448 1903 ntAPPRIS P1 TSL 1 (best) BASIC10.48□□□□□ -0.73
SND1-IT1Q9HBX3 MRC2-202ENST00000446119 3201 ntTSL 2 BASIC10.48□□□□□ -0.73
SND1-IT1Q9HBX3 SMIM5-201ENST00000375215 1546 ntAPPRIS P1 TSL 1 (best) BASIC10.48□□□□□ -0.73
SND1-IT1Q9HBX3 OSR2-209ENST00000522510 1528 ntAPPRIS P1 TSL 2 BASIC10.48□□□□□ -0.73
SND1-IT1Q9HBX3 SLC25A35-205ENST00000580340 1541 ntTSL 1 (best) BASIC10.48□□□□□ -0.73
SND1-IT1Q9HBX3 ABCC10-204ENST00000372530 5033 ntAPPRIS ALT2 TSL 2 BASIC10.48□□□□□ -0.73
SND1-IT1Q9HBX3 DSE-201ENST00000331677 7237 ntAPPRIS P1 TSL 5 BASIC10.48□□□□□ -0.73
SND1-IT1Q9HBX3 FGFR3-203ENST00000352904 3733 ntTSL 1 (best) BASIC10.48□□□□□ -0.73
SND1-IT1Q9HBX3 SHOX-201ENST00000334060 1951 ntTSL 5 BASIC10.48□□□□□ -0.73
SND1-IT1Q9HBX3 SLC22A12-203ENST00000377572 2887 ntTSL 1 (best) BASIC10.48□□□□□ -0.73
SND1-IT1Q9HBX3 NKIRAS2-201ENST00000307641 2948 ntAPPRIS P1 TSL 1 (best) BASIC10.48□□□□□ -0.73
SND1-IT1Q9HBX3 CAMK2B-208ENST00000395747 1557 ntTSL 1 (best) BASIC10.48□□□□□ -0.73
SND1-IT1Q9HBX3 ZNF365-207ENST00000410046 3379 ntTSL 2 BASIC10.48□□□□□ -0.73
SND1-IT1Q9HBX3 LHX6-207ENST00000541397 2942 ntTSL 2 BASIC10.48□□□□□ -0.73
SND1-IT1Q9HBX3 CACNA1C-211ENST00000399617 7482 ntAPPRIS ALT2 TSL 5 BASIC10.48□□□□□ -0.73
SND1-IT1Q9HBX3 PPP4R4-201ENST00000304338 3868 ntAPPRIS P1 TSL 1 (best) BASIC10.48□□□□□ -0.73
SND1-IT1Q9HBX3 XPO7-201ENST00000252512 4861 ntAPPRIS P1 TSL 1 (best) BASIC10.48□□□□□ -0.73
SND1-IT1Q9HBX3 REV3L-207ENST00000435970 10943 ntTSL 2 BASIC10.48□□□□□ -0.73
SND1-IT1Q9HBX3 PML-208ENST00000436891 3010 ntAPPRIS ALT2 TSL 5 BASIC10.48□□□□□ -0.73
SND1-IT1Q9HBX3 HNRNPLL-205ENST00000409636 3980 ntTSL 2 BASIC10.48□□□□□ -0.73
SND1-IT1Q9HBX3 LETMD1-203ENST00000418425 2123 ntTSL 2 BASIC10.48□□□□□ -0.73
SND1-IT1Q9HBX3 RPS6KC1-206ENST00000543354 4082 ntTSL 1 (best) BASIC10.48□□□□□ -0.73
SND1-IT1Q9HBX3 SYNGR2-207ENST00000590201 2239 ntTSL 5 BASIC10.48□□□□□ -0.73
SND1-IT1Q9HBX3 ADAM23-202ENST00000374415 2714 ntAPPRIS ALT1 TSL 5 BASIC10.48□□□□□ -0.73
SND1-IT1Q9HBX3 CAPN1-224ENST00000533129 2792 ntAPPRIS P1 TSL 5 BASIC10.48□□□□□ -0.73
SND1-IT1Q9HBX3 RNPS1-223ENST00000568631 1792 ntAPPRIS P1 TSL 5 BASIC10.48□□□□□ -0.73
SND1-IT1Q9HBX3 RSPH14-201ENST00000216036 1291 ntAPPRIS P1 TSL 1 (best) BASIC10.48□□□□□ -0.73
SND1-IT1Q9HBX3 S100A14-201ENST00000344616 1058 ntAPPRIS P1 TSL 1 (best) BASIC10.48□□□□□ -0.73
