Protein–RNA interactions for Protein: Q9BZ76

CNTNAP3, Contactin-associated protein-like 3, humanhuman

Predictions only

Length 1,288 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CNTNAP3Q9BZ76 IQSEC3-203ENST00000538872 7094 ntAPPRIS ALT2 TSL 5 BASIC14.79□□□□□ -0.04
CNTNAP3Q9BZ76 AC005730.2-201ENST00000564549 1184 ntBASIC14.79□□□□□ -0.04
CNTNAP3Q9BZ76 SAMD11P1-201ENST00000571429 661 ntBASIC14.79□□□□□ -0.04
CNTNAP3Q9BZ76 POLR2E-204ENST00000586746 1096 ntAPPRIS P1 TSL 3 BASIC14.79□□□□□ -0.04
CNTNAP3Q9BZ76 AC010327.3-201ENST00000591665 1643 ntTSL 2 BASIC14.79□□□□□ -0.04
CNTNAP3Q9BZ76 MRPL37P1-201ENST00000592451 1337 ntBASIC14.79□□□□□ -0.04
CNTNAP3Q9BZ76 AC009950.1-210ENST00000594622 553 ntTSL 3 BASIC14.79□□□□□ -0.04
CNTNAP3Q9BZ76 AC018755.3-203ENST00000597710 411 ntTSL 3 BASIC14.79□□□□□ -0.04
CNTNAP3Q9BZ76 SIGLEC29P-201ENST00000599873 1114 ntBASIC14.79□□□□□ -0.04
CNTNAP3Q9BZ76 REXO1L8P-201ENST00000604378 1897 ntBASIC14.79□□□□□ -0.04
CNTNAP3Q9BZ76 TCTN1-229ENST00000614115 1965 ntTSL 5 BASIC14.79□□□□□ -0.04
CNTNAP3Q9BZ76 CLPTM1L-216ENST00000630539 2032 ntTSL 5 BASIC14.79□□□□□ -0.04
CNTNAP3Q9BZ76 LINC02537-201ENST00000635943 1367 ntTSL 4 BASIC14.79□□□□□ -0.04
CNTNAP3Q9BZ76 CTDP1-201ENST00000075430 3538 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
CNTNAP3Q9BZ76 CACNA1A-221ENST00000636012 7500 ntAPPRIS ALT2 TSL 5 BASIC14.79□□□□□ -0.04
CNTNAP3Q9BZ76 SCN3B-202ENST00000392770 6061 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
CNTNAP3Q9BZ76 LBX1-201ENST00000370193 2900 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
CNTNAP3Q9BZ76 CHST10-201ENST00000264249 2842 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
CNTNAP3Q9BZ76 ANAPC2-201ENST00000323927 2632 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
CNTNAP3Q9BZ76 SNX17-210ENST00000537606 2400 ntTSL 2 BASIC14.78□□□□□ -0.04
CNTNAP3Q9BZ76 ZNF385A-212ENST00000551109 2369 ntTSL 5 BASIC14.78□□□□□ -0.04
CNTNAP3Q9BZ76 PTPN5-202ENST00000396166 2299 ntTSL 2 BASIC14.78□□□□□ -0.04
CNTNAP3Q9BZ76 DMTN-223ENST00000523782 2235 ntAPPRIS P1 TSL 5 BASIC14.78□□□□□ -0.04
CNTNAP3Q9BZ76 LRRD1-201ENST00000343318 2073 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
CNTNAP3Q9BZ76 NKX2-2-201ENST00000377142 2092 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
CNTNAP3Q9BZ76 HNF1A-212ENST00000544413 2014 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
CNTNAP3Q9BZ76 DNAJC10-210ENST00000616986 5783 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
CNTNAP3Q9BZ76 AC063926.3-201ENST00000624734 5658 ntBASIC14.78□□□□□ -0.04
CNTNAP3Q9BZ76 EPHA8-201ENST00000166244 4943 ntAPPRIS P1 TSL 2 BASIC14.78□□□□□ -0.04
CNTNAP3Q9BZ76 BSG-202ENST00000346916 1605 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
CNTNAP3Q9BZ76 BSG-203ENST00000353555 1616 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
CNTNAP3Q9BZ76 GLIPR2-205ENST00000619700 1645 ntTSL 3 BASIC14.78□□□□□ -0.04
CNTNAP3Q9BZ76 CYP4F24P-201ENST00000586049 1580 ntBASIC14.78□□□□□ -0.04
