Protein–RNA interactions for Protein: Q9BV40

VAMP8, Vesicle-associated membrane protein 8, humanhuman

Predictions only

Length 100 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VAMP8Q9BV40 RIN3-212ENST00000620541 3617 ntAPPRIS ALT2 TSL 5 BASIC11.34□□□□□ -0.59
VAMP8Q9BV40 PCDHGA12-201ENST00000252085 4747 ntAPPRIS P3 TSL 1 (best) BASIC11.34□□□□□ -0.59
VAMP8Q9BV40 TMEM26-202ENST00000399298 5151 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
VAMP8Q9BV40 AATBC-203ENST00000448247 1889 ntTSL 2 BASIC11.34□□□□□ -0.59
VAMP8Q9BV40 MTMR4-204ENST00000579925 5622 ntTSL 5 BASIC11.34□□□□□ -0.59
VAMP8Q9BV40 ATXN2L-205ENST00000395547 3981 ntAPPRIS P4 TSL 1 (best) BASIC11.34□□□□□ -0.59
VAMP8Q9BV40 WT1-AS-205ENST00000494911 1320 ntTSL 4 BASIC11.34□□□□□ -0.59
VAMP8Q9BV40 LIX1L-201ENST00000604000 3975 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
VAMP8Q9BV40 TCF12-201ENST00000267811 6061 ntAPPRIS ALT1 TSL 1 (best) BASIC11.34□□□□□ -0.59
VAMP8Q9BV40 TRIM26-267ENST00000453195 3318 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
VAMP8Q9BV40 SLC35A4-203ENST00000612662 2657 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.59
VAMP8Q9BV40 TMEM120B-204ENST00000449592 7461 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
VAMP8Q9BV40 UBE2I-204ENST00000397515 3109 ntAPPRIS P1 TSL 3 BASIC11.33□□□□□ -0.6
VAMP8Q9BV40 ZBTB7B-203ENST00000417934 4017 ntAPPRIS ALT2 TSL 2 BASIC11.33□□□□□ -0.6
VAMP8Q9BV40 ACTN1-204ENST00000438964 3043 ntTSL 1 (best) BASIC11.33□□□□□ -0.6
VAMP8Q9BV40 ARPC1B-201ENST00000252725 1551 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
VAMP8Q9BV40 CTDP1-202ENST00000299543 3380 ntAPPRIS ALT2 TSL 5 BASIC11.33□□□□□ -0.6
VAMP8Q9BV40 SCAF4-201ENST00000286835 4193 ntAPPRIS P3 TSL 1 (best) BASIC11.33□□□□□ -0.6
VAMP8Q9BV40 GPA33-201ENST00000367868 2802 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
VAMP8Q9BV40 AGAP5-201ENST00000374094 2394 ntAPPRIS P2 TSL 1 (best) BASIC11.33□□□□□ -0.6
VAMP8Q9BV40 KIAA0319-205ENST00000543707 5314 ntAPPRIS P3 TSL 5 BASIC11.33□□□□□ -0.6
VAMP8Q9BV40 KTN1-AS1-201ENST00000335142 1465 ntTSL 1 (best) BASIC11.33□□□□□ -0.6
VAMP8Q9BV40 KRT89P-201ENST00000620027 1478 ntBASIC11.33□□□□□ -0.6
VAMP8Q9BV40 OR4K13-203ENST00000641904 5684 ntAPPRIS P1 BASIC11.33□□□□□ -0.6
VAMP8Q9BV40 ACSM2A-202ENST00000396104 2734 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
VAMP8Q9BV40 LARGE1-203ENST00000402320 3955 ntTSL 1 (best) BASIC11.33□□□□□ -0.6
VAMP8Q9BV40 KDM3A-216ENST00000542128 4311 ntTSL 5 BASIC11.33□□□□□ -0.6
VAMP8Q9BV40 CAMTA2-204ENST00000414043 4589 ntTSL 1 (best) BASIC11.33□□□□□ -0.6
VAMP8Q9BV40 PPP2R5C-204ENST00000422945 4481 ntTSL 2 BASIC11.33□□□□□ -0.6
VAMP8Q9BV40 C17orf53-203ENST00000585683 2529 ntAPPRIS ALT2 TSL 2 BASIC11.33□□□□□ -0.6
VAMP8Q9BV40 AMER1-202ENST00000374869 3688 ntTSL 5 BASIC11.33□□□□□ -0.6
VAMP8Q9BV40 HMOX2-216ENST00000613539 1703 ntTSL 5 BASIC11.33□□□□□ -0.6
