Protein–RNA interactions for Protein: Q96RK4

BBS4, Bardet-Biedl syndrome 4 protein, humanhuman

Predictions only

Length 519 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BBS4Q96RK4 CAST-224ENST00000508830 2539 ntAPPRIS ALT2 TSL 5 BASIC14.8□□□□□ -0.04
BBS4Q96RK4 MAPKBP1-215ENST00000514566 5394 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
BBS4Q96RK4 POMT1-205ENST00000404875 2821 ntTSL 2 BASIC14.79□□□□□ -0.04
BBS4Q96RK4 CAPN2-201ENST00000295006 3573 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
BBS4Q96RK4 GUCD1-206ENST00000435822 3613 ntAPPRIS ALT1 TSL 1 (best) BASIC14.79□□□□□ -0.04
BBS4Q96RK4 UGT8-201ENST00000310836 4084 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
BBS4Q96RK4 GAK-201ENST00000314167 4442 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
BBS4Q96RK4 BAG4-201ENST00000287322 4453 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
BBS4Q96RK4 MYH11-201ENST00000300036 6029 ntAPPRIS P3 TSL 1 (best) BASIC14.79□□□□□ -0.04
BBS4Q96RK4 SF3A2-201ENST00000221494 1963 ntAPPRIS P2 TSL 1 (best) BASIC14.79□□□□□ -0.04
BBS4Q96RK4 PDCD2L-201ENST00000246535 1171 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
BBS4Q96RK4 DNAJB9-201ENST00000249356 2715 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
BBS4Q96RK4 NUMBL-201ENST00000252891 3561 ntAPPRIS P3 TSL 1 (best) BASIC14.79□□□□□ -0.04
BBS4Q96RK4 KRT82-201ENST00000257974 2664 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
BBS4Q96RK4 CCDC105-201ENST00000292574 1732 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
BBS4Q96RK4 C3orf67-201ENST00000295966 2650 ntTSL 2 BASIC14.79□□□□□ -0.04
BBS4Q96RK4 LFNG-202ENST00000338732 1968 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
BBS4Q96RK4 SERHL2-203ENST00000340239 1315 ntTSL 5 BASIC14.79□□□□□ -0.04
BBS4Q96RK4 SLC6A13-201ENST00000343164 2185 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
BBS4Q96RK4 SUV39H2-202ENST00000354919 1233 ntAPPRIS ALT2 TSL 5 BASIC14.79□□□□□ -0.04
BBS4Q96RK4 LINGO1-201ENST00000355300 3055 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
BBS4Q96RK4 STRN3-201ENST00000355683 3970 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
BBS4Q96RK4 MFSD14B-201ENST00000375344 3420 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
BBS4Q96RK4 LINC02138-201ENST00000378340 1326 ntTSL 2 BASIC14.79□□□□□ -0.04
BBS4Q96RK4 RETN-202ENST00000381324 249 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
BBS4Q96RK4 SYNPO2L-202ENST00000394810 4921 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
BBS4Q96RK4 MIEF2-203ENST00000395704 2879 ntTSL 2 BASIC14.79□□□□□ -0.04
BBS4Q96RK4 LBH-203ENST00000404397 543 ntTSL 4 BASIC14.79□□□□□ -0.04
BBS4Q96RK4 CHMP3-203ENST00000409225 1099 ntTSL 2 BASIC14.79□□□□□ -0.04
BBS4Q96RK4 YAE1D1-202ENST00000432096 968 ntTSL 2 BASIC14.79□□□□□ -0.04
BBS4Q96RK4 MLF1-210ENST00000484955 1247 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