CNTNAP3Q9BZ76 DUSP14-204ENST00000613659 1559 ntAPPRIS P1 TSL 2 BASIC14.78□□□□□ -0.04
CNTNAP3Q9BZ76 CHRDL1-205ENST00000482160 1537 ntTSL 2 BASIC14.78□□□□□ -0.04
CNTNAP3Q9BZ76 FAM53B-AS1-202ENST00000448422 1491 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
CNTNAP3Q9BZ76 SLC41A3-211ENST00000508835 1480 ntTSL 2 BASIC14.78□□□□□ -0.04
CNTNAP3Q9BZ76 SEC13-201ENST00000337354 1363 ntAPPRIS ALT1 TSL 1 (best) BASIC14.78□□□□□ -0.04
CNTNAP3Q9BZ76 SAP130-202ENST00000259235 4065 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
CNTNAP3Q9BZ76 ARL4C-202ENST00000390645 4013 ntAPPRIS P1 BASIC14.78□□□□□ -0.04
CNTNAP3Q9BZ76 RHOXF1-201ENST00000217999 769 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
CNTNAP3Q9BZ76 RPS9-201ENST00000302907 829 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
CNTNAP3Q9BZ76 SNX15-201ENST00000352068 771 ntTSL 5 BASIC14.78□□□□□ -0.04
CNTNAP3Q9BZ76 PPIE-202ENST00000356511 1079 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
CNTNAP3Q9BZ76 MRPL43-206ENST00000370236 866 ntAPPRIS P1 TSL 2 BASIC14.78□□□□□ -0.04
CNTNAP3Q9BZ76 MRPL43-207ENST00000370241 824 ntTSL 5 BASIC14.78□□□□□ -0.04
CNTNAP3Q9BZ76 POLR2H-203ENST00000430783 1159 ntTSL 2 BASIC14.78□□□□□ -0.04
CNTNAP3Q9BZ76 AC092535.3-201ENST00000504969 468 ntTSL 3 BASIC14.78□□□□□ -0.04
CNTNAP3Q9BZ76 VDAC3-211ENST00000522572 799 ntTSL 5 BASIC14.78□□□□□ -0.04
CNTNAP3Q9BZ76 AP001582.1-201ENST00000525856 295 ntBASIC14.78□□□□□ -0.04
CNTNAP3Q9BZ76 FGFR1OP2-206ENST00000546072 956 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
CNTNAP3Q9BZ76 AC027139.1-201ENST00000565286 951 ntBASIC14.78□□□□□ -0.04
CNTNAP3Q9BZ76 UBA52-208ENST00000596304 554 ntAPPRIS P1 TSL 5 BASIC14.78□□□□□ -0.04
CNTNAP3Q9BZ76 RDM1-220ENST00000616596 1032 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
CNTNAP3Q9BZ76 RDM1-228ENST00000620284 1177 ntAPPRIS P3 TSL 1 (best) BASIC14.78□□□□□ -0.04
CNTNAP3Q9BZ76 AL805961.1-203ENST00000641078 1258 ntBASIC14.78□□□□□ -0.04
CNTNAP3Q9BZ76 SMC4-204ENST00000462787 5033 ntTSL 2 BASIC14.78□□□□□ -0.04
CNTNAP3Q9BZ76 SLC52A1-202ENST00000424747 2412 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
CNTNAP3Q9BZ76 MYEOV-203ENST00000535407 2306 ntAPPRIS ALT2 TSL 2 BASIC14.78□□□□□ -0.04
CNTNAP3Q9BZ76 INPP5J-213ENST00000620191 2306 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
CNTNAP3Q9BZ76 SH3BP2-207ENST00000503393 9158 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
CNTNAP3Q9BZ76 KLHL42-201ENST00000381271 6703 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
CNTNAP3Q9BZ76 CYP2R1-201ENST00000334636 2235 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
CNTNAP3Q9BZ76 AGGF1P2-201ENST00000426656 2106 ntBASIC14.78□□□□□ -0.04
CNTNAP3Q9BZ76 PCDHA3-201ENST00000522353 5260 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
CNTNAP3Q9BZ76 VAC14-201ENST00000261776 3099 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
CNTNAP3Q9BZ76 WLS-202ENST00000354777 2037 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