VAMP8Q9BV40 ARHGAP4-201ENST00000350060 3235 ntAPPRIS P3 TSL 1 (best) BASIC11.33□□□□□ -0.6
VAMP8Q9BV40 FLNA-204ENST00000369856 8241 ntAPPRIS ALT2 TSL 1 (best) BASIC11.33□□□□□ -0.6
VAMP8Q9BV40 CDC42EP5-201ENST00000301200 864 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
VAMP8Q9BV40 CMTM8-201ENST00000307526 1174 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
VAMP8Q9BV40 MRPL53-202ENST00000409710 386 ntTSL 2 BASIC11.33□□□□□ -0.6
VAMP8Q9BV40 RPS2P4-201ENST00000476944 856 ntBASIC11.33□□□□□ -0.6
VAMP8Q9BV40 ZNF324-202ENST00000535298 1006 ntTSL 5 BASIC11.33□□□□□ -0.6
VAMP8Q9BV40 AC004801.5-202ENST00000546804 530 ntTSL 4 BASIC11.33□□□□□ -0.6
VAMP8Q9BV40 HLX-AS1-201ENST00000552026 563 ntTSL 4 BASIC11.33□□□□□ -0.6
VAMP8Q9BV40 AL157871.1-202ENST00000556458 478 ntTSL 5 BASIC11.33□□□□□ -0.6
VAMP8Q9BV40 AC140479.4-201ENST00000561715 463 ntTSL 4 BASIC11.33□□□□□ -0.6
VAMP8Q9BV40 AC133552.2-202ENST00000575694 574 ntBASIC11.33□□□□□ -0.6
VAMP8Q9BV40 LRRC75A-AS1-225ENST00000581913 1091 ntTSL 2 BASIC11.33□□□□□ -0.6
VAMP8Q9BV40 C6orf48-210ENST00000614363 748 ntAPPRIS P1 TSL 5 BASIC11.33□□□□□ -0.6
VAMP8Q9BV40 OGFR-204ENST00000621591 1194 ntTSL 5 BASIC11.33□□□□□ -0.6
VAMP8Q9BV40 ADAMTSL4-202ENST00000369038 4167 ntAPPRIS P3 TSL 1 (best) BASIC11.33□□□□□ -0.6
VAMP8Q9BV40 RGN-202ENST00000352078 1611 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
VAMP8Q9BV40 PAX8-204ENST00000397647 3633 ntTSL 1 (best) BASIC11.33□□□□□ -0.6
VAMP8Q9BV40 SLC2A9-202ENST00000309065 1866 ntAPPRIS ALT2 TSL 1 (best) BASIC11.33□□□□□ -0.6
VAMP8Q9BV40 ZNF446-201ENST00000335841 1889 ntTSL 5 BASIC11.33□□□□□ -0.6
VAMP8Q9BV40 ARID3B-206ENST00000622429 4243 ntAPPRIS ALT2 TSL 1 (best) BASIC11.33□□□□□ -0.6
VAMP8Q9BV40 TRIM46-205ENST00000392451 3195 ntTSL 2 BASIC11.33□□□□□ -0.6
VAMP8Q9BV40 RTL10-201ENST00000328554 6619 ntAPPRIS P2 TSL 1 (best) BASIC11.33□□□□□ -0.6
VAMP8Q9BV40 PIK3CD-202ENST00000377346 5203 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
VAMP8Q9BV40 CCNC-207ENST00000518714 1426 ntTSL 5 BASIC11.33□□□□□ -0.6
VAMP8Q9BV40 FAM90A12P-201ENST00000519497 2375 ntBASIC11.33□□□□□ -0.6
VAMP8Q9BV40 FAM90A24P-201ENST00000520792 2369 ntBASIC11.33□□□□□ -0.6
VAMP8Q9BV40 RBM10-201ENST00000329236 3201 ntAPPRIS ALT2 TSL 1 (best) BASIC11.33□□□□□ -0.6
VAMP8Q9BV40 TOR1AIP1-212ENST00000606911 8704 ntAPPRIS P3 TSL 1 (best) BASIC11.33□□□□□ -0.6
VAMP8Q9BV40 BDH1-202ENST00000392378 3455 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
VAMP8Q9BV40 CNTNAP5-202ENST00000431078 5284 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
VAMP8Q9BV40 RNGTT-202ENST00000369485 4553 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
VAMP8Q9BV40 MTSS1-201ENST00000325064 2777 ntTSL 2 BASIC11.33□□□□□ -0.6
VAMP8Q9BV40 DYSF-208ENST00000410020 6657 ntAPPRIS ALT2 TSL 1 (best) BASIC11.33□□□□□ -0.6
VAMP8Q9BV40 MAGEL2-201ENST00000532292 4298 ntAPPRIS P1 BASIC11.32□□□□□ -0.6