SND1-IT1Q9HBX3 INIP-202ENST00000374236 874 ntTSL 2 BASIC10.48□□□□□ -0.73
SND1-IT1Q9HBX3 FAM3A-205ENST00000393572 1041 ntTSL 2 BASIC10.48□□□□□ -0.73
SND1-IT1Q9HBX3 ODF3B-204ENST00000405135 917 ntTSL 5 BASIC10.48□□□□□ -0.73
SND1-IT1Q9HBX3 MRPL28-203ENST00000429738 310 ntTSL 2 BASIC10.48□□□□□ -0.73
SND1-IT1Q9HBX3 FIS1-203ENST00000442303 631 ntTSL 3 BASIC10.48□□□□□ -0.73
SND1-IT1Q9HBX3 TMEM205-202ENST00000447337 916 ntAPPRIS P1 TSL 2 BASIC10.48□□□□□ -0.73
SND1-IT1Q9HBX3 SLC26A4-AS1-202ENST00000449741 586 ntTSL 4 BASIC10.48□□□□□ -0.73
SND1-IT1Q9HBX3 AC108073.2-201ENST00000464002 357 ntBASIC10.48□□□□□ -0.73
SND1-IT1Q9HBX3 AC080013.1-201ENST00000495318 566 ntTSL 4 BASIC10.48□□□□□ -0.73
SND1-IT1Q9HBX3 PKD2-202ENST00000502363 1222 ntTSL 5 BASIC10.48□□□□□ -0.73
SND1-IT1Q9HBX3 AC105202.1-201ENST00000517833 995 ntTSL 3 BASIC10.48□□□□□ -0.73
SND1-IT1Q9HBX3 FCHSD1-204ENST00000519800 802 ntTSL 2 BASIC10.48□□□□□ -0.73
SND1-IT1Q9HBX3 CFL1-202ENST00000524553 860 ntTSL 2 BASIC10.48□□□□□ -0.73
SND1-IT1Q9HBX3 BAX-213ENST00000539787 458 ntTSL 1 (best) BASIC10.48□□□□□ -0.73
SND1-IT1Q9HBX3 CHRNB1-207ENST00000575379 1095 ntTSL 2 BASIC10.48□□□□□ -0.73
SND1-IT1Q9HBX3 AC138207.7-201ENST00000584499 668 ntTSL 5 BASIC10.48□□□□□ -0.73
SND1-IT1Q9HBX3 MIR4321-201ENST00000592276 80 ntBASIC10.48□□□□□ -0.73
SND1-IT1Q9HBX3 AC004790.2-201ENST00000623588 572 ntBASIC10.48□□□□□ -0.73
SND1-IT1Q9HBX3 CDC42EP4-209ENST00000630622 240 ntTSL 5 BASIC10.48□□□□□ -0.73
SND1-IT1Q9HBX3 PIP5K1C-202ENST00000537021 3326 ntAPPRIS ALT2 TSL 1 (best) BASIC10.48□□□□□ -0.73
SND1-IT1Q9HBX3 SYN2-205ENST00000620175 3871 ntTSL 1 (best) BASIC10.48□□□□□ -0.73
SND1-IT1Q9HBX3 AC140479.7-201ENST00000636301 2332 ntBASIC10.48□□□□□ -0.73
SND1-IT1Q9HBX3 PLEKHA8P1-201ENST00000256692 1839 ntTSL 1 (best) BASIC10.48□□□□□ -0.73
SND1-IT1Q9HBX3 AC041040.2-201ENST00000622926 2899 ntBASIC10.48□□□□□ -0.73
SND1-IT1Q9HBX3 ARHGEF37-201ENST00000333677 4968 ntAPPRIS P1 TSL 2 BASIC10.48□□□□□ -0.73
SND1-IT1Q9HBX3 ADRB2-201ENST00000305988 3443 ntAPPRIS P1 BASIC10.48□□□□□ -0.73
SND1-IT1Q9HBX3 HNRNPDL-210ENST00000630827 1318 ntAPPRIS ALT2 TSL 5 BASIC10.48□□□□□ -0.73
SND1-IT1Q9HBX3 ZKSCAN7-201ENST00000273320 3477 ntAPPRIS P1 TSL 1 (best) BASIC10.48□□□□□ -0.73
SND1-IT1Q9HBX3 RNF122-201ENST00000256257 1868 ntAPPRIS P1 TSL 1 (best) BASIC10.48□□□□□ -0.73
SND1-IT1Q9HBX3 INTS14-204ENST00000442903 1863 ntTSL 2 BASIC10.48□□□□□ -0.73