BBS4Q96RK4 SCLT1-204ENST00000503215 1364 ntAPPRIS ALT2 TSL 1 (best) BASIC14.79□□□□□ -0.04
BBS4Q96RK4 SLED1-202ENST00000512051 380 ntBASIC14.79□□□□□ -0.04
BBS4Q96RK4 FLJ42969-201ENST00000514926 1948 ntTSL 2 BASIC14.79□□□□□ -0.04
BBS4Q96RK4 NDUFA4L2-202ENST00000554503 1177 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
BBS4Q96RK4 AL162231.3-201ENST00000556278 902 ntAPPRIS P1 TSL 5 BASIC14.79□□□□□ -0.04
BBS4Q96RK4 AC018558.2-201ENST00000566562 480 ntTSL 3 BASIC14.79□□□□□ -0.04
BBS4Q96RK4 AC051619.7-201ENST00000568314 623 ntBASIC14.79□□□□□ -0.04
BBS4Q96RK4 AL031717.1-201ENST00000569670 565 ntTSL 4 BASIC14.79□□□□□ -0.04
BBS4Q96RK4 AC007216.4-201ENST00000574364 562 ntTSL 4 BASIC14.79□□□□□ -0.04
BBS4Q96RK4 AC015911.4-201ENST00000588022 1070 ntBASIC14.79□□□□□ -0.04
BBS4Q96RK4 AC025048.3-201ENST00000590609 569 ntBASIC14.79□□□□□ -0.04
BBS4Q96RK4 LONP1-213ENST00000590729 2626 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
BBS4Q96RK4 ZNF550-208ENST00000601415 515 ntTSL 4 BASIC14.79□□□□□ -0.04
BBS4Q96RK4 AL136531.2-202ENST00000617804 573 ntAPPRIS P1 TSL 4 BASIC14.79□□□□□ -0.04
BBS4Q96RK4 MALAT1-213ENST00000618227 593 ntTSL 3 BASIC14.79□□□□□ -0.04
BBS4Q96RK4 AC005702.4-201ENST00000618393 416 ntBASIC14.79□□□□□ -0.04
BBS4Q96RK4 WDR45-240ENST00000635003 1376 ntTSL 3 BASIC14.79□□□□□ -0.04
BBS4Q96RK4 SYNRG-217ENST00000612223 8229 ntAPPRIS P4 TSL 1 (best) BASIC14.79□□□□□ -0.04
BBS4Q96RK4 FZD5-201ENST00000295417 6708 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
BBS4Q96RK4 NUDT16-202ENST00000521288 6108 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
BBS4Q96RK4 ELP1-201ENST00000374647 5905 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
BBS4Q96RK4 TLL1-201ENST00000061240 6708 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
BBS4Q96RK4 CHTF18-205ENST00000455171 3172 ntAPPRIS ALT2 TSL 2 BASIC14.79□□□□□ -0.04
BBS4Q96RK4 CKAP4-201ENST00000378026 3093 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
BBS4Q96RK4 KCNC2-207ENST00000548513 3026 ntAPPRIS ALT2 TSL 1 (best) BASIC14.79□□□□□ -0.04
BBS4Q96RK4 AP000866.1-201ENST00000499143 2886 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
BBS4Q96RK4 RUFY2-204ENST00000399200 2685 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
BBS4Q96RK4 TPCN1-214ENST00000550785 5345 ntTSL 2 BASIC14.79□□□□□ -0.04
BBS4Q96RK4 ASF1A-201ENST00000229595 2362 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
BBS4Q96RK4 NOX5-204ENST00000455873 2277 ntAPPRIS ALT2 TSL 1 (best) BASIC14.78□□□□□ -0.04
BBS4Q96RK4 SHANK2-204ENST00000409530 2123 ntTSL 5 BASIC14.78□□□□□ -0.04
BBS4Q96RK4 PEPD-201ENST00000244137 1910 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
BBS4Q96RK4 PPHLN1-201ENST00000256678 1820 ntTSL 2 BASIC14.78□□□□□ -0.04
BBS4Q96RK4 AL034550.2-201ENST00000620523 1771 ntTSL 2 BASIC14.78□□□□□ -0.04
BBS4Q96RK4 NIPAL3-204ENST00000374399 1711 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