CNTNAP3Q9BZ76 GRIN2C-202ENST00000347612 2929 ntAPPRIS ALT2 TSL 1 (best) BASIC14.78□□□□□ -0.04
CNTNAP3Q9BZ76 IL12RB1-201ENST00000322153 1902 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
CNTNAP3Q9BZ76 PRSS16-201ENST00000230582 2716 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
CNTNAP3Q9BZ76 CLIP4-201ENST00000320081 4293 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
CNTNAP3Q9BZ76 CD244-203ENST00000368034 2463 ntAPPRIS P3 TSL 1 (best) BASIC14.77□□□□□ -0.04
CNTNAP3Q9BZ76 SLC30A4-201ENST00000261867 7157 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
CNTNAP3Q9BZ76 PCDHA14-201ENST00000506751 2298 ntBASIC14.77□□□□□ -0.04
CNTNAP3Q9BZ76 HRASLS5-206ENST00000540857 3032 ntAPPRIS ALT2 TSL 1 (best) BASIC14.77□□□□□ -0.04
CNTNAP3Q9BZ76 FOXD4L4-201ENST00000377413 2230 ntAPPRIS P1 BASIC14.77□□□□□ -0.04
CNTNAP3Q9BZ76 CTSL-203ENST00000343150 2177 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
CNTNAP3Q9BZ76 SHTN1-203ENST00000392901 2190 ntAPPRIS ALT2 TSL 2 BASIC14.77□□□□□ -0.04
CNTNAP3Q9BZ76 FOXRED2-203ENST00000397223 2184 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
CNTNAP3Q9BZ76 TTBK1-201ENST00000259750 6932 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
CNTNAP3Q9BZ76 UNC119-204ENST00000470125 2050 ntTSL 1 (best) BASIC14.77□□□□□ -0.04
CNTNAP3Q9BZ76 PIGP-207ENST00000464265 3437 ntTSL 1 (best) BASIC14.77□□□□□ -0.04
CNTNAP3Q9BZ76 SEC23A-203ENST00000545328 2734 ntTSL 2 BASIC14.77□□□□□ -0.04
CNTNAP3Q9BZ76 AP2A2-201ENST00000332231 4656 ntAPPRIS ALT1 TSL 1 (best) BASIC14.77□□□□□ -0.04
CNTNAP3Q9BZ76 HDAC5-201ENST00000225983 5326 ntAPPRIS P3 TSL 5 BASIC14.77□□□□□ -0.04
CNTNAP3Q9BZ76 CGB5-201ENST00000301408 841 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
CNTNAP3Q9BZ76 OR9I1-201ENST00000302610 945 ntAPPRIS P1 BASIC14.77□□□□□ -0.05
CNTNAP3Q9BZ76 CELA3B-201ENST00000337107 897 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
CNTNAP3Q9BZ76 VMO1-203ENST00000416307 712 ntTSL 2 BASIC14.77□□□□□ -0.05
CNTNAP3Q9BZ76 DMAC2-203ENST00000417807 1065 ntTSL 2 BASIC14.77□□□□□ -0.05
CNTNAP3Q9BZ76 SIX3-AS1-202ENST00000456467 557 ntTSL 2 BASIC14.77□□□□□ -0.05
CNTNAP3Q9BZ76 AC133961.1-201ENST00000503085 762 ntTSL 3 BASIC14.77□□□□□ -0.05
CNTNAP3Q9BZ76 ATP2A1-AS1-201ENST00000561547 558 ntTSL 2 BASIC14.77□□□□□ -0.05
CNTNAP3Q9BZ76 HKR1-225ENST00000592168 566 ntTSL 4 BASIC14.77□□□□□ -0.05
CNTNAP3Q9BZ76 GLIDR-205ENST00000640674 884 ntTSL 5 BASIC14.77□□□□□ -0.05
CNTNAP3Q9BZ76 PRMT2-208ENST00000451211 1878 ntTSL 1 (best) BASIC14.77□□□□□ -0.05
CNTNAP3Q9BZ76 CABP1-204ENST00000453000 1857 ntTSL 1 (best) BASIC14.77□□□□□ -0.05
CNTNAP3Q9BZ76 ARHGEF5-202ENST00000471847 1862 ntAPPRIS ALT2 TSL 1 (best) BASIC14.77□□□□□ -0.05
CNTNAP3Q9BZ76 EZR-202ENST00000367075 3096 ntAPPRIS P2 TSL 1 (best) BASIC14.77□□□□□ -0.05
CNTNAP3Q9BZ76 PON2-201ENST00000222572 1745 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
Retrieved 100 of 98,524 protein–RNA pairs in 40.2 ms