SND1-IT1Q9HBX3 SCARA5-201ENST00000354914 4026 ntAPPRIS P1 TSL 2 BASIC10.48□□□□□ -0.73
SND1-IT1Q9HBX3 ZNF772-204ENST00000427512 5130 ntTSL 1 (best) BASIC10.48□□□□□ -0.73
SND1-IT1Q9HBX3 PIK3R3-203ENST00000420542 5174 ntAPPRIS P1 TSL 1 (best) BASIC10.48□□□□□ -0.73
SND1-IT1Q9HBX3 ABCC6-201ENST00000205557 5747 ntAPPRIS P1 TSL 1 (best) BASIC10.48□□□□□ -0.73
SND1-IT1Q9HBX3 AGL-203ENST00000361915 7368 ntAPPRIS P1 TSL 1 (best) BASIC10.48□□□□□ -0.73
SND1-IT1Q9HBX3 EIF2B3-210ENST00000620860 1923 ntTSL 1 (best) BASIC10.48□□□□□ -0.73
SND1-IT1Q9HBX3 CUEDC1-206ENST00000577830 3621 ntAPPRIS P1 TSL 1 (best) BASIC10.48□□□□□ -0.73
SND1-IT1Q9HBX3 EEF1AKMT3-201ENST00000300209 2563 ntAPPRIS P1 TSL 1 (best) BASIC10.48□□□□□ -0.73
SND1-IT1Q9HBX3 DLX4-201ENST00000240306 2034 ntAPPRIS P1 TSL 1 (best) BASIC10.48□□□□□ -0.73
SND1-IT1Q9HBX3 PIGT-246ENST00000639499 2021 ntTSL 5 BASIC10.48□□□□□ -0.73
SND1-IT1Q9HBX3 KIAA0930-203ENST00000391627 2623 ntTSL 1 (best) BASIC10.48□□□□□ -0.73
SND1-IT1Q9HBX3 MEG9-201ENST00000429368 2638 ntTSL 2 BASIC10.48□□□□□ -0.73
SND1-IT1Q9HBX3 CLDN14-201ENST00000342108 1453 ntAPPRIS P1 TSL 1 (best) BASIC10.48□□□□□ -0.73
SND1-IT1Q9HBX3 NPM2-209ENST00000521157 1484 ntAPPRIS P2 TSL 5 BASIC10.48□□□□□ -0.73
SND1-IT1Q9HBX3 FP325330.2-201ENST00000624219 5630 ntBASIC10.48□□□□□ -0.73
SND1-IT1Q9HBX3 DUOX2-205ENST00000603300 6345 ntAPPRIS P2 TSL 1 (best) BASIC10.48□□□□□ -0.73
SND1-IT1Q9HBX3 PPIP5K1-209ENST00000420765 5718 ntAPPRIS ALT2 TSL 5 BASIC10.48□□□□□ -0.73
SND1-IT1Q9HBX3 FUK-202ENST00000378912 3925 ntTSL 2 BASIC10.48□□□□□ -0.73
SND1-IT1Q9HBX3 SUPT20H-201ENST00000350612 2739 ntAPPRIS ALT2 TSL 1 (best) BASIC10.48□□□□□ -0.73
SND1-IT1Q9HBX3 OSBP2-209ENST00000438716 2747 ntAPPRIS ALT2 TSL 2 BASIC10.48□□□□□ -0.73
SND1-IT1Q9HBX3 AL354714.1-201ENST00000356006 2136 ntTSL 1 (best) BASIC10.48□□□□□ -0.73
SND1-IT1Q9HBX3 HSD17B6-206ENST00000555159 1525 ntAPPRIS P1 TSL 5 BASIC10.48□□□□□ -0.73
SND1-IT1Q9HBX3 CCT3-201ENST00000295688 2150 ntAPPRIS P1 TSL 1 (best) BASIC10.48□□□□□ -0.73
SND1-IT1Q9HBX3 FAM218A-201ENST00000513876 2175 ntAPPRIS P1 BASIC10.48□□□□□ -0.73
SND1-IT1Q9HBX3 CHCHD3-201ENST00000262570 1598 ntAPPRIS P1 TSL 1 (best) BASIC10.48□□□□□ -0.73
SND1-IT1Q9HBX3 HPSE-206ENST00000512196 1571 ntTSL 1 (best) BASIC10.48□□□□□ -0.73
Retrieved 100 of 98,524 protein–RNA pairs in 90 ms