VAMP8Q9BV40 TMED9-201ENST00000332598 1473 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
VAMP8Q9BV40 AC099489.1-203ENST00000598234 10568 ntAPPRIS P1 TSL 5 BASIC11.32□□□□□ -0.6
VAMP8Q9BV40 COG1-201ENST00000299886 3079 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
VAMP8Q9BV40 AC018529.2-202ENST00000611482 3087 ntBASIC11.32□□□□□ -0.6
VAMP8Q9BV40 DNMT3L-201ENST00000270172 1706 ntAPPRIS P3 TSL 1 (best) BASIC11.32□□□□□ -0.6
VAMP8Q9BV40 AAAS-202ENST00000394384 1703 ntTSL 1 (best) BASIC11.32□□□□□ -0.6
VAMP8Q9BV40 LINC01544-201ENST00000567801 5168 ntTSL 2 BASIC11.32□□□□□ -0.6
VAMP8Q9BV40 PLEKHA2-208ENST00000616927 1748 ntTSL 5 BASIC11.32□□□□□ -0.6
VAMP8Q9BV40 ZBTB42-201ENST00000342537 3800 ntAPPRIS P1 BASIC11.32□□□□□ -0.6
VAMP8Q9BV40 MKX-201ENST00000375790 3846 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
VAMP8Q9BV40 VDAC1-201ENST00000265333 1953 ntAPPRIS P1 TSL 2 BASIC11.32□□□□□ -0.6
VAMP8Q9BV40 AC011455.3-201ENST00000599996 1967 ntAPPRIS P1 TSL 2 BASIC11.32□□□□□ -0.6
VAMP8Q9BV40 RALGAPB-201ENST00000262879 8663 ntAPPRIS P3 TSL 1 (best) BASIC11.32□□□□□ -0.6
VAMP8Q9BV40 RALGAPB-203ENST00000397042 8652 ntAPPRIS ALT1 TSL 1 (best) BASIC11.32□□□□□ -0.6
VAMP8Q9BV40 MED16-202ENST00000312090 3229 ntAPPRIS ALT2 TSL 1 (best) BASIC11.32□□□□□ -0.6
VAMP8Q9BV40 SLC38A7-201ENST00000219320 4392 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
VAMP8Q9BV40 DNAJC28-201ENST00000314399 1625 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
VAMP8Q9BV40 FAM187A-201ENST00000331733 3397 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
VAMP8Q9BV40 TOR2A-201ENST00000336067 1370 ntTSL 2 BASIC11.32□□□□□ -0.6
VAMP8Q9BV40 AOC1-201ENST00000360937 2649 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
VAMP8Q9BV40 PHACTR2-202ENST00000367582 4367 ntAPPRIS ALT2 TSL 1 (best) BASIC11.32□□□□□ -0.6
VAMP8Q9BV40 NTNG1-206ENST00000370071 3149 ntTSL 5 BASIC11.32□□□□□ -0.6
VAMP8Q9BV40 KCNK7-204ENST00000394217 1372 ntTSL 1 (best) BASIC11.32□□□□□ -0.6
VAMP8Q9BV40 TIGD1-201ENST00000408957 2625 ntAPPRIS P1 BASIC11.32□□□□□ -0.6
VAMP8Q9BV40 CCDC103-204ENST00000417826 3397 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
VAMP8Q9BV40 JPT1-209ENST00000482348 1614 ntTSL 1 (best) BASIC11.32□□□□□ -0.6
VAMP8Q9BV40 KCNMA1-285ENST00000640605 3864 ntAPPRIS ALT2 TSL 5 BASIC11.32□□□□□ -0.6
VAMP8Q9BV40 PTK7-205ENST00000352931 4023 ntTSL 1 (best) BASIC11.32□□□□□ -0.6
VAMP8Q9BV40 KCNMA1-210ENST00000404771 4014 ntAPPRIS ALT2 TSL 5 BASIC11.32□□□□□ -0.6
VAMP8Q9BV40 AOC4P-203ENST00000566825 2289 ntBASIC11.32□□□□□ -0.6
VAMP8Q9BV40 FN1-201ENST00000323926 8708 ntTSL 1 (best) BASIC11.32□□□□□ -0.6
VAMP8Q9BV40 WLS-202ENST00000354777 2037 ntTSL 1 (best) BASIC11.32□□□□□ -0.6
VAMP8Q9BV40 KCTD9-201ENST00000221200 3401 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Retrieved 100 of 98,524 protein–RNA pairs in 39.1 ms