BBS4Q96RK4 CFLAR-205ENST00000342795 1613 ntTSL 5 BASIC14.78□□□□□ -0.04
BBS4Q96RK4 SYN1-202ENST00000340666 3172 ntAPPRIS ALT2 TSL 1 (best) BASIC14.78□□□□□ -0.04
BBS4Q96RK4 PTGES3-202ENST00000414274 1547 ntTSL 2 BASIC14.78□□□□□ -0.04
BBS4Q96RK4 SMAD2-202ENST00000356825 10445 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
BBS4Q96RK4 CCDC28A-201ENST00000332797 1496 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
BBS4Q96RK4 MZF1-201ENST00000215057 2905 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
BBS4Q96RK4 TFAP2C-201ENST00000201031 2866 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
BBS4Q96RK4 GRSF1-208ENST00000545193 2682 ntTSL 2 BASIC14.78□□□□□ -0.04
BBS4Q96RK4 AC073264.3-201ENST00000636941 2577 ntAPPRIS P1 TSL 5 BASIC14.78□□□□□ -0.04
BBS4Q96RK4 C2orf40-201ENST00000238044 789 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
BBS4Q96RK4 AL157935.1-209ENST00000415141 1105 ntTSL 2 BASIC14.78□□□□□ -0.04
BBS4Q96RK4 NECAP2-203ENST00000457722 935 ntTSL 2 BASIC14.78□□□□□ -0.04
BBS4Q96RK4 IGHV3-42-201ENST00000520410 361 ntBASIC14.78□□□□□ -0.04
BBS4Q96RK4 AC008750.1-201ENST00000532473 492 ntTSL 3 BASIC14.78□□□□□ -0.04
BBS4Q96RK4 MAPKAPK5-203ENST00000547305 494 ntTSL 2 BASIC14.78□□□□□ -0.04
BBS4Q96RK4 AL512361.1-201ENST00000554200 418 ntBASIC14.78□□□□□ -0.04
BBS4Q96RK4 AC027088.1-201ENST00000557966 1117 ntTSL 2 BASIC14.78□□□□□ -0.04
BBS4Q96RK4 AC087741.1-202ENST00000573346 801 ntTSL 3 BASIC14.78□□□□□ -0.04
BBS4Q96RK4 YPEL2-205ENST00000585166 881 ntAPPRIS P1 TSL 5 BASIC14.78□□□□□ -0.04
BBS4Q96RK4 SEC11C-205ENST00000588875 718 ntTSL 2 BASIC14.78□□□□□ -0.04
BBS4Q96RK4 AC016168.1-201ENST00000591422 722 ntTSL 3 BASIC14.78□□□□□ -0.04
BBS4Q96RK4 LINC00237-203ENST00000593272 630 ntTSL 4 BASIC14.78□□□□□ -0.04
BBS4Q96RK4 KLK15-203ENST00000596931 692 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
BBS4Q96RK4 JAKMIP1-204ENST00000409831 2371 ntAPPRIS P1 TSL 2 BASIC14.78□□□□□ -0.04
BBS4Q96RK4 CREB3L2-204ENST00000456390 2360 ntTSL 2 BASIC14.78□□□□□ -0.04
BBS4Q96RK4 PLTP-205ENST00000477313 2255 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
BBS4Q96RK4 DEGS2-201ENST00000305631 4352 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
BBS4Q96RK4 SCUBE1-202ENST00000360835 9808 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
BBS4Q96RK4 HYAL2-201ENST00000357750 2055 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
BBS4Q96RK4 TRPM2-AS-202ENST00000456880 2056 ntTSL 2 BASIC14.78□□□□□ -0.04
BBS4Q96RK4 HECW1-203ENST00000453890 5169 ntAPPRIS ALT2 TSL 2 BASIC14.78□□□□□ -0.04
BBS4Q96RK4 YTHDF3-216ENST00000623280 5193 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
BBS4Q96RK4 POM121-202ENST00000395270 7011 ntAPPRIS ALT2 TSL 1 (best) BASIC14.78□□□□□ -0.04
BBS4Q96RK4 PRICKLE1-201ENST00000345127 5902 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Retrieved 100 of 98,524 protein–RNA pairs in 71.3 ms